RNA–Protein interactions for RNA: ENST00000468844.1

RPL39-202, Transcript of ribosomal protein L39, humanhuman

TSL 1 (best)

Gene RPL39, Length 1,915 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-202ENST00000468844 PAPPAQ13219 1627 aa22.73■■□□□ 1.23
RPL39-202ENST00000468844 ONECUT3O60422 494 aaPredicted RBP22.72■■□□□ 1.23
RPL39-202ENST00000468844 SLC52A2Q9HAB3 445 aa22.72■■□□□ 1.23
RPL39-202ENST00000468844 SBF2Q86WG5 1849 aa22.72■■□□□ 1.23
RPL39-202ENST00000468844 TSPYL4Q9UJ04 414 aa22.72■■□□□ 1.23
RPL39-202ENST00000468844 UBR2Q8IWV8 1755 aa22.72■■□□□ 1.23
RPL39-202ENST00000468844 A0A0G2JS52 829 aa22.71■■□□□ 1.23
RPL39-202ENST00000468844 MYT1Q01538 1121 aa22.71■■□□□ 1.23
RPL39-202ENST00000468844 EXOSC9Q06265 439 aaKnown RBP22.71■■□□□ 1.23
RPL39-202ENST00000468844 MARCH10Q8NA82 808 aaPredicted RBP22.71■■□□□ 1.23
RPL39-202ENST00000468844 NFATC2IPQ8NCF5 419 aa22.7■■□□□ 1.23
RPL39-202ENST00000468844 BABAM1Q9NWV8 329 aa22.7■■□□□ 1.22
RPL39-202ENST00000468844 ERVV-2B6SEH9 535 aa22.69■■□□□ 1.22
RPL39-202ENST00000468844 RGS17Q9UGC6 210 aaPredicted RBP22.69■■□□□ 1.22
RPL39-202ENST00000468844 CACNA1FO60840 1977 aa22.68■■□□□ 1.22
RPL39-202ENST00000468844 BTBD11A6QL63 1104 aa22.68■■□□□ 1.22
RPL39-202ENST00000468844 CABP4P57796 275 aa22.67■■□□□ 1.22
RPL39-202ENST00000468844 RBM6P78332 1123 aaKnown RBP22.66■■□□□ 1.22
RPL39-202ENST00000468844 KRT24Q2M2I5 525 aa22.66■■□□□ 1.22
RPL39-202ENST00000468844 ILDR1Q86SU0 546 aaPredicted RBP22.66■■□□□ 1.22
RPL39-202ENST00000468844 SEPT12Q8IYM1 358 aa22.66■■□□□ 1.22
RPL39-202ENST00000468844 RCAN3Q9UKA8 241 aa22.66■■□□□ 1.22
RPL39-202ENST00000468844 C5P01031 1676 aa22.66■■□□□ 1.22
RPL39-202ENST00000468844 TSPYL6Q8N831 410 aa22.65■■□□□ 1.22
RPL39-202ENST00000468844 C8orf58Q8NAV2 365 aa22.65■■□□□ 1.22
RPL39-202ENST00000468844 KCNQ3O43525 872 aa22.64■■□□□ 1.21
RPL39-202ENST00000468844 NHSQ6T4R5 1651 aa22.63■■□□□ 1.21
RPL39-202ENST00000468844 ELL2O00472 640 aaPredicted RBP22.63■■□□□ 1.21
RPL39-202ENST00000468844 CT47B1P0C2W7 299 aaPredicted RBP22.63■■□□□ 1.21
RPL39-202ENST00000468844 SLC39A6Q13433 755 aa22.63■■□□□ 1.21
RPL39-202ENST00000468844 BCL9O00512 1426 aa22.62■■□□□ 1.21
RPL39-202ENST00000468844 TWISTNBQ3B726 338 aaPredicted RBP22.62■■□□□ 1.21
RPL39-202ENST00000468844 ZNF790Q6PG37 636 aa22.62■■□□□ 1.21
RPL39-202ENST00000468844 PELP1Q8IZL8 1130 aaKnown RBP22.62■■□□□ 1.21
RPL39-202ENST00000468844 SUPT16HQ9Y5B9 1047 aaKnown RBP22.62■■□□□ 1.21
RPL39-202ENST00000468844 TMOD3Q9NYL9 352 aa22.61■■□□□ 1.21
RPL39-202ENST00000468844 BTAF1O14981 1849 aa22.61■■□□□ 1.21
RPL39-202ENST00000468844 LAMB4A4D0S4 1761 aa22.61■■□□□ 1.21
RPL39-202ENST00000468844 VAMP4O75379 141 aa22.61■■□□□ 1.21
RPL39-202ENST00000468844 EIF4A1P60842 406 aaKnown RBP22.61■■□□□ 1.21
RPL39-202ENST00000468844 KCPQ6ZWJ8 1503 aa22.59■■□□□ 1.21
RPL39-202ENST00000468844 FAM182BQ5T319 152 aa22.59■■□□□ 1.21
RPL39-202ENST00000468844 POTEAQ6S8J7 498 aa22.59■■□□□ 1.21
RPL39-202ENST00000468844 PIGBQ92521 554 aa22.59■■□□□ 1.21
RPL39-202ENST00000468844 HEG1Q9ULI3 1381 aa22.59■■□□□ 1.21
RPL39-202ENST00000468844 RARSP54136 660 aaKnown RBP22.59■■□□□ 1.21
RPL39-202ENST00000468844 ACSBG1Q96GR2 724 aa22.59■■□□□ 1.21
RPL39-202ENST00000468844 RXRBP28702 533 aa22.58■■□□□ 1.21
RPL39-202ENST00000468844 PRIM1P49642 420 aaKnown RBP22.58■■□□□ 1.21
RPL39-202ENST00000468844 SYTL4Q96C24 671 aaPredicted RBP22.58■■□□□ 1.21
RPL39-202ENST00000468844 RGS12O14924 1447 aa22.57■■□□□ 1.2
RPL39-202ENST00000468844 BCAR3O75815 825 aa22.56■■□□□ 1.2
RPL39-202ENST00000468844 TTC5Q8N0Z6 440 aa22.56■■□□□ 1.2
RPL39-202ENST00000468844 RNF123Q5XPI4 1314 aa22.56■■□□□ 1.2
RPL39-202ENST00000468844 ZNF428Q96B54 188 aa22.55■■□□□ 1.2
RPL39-202ENST00000468844 ZNF496Q96IT1 587 aaPredicted RBP22.55■■□□□ 1.2
RPL39-202ENST00000468844 BCL2L13Q9BXK5 485 aa22.55■■□□□ 1.2
RPL39-202ENST00000468844 SSH1Q8WYL5 1049 aa22.55■■□□□ 1.2
RPL39-202ENST00000468844 KCNQ2O43526 872 aa22.54■■□□□ 1.2
RPL39-202ENST00000468844 KRT27Q7Z3Y8 459 aa22.53■■□□□ 1.2
RPL39-202ENST00000468844 ASAP1Q9ULH1 1129 aa22.53■■□□□ 1.2
RPL39-202ENST00000468844 GIGYF1O75420 1035 aaPredicted RBP22.53■■□□□ 1.2
RPL39-202ENST00000468844 SOS1Q07889 1333 aaPredicted RBP22.52■■□□□ 1.2
RPL39-202ENST00000468844 ALDH1L2Q3SY69 923 aa22.52■■□□□ 1.2
RPL39-202ENST00000468844 ATG3Q9NT62 314 aa22.52■■□□□ 1.2
RPL39-202ENST00000468844 TJP1Q07157 1748 aa22.51■■□□□ 1.19
RPL39-202ENST00000468844 PRAMEF22A3QJZ6 481 aa22.51■■□□□ 1.19
RPL39-202ENST00000468844 HOXB7P09629 217 aa22.51■■□□□ 1.19
RPL39-202ENST00000468844 FMNL2Q96PY5 1086 aa22.51■■□□□ 1.19
RPL39-202ENST00000468844 RRP1P56182 461 aaKnown RBP22.51■■□□□ 1.19
RPL39-202ENST00000468844 SMC4Q9NTJ3 1288 aa22.51■■□□□ 1.19
RPL39-202ENST00000468844 LY75O60449 1722 aa22.5■■□□□ 1.19
RPL39-202ENST00000468844 TCERG1O14776 1098 aaKnown RBP22.5■■□□□ 1.19
RPL39-202ENST00000468844 PTF1AQ7RTS3 328 aa22.49■■□□□ 1.19
RPL39-202ENST00000468844 CICQ96RK0 1608 aaPredicted RBP22.49■■□□□ 1.19
RPL39-202ENST00000468844 PTCD1O75127 700 aaKnown RBP22.49■■□□□ 1.19
RPL39-202ENST00000468844 ZNF831Q5JPB2 1677 aa22.48■■□□□ 1.19
RPL39-202ENST00000468844 PLIN1O60240 522 aa22.48■■□□□ 1.19
RPL39-202ENST00000468844 HDGFL1Q5TGJ6 251 aa22.47■■□□□ 1.19
RPL39-202ENST00000468844 NECTIN2Q92692 538 aa22.47■■□□□ 1.19
RPL39-202ENST00000468844 COL5A3P25940 1745 aaPredicted RBP22.46■■□□□ 1.19
RPL39-202ENST00000468844 SNRPA1P09661 255 aaKnown RBP22.46■■□□□ 1.19
RPL39-202ENST00000468844 EIF2S2P20042 333 aaKnown RBP22.46■■□□□ 1.19
RPL39-202ENST00000468844 BRPF1P55201 1214 aaPredicted RBP22.46■■□□□ 1.19
RPL39-202ENST00000468844 MRPL50Q8N5N7 158 aaKnown RBP22.46■■□□□ 1.19
RPL39-202ENST00000468844 FAM196AQ6ZSG2 479 aa22.45■■□□□ 1.18
RPL39-202ENST00000468844 TAF1LQ8IZX4 1826 aa22.45■■□□□ 1.18
RPL39-202ENST00000468844 CCDC30Q5VVM6 783 aa22.45■■□□□ 1.18
RPL39-202ENST00000468844 MYH14Q7Z406 1995 aaKnown RBP22.44■■□□□ 1.18
RPL39-202ENST00000468844 FRAT1Q92837 279 aaPredicted RBP22.44■■□□□ 1.18
RPL39-202ENST00000468844 PALLDQ8WX93 1383 aa22.44■■□□□ 1.18
RPL39-202ENST00000468844 SLC4A9Q96Q91 983 aa22.43■■□□□ 1.18
RPL39-202ENST00000468844 USP16Q9Y5T5 823 aa22.43■■□□□ 1.18
RPL39-202ENST00000468844 KIF16BQ96L93 1317 aa22.43■■□□□ 1.18
RPL39-202ENST00000468844 RBM42Q9BTD8 480 aaKnown RBP22.43■■□□□ 1.18
RPL39-202ENST00000468844 TNS1Q9HBL0 1735 aaKnown RBP22.42■■□□□ 1.18
RPL39-202ENST00000468844 SLC4A2P04920 1241 aa22.42■■□□□ 1.18
RPL39-202ENST00000468844 IRX6P78412 446 aaPredicted RBP22.42■■□□□ 1.18
RPL39-202ENST00000468844 VSIG10Q8N0Z9 540 aa22.42■■□□□ 1.18
RPL39-202ENST00000468844 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms