RNA–Protein interactions for RNA: ENST00000469123.5

SSBP1-208, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-208ENST00000469123 PAPPAQ13219 1627 aa11.29□□□□□ -0.6
SSBP1-208ENST00000469123 MRS2Q9HD23 443 aa11.29□□□□□ -0.6
SSBP1-208ENST00000469123 STK32BQ9NY57 414 aa11.29□□□□□ -0.6
SSBP1-208ENST00000469123 CCNL1Q9UK58 526 aaPredicted RBP11.29□□□□□ -0.6
SSBP1-208ENST00000469123 LOC102724428A0A0B4J2F2 783 aa11.28□□□□□ -0.6
SSBP1-208ENST00000469123 SIK1P57059 783 aa11.28□□□□□ -0.6
SSBP1-208ENST00000469123 PROM2Q8N271 834 aa11.28□□□□□ -0.6
SSBP1-208ENST00000469123 NFATC2IPQ8NCF5 419 aa11.28□□□□□ -0.6
SSBP1-208ENST00000469123 ADAMTS8Q9UP79 889 aa11.28□□□□□ -0.6
SSBP1-208ENST00000469123 QSER1Q2KHR3 1735 aa11.28□□□□□ -0.6
SSBP1-208ENST00000469123 SIPA1L3O60292 1781 aaPredicted RBP11.28□□□□□ -0.6
SSBP1-208ENST00000469123 TAF1LQ8IZX4 1826 aa11.28□□□□□ -0.6
SSBP1-208ENST00000469123 CICQ96RK0 1608 aaPredicted RBP11.27□□□□□ -0.6
SSBP1-208ENST00000469123 C5P01031 1676 aa11.27□□□□□ -0.6
SSBP1-208ENST00000469123 TTC5Q8N0Z6 440 aa11.27□□□□□ -0.61
SSBP1-208ENST00000469123 PNISRQ8TF01 805 aaKnown RBP11.27□□□□□ -0.61
SSBP1-208ENST00000469123 LGR6Q9HBX8 967 aa11.27□□□□□ -0.61
SSBP1-208ENST00000469123 ATG3Q9NT62 314 aa11.27□□□□□ -0.61
SSBP1-208ENST00000469123 ASAP1Q9ULH1 1129 aa11.27□□□□□ -0.61
SSBP1-208ENST00000469123 TMPOP42166 694 aaKnown RBP11.26□□□□□ -0.61
SSBP1-208ENST00000469123 NCBP3Q53F19 620 aaKnown RBP11.26□□□□□ -0.61
SSBP1-208ENST00000469123 VSIG10Q8N0Z9 540 aa11.26□□□□□ -0.61
SSBP1-208ENST00000469123 IL17REQ8NFR9 667 aa11.26□□□□□ -0.61
SSBP1-208ENST00000469123 BABAM1Q9NWV8 329 aa11.26□□□□□ -0.61
SSBP1-208ENST00000469123 UBR2Q8IWV8 1755 aa11.26□□□□□ -0.61
SSBP1-208ENST00000469123 CCER2I3L3R5 266 aa11.25□□□□□ -0.61
SSBP1-208ENST00000469123 RIPK4P57078 832 aa11.25□□□□□ -0.61
SSBP1-208ENST00000469123 SLC15A2Q16348 729 aa11.25□□□□□ -0.61
SSBP1-208ENST00000469123 NGEFQ8N5V2 710 aa11.25□□□□□ -0.61
SSBP1-208ENST00000469123 FLAD1Q8NFF5 587 aa11.25□□□□□ -0.61
SSBP1-208ENST00000469123 LRRC4BQ9NT99 713 aa11.25□□□□□ -0.61
SSBP1-208ENST00000469123 ATP6V1AP38606 617 aa11.24□□□□□ -0.61
SSBP1-208ENST00000469123 CALD1Q05682 793 aaKnown RBP11.24□□□□□ -0.61
SSBP1-208ENST00000469123 DIEXFQ68CQ4 756 aaKnown RBP11.24□□□□□ -0.61
SSBP1-208ENST00000469123 ZNF790Q6PG37 636 aa11.24□□□□□ -0.61
SSBP1-208ENST00000469123 AKT1S1Q96B36 256 aa11.24□□□□□ -0.61
SSBP1-208ENST00000469123 TEX13AQ9BXU3 409 aaPredicted RBP11.24□□□□□ -0.61
SSBP1-208ENST00000469123 C4BP0C0L5 1744 aa11.23□□□□□ -0.61
SSBP1-208ENST00000469123 BTBD11A6QL63 1104 aa11.23□□□□□ -0.61
SSBP1-208ENST00000469123 TAF7Q15545 349 aaPredicted RBP11.23□□□□□ -0.61
SSBP1-208ENST00000469123 RC3H1Q5TC82 1133 aaKnown RBP11.23□□□□□ -0.61
SSBP1-208ENST00000469123 MCM10Q7L590 875 aa11.23□□□□□ -0.61
SSBP1-208ENST00000469123 RBM42Q9BTD8 480 aaKnown RBP11.23□□□□□ -0.61
SSBP1-208ENST00000469123 ANO8Q9HCE9 1232 aaPredicted RBP11.23□□□□□ -0.61
SSBP1-208ENST00000469123 CNTNAP4Q9C0A0 1308 aa11.23□□□□□ -0.61
SSBP1-208ENST00000469123 ADRA2BP18089 450 aa11.22□□□□□ -0.61
SSBP1-208ENST00000469123 COL5A3P25940 1745 aaPredicted RBP11.22□□□□□ -0.61
SSBP1-208ENST00000469123 R3HDM1Q15032 1099 aaKnown RBP11.22□□□□□ -0.61
SSBP1-208ENST00000469123 KCPQ6ZWJ8 1503 aa11.22□□□□□ -0.61
SSBP1-208ENST00000469123 CCDC146Q8IYE0 955 aa11.22□□□□□ -0.61
SSBP1-208ENST00000469123 SLC16A10Q8TF71 515 aa11.22□□□□□ -0.61
SSBP1-208ENST00000469123 AK7Q96M32 723 aa11.22□□□□□ -0.61
SSBP1-208ENST00000469123 FMNL2Q96PY5 1086 aa11.22□□□□□ -0.61
SSBP1-208ENST00000469123 TFCP2L1Q9NZI6 479 aa11.22□□□□□ -0.61
SSBP1-208ENST00000469123 PTCD1O75127 700 aaKnown RBP11.21□□□□□ -0.61
SSBP1-208ENST00000469123 SSFA2P28290 1259 aa11.21□□□□□ -0.61
SSBP1-208ENST00000469123 CCDC27Q2M243 656 aa11.21□□□□□ -0.61
SSBP1-208ENST00000469123 UBR3Q6ZT12 1888 aa11.21□□□□□ -0.62
SSBP1-208ENST00000469123 CASZ1Q86V15 1759 aa11.21□□□□□ -0.62
SSBP1-208ENST00000469123 LRP5O75197 1615 aa11.2□□□□□ -0.62
SSBP1-208ENST00000469123 HEG1Q9ULI3 1381 aa11.2□□□□□ -0.62
SSBP1-208ENST00000469123 STARD3NLO95772 234 aa11.2□□□□□ -0.62
SSBP1-208ENST00000469123 SLC39A6Q13433 755 aa11.2□□□□□ -0.62
SSBP1-208ENST00000469123 ZNF827Q17R98 1081 aa11.2□□□□□ -0.62
SSBP1-208ENST00000469123 CCDC184Q52MB2 194 aa11.2□□□□□ -0.62
SSBP1-208ENST00000469123 TUBGCP6Q96RT7 1819 aa11.2□□□□□ -0.62
SSBP1-208ENST00000469123 KDM3BQ7LBC6 1761 aa11.2□□□□□ -0.62
SSBP1-208ENST00000469123 TJP1Q07157 1748 aa11.2□□□□□ -0.62
SSBP1-208ENST00000469123 PSDA5PKW4 1024 aaPredicted RBP11.19□□□□□ -0.62
SSBP1-208ENST00000469123 APAF1O14727 1248 aa11.19□□□□□ -0.62
SSBP1-208ENST00000469123 ITPK1Q13572 414 aa11.19□□□□□ -0.62
SSBP1-208ENST00000469123 DCTN1Q14203 1278 aa11.19□□□□□ -0.62
SSBP1-208ENST00000469123 LINC00116Q8NCU8 138 aa11.19□□□□□ -0.62
SSBP1-208ENST00000469123 MYH14Q7Z406 1995 aaKnown RBP11.18□□□□□ -0.62
SSBP1-208ENST00000469123 SNRPA1P09661 255 aaKnown RBP11.18□□□□□ -0.62
SSBP1-208ENST00000469123 NEUROD2Q15784 382 aa11.18□□□□□ -0.62
SSBP1-208ENST00000469123 ZNF496Q96IT1 587 aaPredicted RBP11.18□□□□□ -0.62
SSBP1-208ENST00000469123 SLC4A9Q96Q91 983 aa11.18□□□□□ -0.62
SSBP1-208ENST00000469123 MTFR1LQ9H019 292 aa11.18□□□□□ -0.62
SSBP1-208ENST00000469123 SPON1Q9HCB6 807 aa11.18□□□□□ -0.62
SSBP1-208ENST00000469123 TRIM35Q9UPQ4 493 aa11.18□□□□□ -0.62
SSBP1-208ENST00000469123 RTCBQ9Y3I0 505 aaKnown RBP11.18□□□□□ -0.62
SSBP1-208ENST00000469123 PNPLA7Q6ZV29 1317 aa11.17□□□□□ -0.62
SSBP1-208ENST00000469123 GNPATO15228 680 aa11.17□□□□□ -0.62
SSBP1-208ENST00000469123 RPS6KA4O75676 772 aa11.17□□□□□ -0.62
SSBP1-208ENST00000469123 CRKLP46109 303 aaKnown RBP11.17□□□□□ -0.62
SSBP1-208ENST00000469123 KCNQ4P56696 695 aa11.17□□□□□ -0.62
SSBP1-208ENST00000469123 CHMP4AQ9BY43 222 aa11.17□□□□□ -0.62
SSBP1-208ENST00000469123 TSPYL4Q9UJ04 414 aa11.17□□□□□ -0.62
SSBP1-208ENST00000469123 RRP7AQ9Y3A4 280 aaKnown RBP11.17□□□□□ -0.62
SSBP1-208ENST00000469123 LAMB4A4D0S4 1761 aa11.16□□□□□ -0.62
SSBP1-208ENST00000469123 CHL1O00533 1208 aa11.16□□□□□ -0.62
SSBP1-208ENST00000469123 CYP19A1P11511 503 aaPredicted RBP11.16□□□□□ -0.62
SSBP1-208ENST00000469123 GNAI1P63096 354 aa11.16□□□□□ -0.62
SSBP1-208ENST00000469123 NPM2Q86SE8 214 aaKnown RBP11.16□□□□□ -0.62
SSBP1-208ENST00000469123 DNAJC10Q8IXB1 793 aa11.16□□□□□ -0.62
SSBP1-208ENST00000469123 FAM9BQ8IZU0 186 aa11.16□□□□□ -0.62
SSBP1-208ENST00000469123 CFAP44Q96MT7 982 aa11.16□□□□□ -0.62
SSBP1-208ENST00000469123 CCDC87Q9NVE4 849 aa11.16□□□□□ -0.62
SSBP1-208ENST00000469123 IFT57Q9NWB7 429 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms