RNA–Protein interactions for RNA: ENST00000470278.5

CDC42SE1-203, Transcript of CDC42 small effector 1, humanhuman

TSL 5

Gene CDC42SE1, Length 939 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-203ENST00000470278 MRC1P22897 1456 aa19.82■□□□□ 0.76
CDC42SE1-203ENST00000470278 ITGB4P16144 1822 aa19.82■□□□□ 0.76
CDC42SE1-203ENST00000470278 STK32BQ9NY57 414 aa19.82■□□□□ 0.76
CDC42SE1-203ENST00000470278 ADAMTS8Q9UP79 889 aa19.82■□□□□ 0.76
CDC42SE1-203ENST00000470278 MAP3K5Q99683 1374 aa19.82■□□□□ 0.76
CDC42SE1-203ENST00000470278 NEFMP07197 916 aa19.81■□□□□ 0.76
CDC42SE1-203ENST00000470278 DCAF5Q96JK2 942 aa19.81■□□□□ 0.76
CDC42SE1-203ENST00000470278 DLG5Q8TDM6 1919 aa19.8■□□□□ 0.76
CDC42SE1-203ENST00000470278 MAPK8IP3Q9UPT6 1336 aa19.8■□□□□ 0.76
CDC42SE1-203ENST00000470278 FHDC1Q9C0D6 1143 aaPredicted RBP19.79■□□□□ 0.76
CDC42SE1-203ENST00000470278 TAF1LQ8IZX4 1826 aa19.79■□□□□ 0.76
CDC42SE1-203ENST00000470278 AKT1S1Q96B36 256 aa19.78■□□□□ 0.76
CDC42SE1-203ENST00000470278 RUNDC1Q96C34 613 aa19.78■□□□□ 0.76
CDC42SE1-203ENST00000470278 MTFR1LQ9H019 292 aa19.78■□□□□ 0.76
CDC42SE1-203ENST00000470278 GNAT3A8MTJ3 354 aa19.77■□□□□ 0.76
CDC42SE1-203ENST00000470278 SIPA1L3O60292 1781 aaPredicted RBP19.76■□□□□ 0.75
CDC42SE1-203ENST00000470278 CEMIPQ8WUJ3 1361 aa19.76■□□□□ 0.75
CDC42SE1-203ENST00000470278 ERVV-2B6SEH9 535 aa19.76■□□□□ 0.75
CDC42SE1-203ENST00000470278 NFE2L2Q16236 605 aa19.76■□□□□ 0.75
CDC42SE1-203ENST00000470278 SYT17Q9BSW7 474 aa19.76■□□□□ 0.75
CDC42SE1-203ENST00000470278 HTATSF1O43719 755 aaKnown RBP19.75■□□□□ 0.75
CDC42SE1-203ENST00000470278 MIER1Q8N108 512 aa19.75■□□□□ 0.75
CDC42SE1-203ENST00000470278 C5P01031 1676 aa19.75■□□□□ 0.75
CDC42SE1-203ENST00000470278 PRIM1P49642 420 aaKnown RBP19.74■□□□□ 0.75
CDC42SE1-203ENST00000470278 KCNQ4P56696 695 aa19.74■□□□□ 0.75
CDC42SE1-203ENST00000470278 MPRIPQ6WCQ1 1025 aa19.74■□□□□ 0.75
CDC42SE1-203ENST00000470278 CCDC146Q8IYE0 955 aa19.73■□□□□ 0.75
CDC42SE1-203ENST00000470278 PNPLA7Q6ZV29 1317 aa19.73■□□□□ 0.75
CDC42SE1-203ENST00000470278 RNMTO43148 476 aaKnown RBP19.72■□□□□ 0.75
CDC42SE1-203ENST00000470278 SYTL4Q96C24 671 aaPredicted RBP19.71■□□□□ 0.75
CDC42SE1-203ENST00000470278 TMOD3Q9NYL9 352 aa19.71■□□□□ 0.75
CDC42SE1-203ENST00000470278 TMPOP42166 694 aaKnown RBP19.7■□□□□ 0.74
CDC42SE1-203ENST00000470278 IL17REQ8NFR9 667 aa19.7■□□□□ 0.74
CDC42SE1-203ENST00000470278 RTF1Q92541 710 aaKnown RBP19.7■□□□□ 0.74
CDC42SE1-203ENST00000470278 SLC52A2Q9HAB3 445 aa19.7■□□□□ 0.74
CDC42SE1-203ENST00000470278 LMOD3Q0VAK6 560 aa19.69■□□□□ 0.74
CDC42SE1-203ENST00000470278 PIGBQ92521 554 aa19.69■□□□□ 0.74
CDC42SE1-203ENST00000470278 LGR6Q9HBX8 967 aa19.69■□□□□ 0.74
CDC42SE1-203ENST00000470278 ZNF831Q5JPB2 1677 aa19.68■□□□□ 0.74
CDC42SE1-203ENST00000470278 UBR2Q8IWV8 1755 aa19.68■□□□□ 0.74
CDC42SE1-203ENST00000470278 CABP4P57796 275 aa19.68■□□□□ 0.74
CDC42SE1-203ENST00000470278 FAM9BQ8IZU0 186 aa19.68■□□□□ 0.74
CDC42SE1-203ENST00000470278 ARXQ96QS3 562 aa19.68■□□□□ 0.74
CDC42SE1-203ENST00000470278 CICQ96RK0 1608 aaPredicted RBP19.67■□□□□ 0.74
CDC42SE1-203ENST00000470278 RIPK4P57078 832 aa19.67■□□□□ 0.74
CDC42SE1-203ENST00000470278 NCBP3Q53F19 620 aaKnown RBP19.67■□□□□ 0.74
CDC42SE1-203ENST00000470278 SLC27A3Q5K4L6 730 aa19.67■□□□□ 0.74
CDC42SE1-203ENST00000470278 UBR3Q6ZT12 1888 aa19.67■□□□□ 0.74
CDC42SE1-203ENST00000470278 APAF1O14727 1248 aa19.66■□□□□ 0.74
CDC42SE1-203ENST00000470278 ZNF784Q8NCA9 323 aaPredicted RBP19.66■□□□□ 0.74
CDC42SE1-203ENST00000470278 TEFQ10587 303 aa19.65■□□□□ 0.74
CDC42SE1-203ENST00000470278 MCM10Q7L590 875 aa19.65■□□□□ 0.74
CDC42SE1-203ENST00000470278 NFATC2IPQ8NCF5 419 aa19.65■□□□□ 0.74
CDC42SE1-203ENST00000470278 SMARCC1Q92922 1105 aaPredicted RBP19.65■□□□□ 0.74
CDC42SE1-203ENST00000470278 PALLDQ8WX93 1383 aa19.65■□□□□ 0.74
CDC42SE1-203ENST00000470278 RRP7AQ9Y3A4 280 aaKnown RBP19.64■□□□□ 0.73
CDC42SE1-203ENST00000470278 KDM3BQ7LBC6 1761 aa19.64■□□□□ 0.73
CDC42SE1-203ENST00000470278 TRIM35Q9UPQ4 493 aa19.63■□□□□ 0.73
CDC42SE1-203ENST00000470278 C4BP0C0L5 1744 aa19.62■□□□□ 0.73
CDC42SE1-203ENST00000470278 KCPQ6ZWJ8 1503 aa19.62■□□□□ 0.73
CDC42SE1-203ENST00000470278 DCTN1Q14203 1278 aa19.62■□□□□ 0.73
CDC42SE1-203ENST00000470278 CCDC27Q2M243 656 aa19.62■□□□□ 0.73
CDC42SE1-203ENST00000470278 ATG3Q9NT62 314 aa19.62■□□□□ 0.73
CDC42SE1-203ENST00000470278 NGEFQ8N5V2 710 aa19.61■□□□□ 0.73
CDC42SE1-203ENST00000470278 NLGN2Q8NFZ4 835 aa19.61■□□□□ 0.73
CDC42SE1-203ENST00000470278 SLC16A10Q8TF71 515 aa19.61■□□□□ 0.73
CDC42SE1-203ENST00000470278 ASAP1Q9ULH1 1129 aa19.61■□□□□ 0.73
CDC42SE1-203ENST00000470278 NEUROD2Q15784 382 aa19.6■□□□□ 0.73
CDC42SE1-203ENST00000470278 DCAF8L1A6NGE4 600 aa19.59■□□□□ 0.73
CDC42SE1-203ENST00000470278 AMIGO3Q86WK7 504 aa19.59■□□□□ 0.73
CDC42SE1-203ENST00000470278 COL5A3P25940 1745 aaPredicted RBP19.59■□□□□ 0.73
CDC42SE1-203ENST00000470278 COL23A1Q86Y22 540 aaPredicted RBP19.58■□□□□ 0.72
CDC42SE1-203ENST00000470278 THUMPD2Q9BTF0 503 aaKnown RBP19.58■□□□□ 0.72
CDC42SE1-203ENST00000470278 CCNL1Q9UK58 526 aaPredicted RBP19.58■□□□□ 0.72
CDC42SE1-203ENST00000470278 TJP1Q07157 1748 aa19.58■□□□□ 0.72
CDC42SE1-203ENST00000470278 TAF7Q15545 349 aaPredicted RBP19.57■□□□□ 0.72
CDC42SE1-203ENST00000470278 ZNF790Q6PG37 636 aa19.57■□□□□ 0.72
CDC42SE1-203ENST00000470278 BABAM1Q9NWV8 329 aa19.57■□□□□ 0.72
CDC42SE1-203ENST00000470278 TFCP2L1Q9NZI6 479 aa19.57■□□□□ 0.72
CDC42SE1-203ENST00000470278 CEP350Q5VT06 3117 aa19.56■□□□□ 0.72
CDC42SE1-203ENST00000470278 LOC102724428A0A0B4J2F2 783 aa19.56■□□□□ 0.72
CDC42SE1-203ENST00000470278 BTBD11A6QL63 1104 aa19.56■□□□□ 0.72
CDC42SE1-203ENST00000470278 HMGB2P26583 209 aaKnown RBP19.56■□□□□ 0.72
CDC42SE1-203ENST00000470278 SIK1P57059 783 aa19.56■□□□□ 0.72
CDC42SE1-203ENST00000470278 CALD1Q05682 793 aaKnown RBP19.56■□□□□ 0.72
CDC42SE1-203ENST00000470278 TTC5Q8N0Z6 440 aa19.55■□□□□ 0.72
CDC42SE1-203ENST00000470278 KIAA1551Q9HCM1 1747 aa19.54■□□□□ 0.72
CDC42SE1-203ENST00000470278 SLC39A6Q13433 755 aa19.54■□□□□ 0.72
CDC42SE1-203ENST00000470278 WWC1Q8IX03 1113 aa19.54■□□□□ 0.72
CDC42SE1-203ENST00000470278 YBX3P16989 372 aaKnown RBP eCLIP19.53■□□□□ 0.72
CDC42SE1-203ENST00000470278 VSIG10Q8N0Z9 540 aa19.53■□□□□ 0.72
CDC42SE1-203ENST00000470278 LAMB4A4D0S4 1761 aa19.52■□□□□ 0.72
CDC42SE1-203ENST00000470278 SLC4A9Q96Q91 983 aa19.52■□□□□ 0.72
CDC42SE1-203ENST00000470278 HEG1Q9ULI3 1381 aa19.52■□□□□ 0.72
CDC42SE1-203ENST00000470278 IL16Q14005 1332 aa19.51■□□□□ 0.71
CDC42SE1-203ENST00000470278 ZNF521Q96K83 1311 aa19.51■□□□□ 0.71
CDC42SE1-203ENST00000470278 PTCD1O75127 700 aaKnown RBP19.51■□□□□ 0.71
CDC42SE1-203ENST00000470278 MSL1Q68DK7 614 aa19.51■□□□□ 0.71
CDC42SE1-203ENST00000470278 CFAP44Q96MT7 982 aa19.51■□□□□ 0.71
CDC42SE1-203ENST00000470278 IFT57Q9NWB7 429 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 132.1 ms