RNA–Protein interactions for RNA: ENST00000467624.1

ABCA2-214, Transcript of ATP binding cassette subfamily A member 2, humanhuman

TSL 3

Gene ABCA2, Length 302 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA2-214ENST00000467624 RTF1Q92541 710 aaKnown RBP16.54■□□□□ 0.24
ABCA2-214ENST00000467624 MAP3K5Q99683 1374 aa16.53■□□□□ 0.24
ABCA2-214ENST00000467624 ANP32CO43423 234 aa16.53■□□□□ 0.24
ABCA2-214ENST00000467624 WDR43Q15061 677 aaKnown RBP eCLIP16.53■□□□□ 0.24
ABCA2-214ENST00000467624 AKT1S1Q96B36 256 aa16.53■□□□□ 0.24
ABCA2-214ENST00000467624 SCN11AQ9UI33 1791 aa16.53■□□□□ 0.24
ABCA2-214ENST00000467624 MAPK8IP3Q9UPT6 1336 aa16.52■□□□□ 0.24
ABCA2-214ENST00000467624 MSH5O43196 834 aa16.52■□□□□ 0.24
ABCA2-214ENST00000467624 PTCD1O75127 700 aaKnown RBP16.52■□□□□ 0.24
ABCA2-214ENST00000467624 ZNF827Q17R98 1081 aa16.52■□□□□ 0.24
ABCA2-214ENST00000467624 SPON1Q9HCB6 807 aa16.52■□□□□ 0.24
ABCA2-214ENST00000467624 IL17REQ8NFR9 667 aa16.51■□□□□ 0.23
ABCA2-214ENST00000467624 HTATSF1O43719 755 aaKnown RBP16.5■□□□□ 0.23
ABCA2-214ENST00000467624 AK7Q96M32 723 aa16.5■□□□□ 0.23
ABCA2-214ENST00000467624 PDGFDQ9GZP0 370 aaPredicted RBP16.49■□□□□ 0.23
ABCA2-214ENST00000467624 ATF5Q9Y2D1 282 aaPredicted RBP16.49■□□□□ 0.23
ABCA2-214ENST00000467624 VIRMAQ69YN4 1812 aaKnown RBP16.49■□□□□ 0.23
ABCA2-214ENST00000467624 ZBTB7AO95365 584 aa16.48■□□□□ 0.23
ABCA2-214ENST00000467624 SLC39A6Q13433 755 aa16.48■□□□□ 0.23
ABCA2-214ENST00000467624 TTC5Q8N0Z6 440 aa16.48■□□□□ 0.23
ABCA2-214ENST00000467624 FLAD1Q8NFF5 587 aa16.48■□□□□ 0.23
ABCA2-214ENST00000467624 PLEKHF1Q96S99 279 aa16.48■□□□□ 0.23
ABCA2-214ENST00000467624 PPP1R1BQ9UD71 204 aaPredicted RBP16.48■□□□□ 0.23
ABCA2-214ENST00000467624 ITPK1Q13572 414 aa16.47■□□□□ 0.23
ABCA2-214ENST00000467624 MCM10Q7L590 875 aa16.47■□□□□ 0.23
ABCA2-214ENST00000467624 SLC16A10Q8TF71 515 aa16.47■□□□□ 0.23
ABCA2-214ENST00000467624 C5P01031 1676 aa16.46■□□□□ 0.23
ABCA2-214ENST00000467624 NFE2L2Q16236 605 aa16.46■□□□□ 0.23
ABCA2-214ENST00000467624 LINC00116Q8NCU8 138 aa16.46■□□□□ 0.23
ABCA2-214ENST00000467624 MTFR1LQ9H019 292 aa16.46■□□□□ 0.23
ABCA2-214ENST00000467624 ADAMTS8Q9UP79 889 aa16.46■□□□□ 0.23
ABCA2-214ENST00000467624 TAF1LQ8IZX4 1826 aa16.46■□□□□ 0.23
ABCA2-214ENST00000467624 PAPPAQ13219 1627 aa16.45■□□□□ 0.22
ABCA2-214ENST00000467624 BTBD11A6QL63 1104 aa16.45■□□□□ 0.22
ABCA2-214ENST00000467624 PNPLA7Q6ZV29 1317 aa16.45■□□□□ 0.22
ABCA2-214ENST00000467624 GNPATO15228 680 aa16.44■□□□□ 0.22
ABCA2-214ENST00000467624 PHF14O94880 888 aa16.44■□□□□ 0.22
ABCA2-214ENST00000467624 DCTN1Q14203 1278 aa16.44■□□□□ 0.22
ABCA2-214ENST00000467624 COL23A1Q86Y22 540 aaPredicted RBP16.44■□□□□ 0.22
ABCA2-214ENST00000467624 CCDC146Q8IYE0 955 aa16.44■□□□□ 0.22
ABCA2-214ENST00000467624 RUNDC1Q96C34 613 aa16.44■□□□□ 0.22
ABCA2-214ENST00000467624 SLC4A9Q96Q91 983 aa16.44■□□□□ 0.22
ABCA2-214ENST00000467624 RIPK4P57078 832 aa16.43■□□□□ 0.22
ABCA2-214ENST00000467624 TAF7Q15545 349 aaPredicted RBP16.43■□□□□ 0.22
ABCA2-214ENST00000467624 RC3H1Q5TC82 1133 aaKnown RBP16.43■□□□□ 0.22
ABCA2-214ENST00000467624 ZNF790Q6PG37 636 aa16.43■□□□□ 0.22
ABCA2-214ENST00000467624 RTCBQ9Y3I0 505 aaKnown RBP16.43■□□□□ 0.22
ABCA2-214ENST00000467624 C4BP0C0L5 1744 aa16.42■□□□□ 0.22
ABCA2-214ENST00000467624 CEMIPQ8WUJ3 1361 aa16.42■□□□□ 0.22
ABCA2-214ENST00000467624 NEUROD2Q15784 382 aa16.42■□□□□ 0.22
ABCA2-214ENST00000467624 ADAMTS7Q9UKP4 1686 aa16.42■□□□□ 0.22
ABCA2-214ENST00000467624 CASZ1Q86V15 1759 aa16.41■□□□□ 0.22
ABCA2-214ENST00000467624 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.41■□□□□ 0.22
ABCA2-214ENST00000467624 SSFA2P28290 1259 aa16.41■□□□□ 0.22
ABCA2-214ENST00000467624 POLD1P28340 1107 aa16.41■□□□□ 0.22
ABCA2-214ENST00000467624 TRAPPC3LQ5T215 181 aa16.41■□□□□ 0.22
ABCA2-214ENST00000467624 VSIG10Q8N0Z9 540 aa16.41■□□□□ 0.22
ABCA2-214ENST00000467624 MRC1P22897 1456 aa16.41■□□□□ 0.22
ABCA2-214ENST00000467624 LRP5O75197 1615 aa16.41■□□□□ 0.22
ABCA2-214ENST00000467624 QSER1Q2KHR3 1735 aa16.4■□□□□ 0.22
ABCA2-214ENST00000467624 RPS6KA4O75676 772 aa16.4■□□□□ 0.22
ABCA2-214ENST00000467624 TMPOP42166 694 aaKnown RBP16.4■□□□□ 0.22
ABCA2-214ENST00000467624 CRKLP46109 303 aaKnown RBP16.4■□□□□ 0.22
ABCA2-214ENST00000467624 LMOD3Q0VAK6 560 aa16.4■□□□□ 0.22
ABCA2-214ENST00000467624 DNAJC10Q8IXB1 793 aa16.4■□□□□ 0.22
ABCA2-214ENST00000467624 PNISRQ8TF01 805 aaKnown RBP16.4■□□□□ 0.22
ABCA2-214ENST00000467624 FMNL2Q96PY5 1086 aa16.4■□□□□ 0.22
ABCA2-214ENST00000467624 TEX13AQ9BXU3 409 aaPredicted RBP16.4■□□□□ 0.22
ABCA2-214ENST00000467624 MRS2Q9HD23 443 aa16.4■□□□□ 0.22
ABCA2-214ENST00000467624 DLG5Q8TDM6 1919 aa16.4■□□□□ 0.22
ABCA2-214ENST00000467624 ZNF831Q5JPB2 1677 aa16.4■□□□□ 0.22
ABCA2-214ENST00000467624 STARD3NLO95772 234 aa16.39■□□□□ 0.21
ABCA2-214ENST00000467624 SMIM5Q71RC9 77 aa16.39■□□□□ 0.21
ABCA2-214ENST00000467624 ZNF496Q96IT1 587 aaPredicted RBP16.39■□□□□ 0.21
ABCA2-214ENST00000467624 RRP7AQ9Y3A4 280 aaKnown RBP16.39■□□□□ 0.21
ABCA2-214ENST00000467624 CNTNAP4Q9C0A0 1308 aa16.39■□□□□ 0.21
ABCA2-214ENST00000467624 RFC4P35249 363 aa16.38■□□□□ 0.21
ABCA2-214ENST00000467624 CCDC184Q52MB2 194 aa16.38■□□□□ 0.21
ABCA2-214ENST00000467624 CCDC87Q9NVE4 849 aa16.38■□□□□ 0.21
ABCA2-214ENST00000467624 TUBGCP6Q96RT7 1819 aa16.38■□□□□ 0.21
ABCA2-214ENST00000467624 KCNQ3O43525 872 aa16.37■□□□□ 0.21
ABCA2-214ENST00000467624 CYP19A1P11511 503 aaPredicted RBP16.37■□□□□ 0.21
ABCA2-214ENST00000467624 PTGER2P43116 358 aa16.37■□□□□ 0.21
ABCA2-214ENST00000467624 ARXQ96QS3 562 aa16.37■□□□□ 0.21
ABCA2-214ENST00000467624 THUMPD2Q9BTF0 503 aaKnown RBP16.37■□□□□ 0.21
ABCA2-214ENST00000467624 MIS18AQ9NYP9 233 aa16.37■□□□□ 0.21
ABCA2-214ENST00000467624 SIPA1L3O60292 1781 aaPredicted RBP16.36■□□□□ 0.21
ABCA2-214ENST00000467624 ADRA2BP18089 450 aa16.36■□□□□ 0.21
ABCA2-214ENST00000467624 MSL1Q68DK7 614 aa16.36■□□□□ 0.21
ABCA2-214ENST00000467624 ARHGEF1Q92888 912 aaKnown RBP16.36■□□□□ 0.21
ABCA2-214ENST00000467624 HEG1Q9ULI3 1381 aa16.36■□□□□ 0.21
ABCA2-214ENST00000467624 UBR3Q6ZT12 1888 aa16.35■□□□□ 0.21
ABCA2-214ENST00000467624 INTS5Q6P9B9 1019 aaKnown RBP16.35■□□□□ 0.21
ABCA2-214ENST00000467624 NPM2Q86SE8 214 aaKnown RBP16.35■□□□□ 0.21
ABCA2-214ENST00000467624 AMIGO3Q86WK7 504 aa16.35■□□□□ 0.21
ABCA2-214ENST00000467624 COL5A3P25940 1745 aaPredicted RBP16.34■□□□□ 0.21
ABCA2-214ENST00000467624 APAF1O14727 1248 aa16.34■□□□□ 0.21
ABCA2-214ENST00000467624 SNRPA1P09661 255 aaKnown RBP16.34■□□□□ 0.21
ABCA2-214ENST00000467624 CANXP27824 592 aaKnown RBP16.34■□□□□ 0.21
ABCA2-214ENST00000467624 SGIP1Q9BQI5 828 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms