RNA–Protein interactions for RNA: ENST00000469602.1

SRRT-208, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 376 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-208ENST00000469602 MAP3K5Q99683 1374 aa12.98□□□□□ -0.33
SRRT-208ENST00000469602 LOC102724428A0A0B4J2F2 783 aa12.98□□□□□ -0.33
SRRT-208ENST00000469602 HMGB2P26583 209 aaKnown RBP12.98□□□□□ -0.33
SRRT-208ENST00000469602 SIK1P57059 783 aa12.98□□□□□ -0.33
SRRT-208ENST00000469602 NFATC2IPQ8NCF5 419 aa12.98□□□□□ -0.33
SRRT-208ENST00000469602 PDGFDQ9GZP0 370 aaPredicted RBP12.98□□□□□ -0.33
SRRT-208ENST00000469602 PRKRIP1Q9H875 184 aaPredicted RBP12.98□□□□□ -0.33
SRRT-208ENST00000469602 LGR6Q9HBX8 967 aa12.98□□□□□ -0.33
SRRT-208ENST00000469602 C4BP0C0L5 1744 aa12.98□□□□□ -0.33
SRRT-208ENST00000469602 RNMTO43148 476 aaKnown RBP12.97□□□□□ -0.33
SRRT-208ENST00000469602 SLC52A2Q9HAB3 445 aa12.97□□□□□ -0.33
SRRT-208ENST00000469602 SIPA1L3O60292 1781 aaPredicted RBP12.97□□□□□ -0.33
SRRT-208ENST00000469602 GNAT3A8MTJ3 354 aa12.96□□□□□ -0.33
SRRT-208ENST00000469602 TFCP2L1Q9NZI6 479 aa12.96□□□□□ -0.33
SRRT-208ENST00000469602 COL5A3P25940 1745 aaPredicted RBP12.96□□□□□ -0.34
SRRT-208ENST00000469602 DLG5Q8TDM6 1919 aa12.96□□□□□ -0.34
SRRT-208ENST00000469602 UBR3Q6ZT12 1888 aa12.95□□□□□ -0.34
SRRT-208ENST00000469602 ATP6V1AP38606 617 aa12.95□□□□□ -0.34
SRRT-208ENST00000469602 SPON1Q9HCB6 807 aa12.95□□□□□ -0.34
SRRT-208ENST00000469602 PNPLA7Q6ZV29 1317 aa12.94□□□□□ -0.34
SRRT-208ENST00000469602 ZBTB7AO95365 584 aa12.94□□□□□ -0.34
SRRT-208ENST00000469602 ITPK1Q13572 414 aa12.94□□□□□ -0.34
SRRT-208ENST00000469602 IL17REQ8NFR9 667 aa12.94□□□□□ -0.34
SRRT-208ENST00000469602 RBM42Q9BTD8 480 aaKnown RBP12.94□□□□□ -0.34
SRRT-208ENST00000469602 CICQ96RK0 1608 aaPredicted RBP12.94□□□□□ -0.34
SRRT-208ENST00000469602 UBR2Q8IWV8 1755 aa12.94□□□□□ -0.34
SRRT-208ENST00000469602 NEFMP07197 916 aa12.93□□□□□ -0.34
SRRT-208ENST00000469602 LINC00116Q8NCU8 138 aa12.93□□□□□ -0.34
SRRT-208ENST00000469602 AK7Q96M32 723 aa12.93□□□□□ -0.34
SRRT-208ENST00000469602 SLC4A9Q96Q91 983 aa12.93□□□□□ -0.34
SRRT-208ENST00000469602 PLEKHF1Q96S99 279 aa12.93□□□□□ -0.34
SRRT-208ENST00000469602 MTFR1LQ9H019 292 aa12.93□□□□□ -0.34
SRRT-208ENST00000469602 PNNQ9H307 717 aaKnown RBP12.93□□□□□ -0.34
SRRT-208ENST00000469602 TJP1Q07157 1748 aa12.93□□□□□ -0.34
SRRT-208ENST00000469602 COL24A1Q17RW2 1714 aa12.93□□□□□ -0.34
SRRT-208ENST00000469602 CEMIPQ8WUJ3 1361 aa12.93□□□□□ -0.34
SRRT-208ENST00000469602 PTCD1O75127 700 aaKnown RBP12.92□□□□□ -0.34
SRRT-208ENST00000469602 TEFQ10587 303 aa12.92□□□□□ -0.34
SRRT-208ENST00000469602 MYH14Q7Z406 1995 aaKnown RBP12.91□□□□□ -0.34
SRRT-208ENST00000469602 SLC16A10Q8TF71 515 aa12.91□□□□□ -0.34
SRRT-208ENST00000469602 RTF1Q92541 710 aaKnown RBP12.91□□□□□ -0.34
SRRT-208ENST00000469602 ATF5Q9Y2D1 282 aaPredicted RBP12.91□□□□□ -0.34
SRRT-208ENST00000469602 KCPQ6ZWJ8 1503 aa12.91□□□□□ -0.34
SRRT-208ENST00000469602 MAPK8IP3Q9UPT6 1336 aa12.9□□□□□ -0.34
SRRT-208ENST00000469602 HTATSF1O43719 755 aaKnown RBP12.9□□□□□ -0.34
SRRT-208ENST00000469602 PTGER2P43116 358 aa12.9□□□□□ -0.34
SRRT-208ENST00000469602 SLC39A6Q13433 755 aa12.9□□□□□ -0.34
SRRT-208ENST00000469602 COL23A1Q86Y22 540 aaPredicted RBP12.9□□□□□ -0.34
SRRT-208ENST00000469602 FLAD1Q8NFF5 587 aa12.9□□□□□ -0.34
SRRT-208ENST00000469602 GNPATO15228 680 aa12.89□□□□□ -0.35
SRRT-208ENST00000469602 MSH5O43196 834 aa12.89□□□□□ -0.35
SRRT-208ENST00000469602 WDR43Q15061 677 aaKnown RBP eCLIP12.89□□□□□ -0.35
SRRT-208ENST00000469602 MCM10Q7L590 875 aa12.89□□□□□ -0.35
SRRT-208ENST00000469602 PPP1R1BQ9UD71 204 aaPredicted RBP12.89□□□□□ -0.35
SRRT-208ENST00000469602 CNTNAP4Q9C0A0 1308 aa12.88□□□□□ -0.35
SRRT-208ENST00000469602 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.88□□□□□ -0.35
SRRT-208ENST00000469602 SSFA2P28290 1259 aa12.88□□□□□ -0.35
SRRT-208ENST00000469602 NFE2L2Q16236 605 aa12.88□□□□□ -0.35
SRRT-208ENST00000469602 RC3H1Q5TC82 1133 aaKnown RBP12.88□□□□□ -0.35
SRRT-208ENST00000469602 AMIGO3Q86WK7 504 aa12.88□□□□□ -0.35
SRRT-208ENST00000469602 TTC5Q8N0Z6 440 aa12.88□□□□□ -0.35
SRRT-208ENST00000469602 SGIP1Q9BQI5 828 aa12.88□□□□□ -0.35
SRRT-208ENST00000469602 PHF14O94880 888 aa12.87□□□□□ -0.35
SRRT-208ENST00000469602 DCTN1Q14203 1278 aa12.87□□□□□ -0.35
SRRT-208ENST00000469602 ZNF790Q6PG37 636 aa12.87□□□□□ -0.35
SRRT-208ENST00000469602 VSIG10Q8N0Z9 540 aa12.87□□□□□ -0.35
SRRT-208ENST00000469602 C4AP0C0L4 1744 aa12.86□□□□□ -0.35
SRRT-208ENST00000469602 BTBD11A6QL63 1104 aa12.86□□□□□ -0.35
SRRT-208ENST00000469602 ANP32CO43423 234 aa12.86□□□□□ -0.35
SRRT-208ENST00000469602 SMIM5Q71RC9 77 aa12.86□□□□□ -0.35
SRRT-208ENST00000469602 DNAJC10Q8IXB1 793 aa12.86□□□□□ -0.35
SRRT-208ENST00000469602 ADAMTS8Q9UP79 889 aa12.86□□□□□ -0.35
SRRT-208ENST00000469602 CRKLP46109 303 aaKnown RBP12.85□□□□□ -0.35
SRRT-208ENST00000469602 CCDC146Q8IYE0 955 aa12.85□□□□□ -0.35
SRRT-208ENST00000469602 ZNF496Q96IT1 587 aaPredicted RBP12.85□□□□□ -0.35
SRRT-208ENST00000469602 RTCBQ9Y3I0 505 aaKnown RBP12.85□□□□□ -0.35
SRRT-208ENST00000469602 KDM3BQ7LBC6 1761 aa12.84□□□□□ -0.35
SRRT-208ENST00000469602 RPS6KA4O75676 772 aa12.84□□□□□ -0.35
SRRT-208ENST00000469602 CYP19A1P11511 503 aaPredicted RBP12.84□□□□□ -0.35
SRRT-208ENST00000469602 ADRA2BP18089 450 aa12.84□□□□□ -0.35
SRRT-208ENST00000469602 POLD1P28340 1107 aa12.84□□□□□ -0.35
SRRT-208ENST00000469602 TMPOP42166 694 aaKnown RBP12.84□□□□□ -0.35
SRRT-208ENST00000469602 TAF7Q15545 349 aaPredicted RBP12.84□□□□□ -0.35
SRRT-208ENST00000469602 TRAPPC3LQ5T215 181 aa12.84□□□□□ -0.35
SRRT-208ENST00000469602 INTS5Q6P9B9 1019 aaKnown RBP12.84□□□□□ -0.35
SRRT-208ENST00000469602 RUNDC1Q96C34 613 aa12.84□□□□□ -0.35
SRRT-208ENST00000469602 FMNL2Q96PY5 1086 aa12.84□□□□□ -0.35
SRRT-208ENST00000469602 ARXQ96QS3 562 aa12.84□□□□□ -0.35
SRRT-208ENST00000469602 HEG1Q9ULI3 1381 aa12.83□□□□□ -0.36
SRRT-208ENST00000469602 RIPK4P57078 832 aa12.83□□□□□ -0.36
SRRT-208ENST00000469602 MSL1Q68DK7 614 aa12.83□□□□□ -0.36
SRRT-208ENST00000469602 CCDC87Q9NVE4 849 aa12.83□□□□□ -0.36
SRRT-208ENST00000469602 GOLGB1Q14789 3259 aaKnown RBP12.82□□□□□ -0.36
SRRT-208ENST00000469602 KCNQ3O43525 872 aa12.82□□□□□ -0.36
SRRT-208ENST00000469602 STARD3NLO95772 234 aa12.82□□□□□ -0.36
SRRT-208ENST00000469602 LMOD3Q0VAK6 560 aa12.82□□□□□ -0.36
SRRT-208ENST00000469602 CCDC184Q52MB2 194 aa12.82□□□□□ -0.36
SRRT-208ENST00000469602 ARHGEF1Q92888 912 aaKnown RBP12.82□□□□□ -0.36
SRRT-208ENST00000469602 THUMPD2Q9BTF0 503 aaKnown RBP12.82□□□□□ -0.36
SRRT-208ENST00000469602 TEX13AQ9BXU3 409 aaPredicted RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms