RNA–Protein interactions for RNA: ENST00000470171.5

FDPS-208, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 746 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-208ENST00000470171 DCAF8L1A6NGE4 600 aa20.59■□□□□ 0.89
FDPS-208ENST00000470171 SSFA2P28290 1259 aa20.59■□□□□ 0.89
FDPS-208ENST00000470171 DDX10Q13206 875 aaKnown RBP20.59■□□□□ 0.89
FDPS-208ENST00000470171 RSPH6AQ9H0K4 717 aa20.59■□□□□ 0.89
FDPS-208ENST00000470171 LY75O60449 1722 aa20.58■□□□□ 0.89
FDPS-208ENST00000470171 HTATSF1O43719 755 aaKnown RBP20.58■□□□□ 0.89
FDPS-208ENST00000470171 PTGER2P43116 358 aa20.58■□□□□ 0.89
FDPS-208ENST00000470171 KCNQ4P56696 695 aa20.58■□□□□ 0.89
FDPS-208ENST00000470171 ADRA2BP18089 450 aa20.57■□□□□ 0.88
FDPS-208ENST00000470171 PRKAR2BP31323 418 aa20.57■□□□□ 0.88
FDPS-208ENST00000470171 SGIP1Q9BQI5 828 aa20.56■□□□□ 0.88
FDPS-208ENST00000470171 PDGFDQ9GZP0 370 aaPredicted RBP20.56■□□□□ 0.88
FDPS-208ENST00000470171 ATF5Q9Y2D1 282 aaPredicted RBP20.56■□□□□ 0.88
FDPS-208ENST00000470171 MAP3K5Q99683 1374 aa20.56■□□□□ 0.88
FDPS-208ENST00000470171 VSIG10Q8N0Z9 540 aa20.55■□□□□ 0.88
FDPS-208ENST00000470171 ARXQ96QS3 562 aa20.55■□□□□ 0.88
FDPS-208ENST00000470171 RBM42Q9BTD8 480 aaKnown RBP20.55■□□□□ 0.88
FDPS-208ENST00000470171 CNTNAP4Q9C0A0 1308 aa20.54■□□□□ 0.88
FDPS-208ENST00000470171 CASZ1Q86V15 1759 aa20.54■□□□□ 0.88
FDPS-208ENST00000470171 TEFQ10587 303 aa20.54■□□□□ 0.88
FDPS-208ENST00000470171 COL23A1Q86Y22 540 aaPredicted RBP20.54■□□□□ 0.88
FDPS-208ENST00000470171 RTF1Q92541 710 aaKnown RBP20.54■□□□□ 0.88
FDPS-208ENST00000470171 LGR6Q9HBX8 967 aa20.54■□□□□ 0.88
FDPS-208ENST00000470171 KAT6BQ8WYB5 2073 aa20.54■□□□□ 0.88
FDPS-208ENST00000470171 MYBBP1AQ9BQG0 1328 aaKnown RBP20.53■□□□□ 0.88
FDPS-208ENST00000470171 TOGARAM1Q9Y4F4 1720 aa20.53■□□□□ 0.88
FDPS-208ENST00000470171 MSH5O43196 834 aa20.53■□□□□ 0.88
FDPS-208ENST00000470171 LINC00116Q8NCU8 138 aa20.53■□□□□ 0.88
FDPS-208ENST00000470171 RTCBQ9Y3I0 505 aaKnown RBP20.53■□□□□ 0.88
FDPS-208ENST00000470171 ITPK1Q13572 414 aa20.52■□□□□ 0.88
FDPS-208ENST00000470171 TEX13AQ9BXU3 409 aaPredicted RBP20.52■□□□□ 0.88
FDPS-208ENST00000470171 MRC1P22897 1456 aa20.51■□□□□ 0.87
FDPS-208ENST00000470171 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.51■□□□□ 0.87
FDPS-208ENST00000470171 TRAPPC3LQ5T215 181 aa20.51■□□□□ 0.87
FDPS-208ENST00000470171 TTC5Q8N0Z6 440 aa20.51■□□□□ 0.87
FDPS-208ENST00000470171 GNPATO15228 680 aa20.5■□□□□ 0.87
FDPS-208ENST00000470171 PHACTR3Q96KR7 559 aa20.5■□□□□ 0.87
FDPS-208ENST00000470171 QSER1Q2KHR3 1735 aa20.5■□□□□ 0.87
FDPS-208ENST00000470171 CEMIPQ8WUJ3 1361 aa20.49■□□□□ 0.87
FDPS-208ENST00000470171 ZNF831Q5JPB2 1677 aa20.49■□□□□ 0.87
FDPS-208ENST00000470171 PTCD1O75127 700 aaKnown RBP20.49■□□□□ 0.87
FDPS-208ENST00000470171 RPS6KA4O75676 772 aa20.49■□□□□ 0.87
FDPS-208ENST00000470171 IL17REQ8NFR9 667 aa20.48■□□□□ 0.87
FDPS-208ENST00000470171 SLC4A9Q96Q91 983 aa20.48■□□□□ 0.87
FDPS-208ENST00000470171 ITGB4P16144 1822 aa20.48■□□□□ 0.87
FDPS-208ENST00000470171 NLGN1Q8N2Q7 840 aa20.47■□□□□ 0.87
FDPS-208ENST00000470171 ZNF790Q6PG37 636 aa20.46■□□□□ 0.87
FDPS-208ENST00000470171 SYT17Q9BSW7 474 aa20.46■□□□□ 0.87
FDPS-208ENST00000470171 MAPK8IP3Q9UPT6 1336 aa20.46■□□□□ 0.87
FDPS-208ENST00000470171 C4BP0C0L5 1744 aa20.45■□□□□ 0.86
FDPS-208ENST00000470171 STARD3NLO95772 234 aa20.45■□□□□ 0.86
FDPS-208ENST00000470171 PNISRQ8TF01 805 aaKnown RBP20.45■□□□□ 0.86
FDPS-208ENST00000470171 FHDC1Q9C0D6 1143 aaPredicted RBP20.45■□□□□ 0.86
FDPS-208ENST00000470171 C5P01031 1676 aa20.45■□□□□ 0.86
FDPS-208ENST00000470171 RFC4P35249 363 aa20.44■□□□□ 0.86
FDPS-208ENST00000470171 PRKRIP1Q9H875 184 aaPredicted RBP20.44■□□□□ 0.86
FDPS-208ENST00000470171 ADAMTS7Q9UKP4 1686 aa20.43■□□□□ 0.86
FDPS-208ENST00000470171 ZNF316A6NFI3 1004 aaPredicted RBP20.43■□□□□ 0.86
FDPS-208ENST00000470171 BTBD11A6QL63 1104 aa20.43■□□□□ 0.86
FDPS-208ENST00000470171 PHF14O94880 888 aa20.43■□□□□ 0.86
FDPS-208ENST00000470171 CRKLP46109 303 aaKnown RBP20.43■□□□□ 0.86
FDPS-208ENST00000470171 FMNL2Q96PY5 1086 aa20.43■□□□□ 0.86
FDPS-208ENST00000470171 PLEKHF1Q96S99 279 aa20.43■□□□□ 0.86
FDPS-208ENST00000470171 CD2APQ9Y5K6 639 aa20.43■□□□□ 0.86
FDPS-208ENST00000470171 LMOD3Q0VAK6 560 aa20.42■□□□□ 0.86
FDPS-208ENST00000470171 NFE2L2Q16236 605 aa20.42■□□□□ 0.86
FDPS-208ENST00000470171 CCDC87Q9NVE4 849 aa20.42■□□□□ 0.86
FDPS-208ENST00000470171 SLC39A6Q13433 755 aa20.41■□□□□ 0.86
FDPS-208ENST00000470171 CYP19A1P11511 503 aaPredicted RBP20.4■□□□□ 0.86
FDPS-208ENST00000470171 WDR43Q15061 677 aaKnown RBP eCLIP20.4■□□□□ 0.863e-7■■■■□ 25.4
FDPS-208ENST00000470171 TAF7Q15545 349 aaPredicted RBP20.4■□□□□ 0.86
FDPS-208ENST00000470171 ARHGEF1Q92888 912 aaKnown RBP20.4■□□□□ 0.86
FDPS-208ENST00000470171 SCN11AQ9UI33 1791 aa20.39■□□□□ 0.86
FDPS-208ENST00000470171 A0A087WZG4 1122 aa20.39■□□□□ 0.85
FDPS-208ENST00000470171 DNAJC10Q8IXB1 793 aa20.39■□□□□ 0.85
FDPS-208ENST00000470171 HEG1Q9ULI3 1381 aa20.38■□□□□ 0.85
FDPS-208ENST00000470171 INTS5Q6P9B9 1019 aaKnown RBP20.38■□□□□ 0.85
FDPS-208ENST00000470171 BABAM1Q9NWV8 329 aa20.38■□□□□ 0.85
FDPS-208ENST00000470171 CICQ96RK0 1608 aaPredicted RBP20.38■□□□□ 0.85
FDPS-208ENST00000470171 NPM2Q86SE8 214 aaKnown RBP20.37■□□□□ 0.85
FDPS-208ENST00000470171 AMIGO3Q86WK7 504 aa20.37■□□□□ 0.85
FDPS-208ENST00000470171 ZNF496Q96IT1 587 aaPredicted RBP20.37■□□□□ 0.85
FDPS-208ENST00000470171 ZPR1O75312 459 aa20.36■□□□□ 0.85
FDPS-208ENST00000470171 MCM10Q7L590 875 aa20.36■□□□□ 0.85
FDPS-208ENST00000470171 TAF1LQ8IZX4 1826 aa20.36■□□□□ 0.85
FDPS-208ENST00000470171 SNRPA1P09661 255 aaKnown RBP20.35■□□□□ 0.85
FDPS-208ENST00000470171 MSL1Q68DK7 614 aa20.35■□□□□ 0.85
FDPS-208ENST00000470171 SOS1Q07889 1333 aaPredicted RBP20.34■□□□□ 0.85
FDPS-208ENST00000470171 KCPQ6ZWJ8 1503 aa20.34■□□□□ 0.85
FDPS-208ENST00000470171 COL24A1Q17RW2 1714 aa20.34■□□□□ 0.85
FDPS-208ENST00000470171 GYS1P13807 737 aa20.34■□□□□ 0.85
FDPS-208ENST00000470171 RUNDC1Q96C34 613 aa20.34■□□□□ 0.85
FDPS-208ENST00000470171 USP42Q9H9J4 1324 aaKnown RBP20.33■□□□□ 0.85
FDPS-208ENST00000470171 IL6STP40189 918 aaPredicted RBP20.33■□□□□ 0.85
FDPS-208ENST00000470171 NARFQ9UHQ1 456 aa20.33■□□□□ 0.85
FDPS-208ENST00000470171 MMP10P09238 476 aa20.32■□□□□ 0.84
FDPS-208ENST00000470171 PARP3Q9Y6F1 533 aa20.32■□□□□ 0.84
FDPS-208ENST00000470171 RGL2O15211 777 aa20.31■□□□□ 0.84
FDPS-208ENST00000470171 GRIN3BO60391 1043 aa20.31■□□□□ 0.84
FDPS-208ENST00000470171 EIF5P55010 431 aaKnown RBP20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms