RNA–Protein interactions for RNA: ENST00000467318.5

DDX56-208, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,665 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-208ENST00000467318 MRC1P22897 1456 aa19.23■□□□□ 0.67
DDX56-208ENST00000467318 KAT6BQ8WYB5 2073 aa19.23■□□□□ 0.67
DDX56-208ENST00000467318 TOGARAM1Q9Y4F4 1720 aa19.23■□□□□ 0.67
DDX56-208ENST00000467318 VIRMAQ69YN4 1812 aaKnown RBP19.23■□□□□ 0.67
DDX56-208ENST00000467318 SYTL4Q96C24 671 aaPredicted RBP19.23■□□□□ 0.67
DDX56-208ENST00000467318 ACSBG1Q96GR2 724 aa19.23■□□□□ 0.67
DDX56-208ENST00000467318 GOLGA2Q08379 1002 aa19.22■□□□□ 0.67
DDX56-208ENST00000467318 CFAP44Q96MT7 982 aa19.22■□□□□ 0.67
DDX56-208ENST00000467318 GNAI1P63096 354 aa19.21■□□□□ 0.67
DDX56-208ENST00000467318 IFT57Q9NWB7 429 aa19.21■□□□□ 0.67
DDX56-208ENST00000467318 DOT1LQ8TEK3 1739 aa19.21■□□□□ 0.67
DDX56-208ENST00000467318 PIGBQ92521 554 aa19.2■□□□□ 0.66
DDX56-208ENST00000467318 BCL11BQ9C0K0 894 aaPredicted RBP19.2■□□□□ 0.66
DDX56-208ENST00000467318 BTBD11A6QL63 1104 aa19.2■□□□□ 0.66
DDX56-208ENST00000467318 KCNQ2O43526 872 aa19.2■□□□□ 0.66
DDX56-208ENST00000467318 CHL1O00533 1208 aa19.19■□□□□ 0.66
DDX56-208ENST00000467318 ZNF853P0CG23 659 aa19.19■□□□□ 0.66
DDX56-208ENST00000467318 LAS1LQ9Y4W2 734 aaKnown RBP19.18■□□□□ 0.66
DDX56-208ENST00000467318 ITGB4P16144 1822 aa19.18■□□□□ 0.66
DDX56-208ENST00000467318 SBF2Q86WG5 1849 aa19.18■□□□□ 0.66
DDX56-208ENST00000467318 E9PSI1 815 aa19.17■□□□□ 0.66
DDX56-208ENST00000467318 NEFLP07196 543 aa19.17■□□□□ 0.66
DDX56-208ENST00000467318 NHSQ6T4R5 1651 aa19.17■□□□□ 0.66
DDX56-208ENST00000467318 SIPA1L3O60292 1781 aaPredicted RBP19.17■□□□□ 0.66
DDX56-208ENST00000467318 TRIM37O94972 964 aa19.17■□□□□ 0.66
DDX56-208ENST00000467318 ZNF790Q6PG37 636 aa19.17■□□□□ 0.66
DDX56-208ENST00000467318 MYH16Q9H6N6 1097 aa19.17■□□□□ 0.66
DDX56-208ENST00000467318 TSPYL4Q9UJ04 414 aa19.17■□□□□ 0.66
DDX56-208ENST00000467318 SLFN5Q08AF3 891 aa19.15■□□□□ 0.66
DDX56-208ENST00000467318 TTC5Q8N0Z6 440 aa19.15■□□□□ 0.66
DDX56-208ENST00000467318 SMARCC1Q92922 1105 aaPredicted RBP19.15■□□□□ 0.66
DDX56-208ENST00000467318 MIS18AQ9NYP9 233 aa19.15■□□□□ 0.66
DDX56-208ENST00000467318 MBIPQ9NS73 344 aa19.14■□□□□ 0.66
DDX56-208ENST00000467318 SPINK5Q9NQ38 1064 aaPredicted RBP19.14■□□□□ 0.65
DDX56-208ENST00000467318 ATG3Q9NT62 314 aa19.14■□□□□ 0.65
DDX56-208ENST00000467318 ASAP1Q9ULH1 1129 aa19.14■□□□□ 0.65
DDX56-208ENST00000467318 SLC39A6Q13433 755 aa19.13■□□□□ 0.65
DDX56-208ENST00000467318 CDCA7LQ96GN5 454 aa19.13■□□□□ 0.65
DDX56-208ENST00000467318 TRMT2AQ8IZ69 625 aaKnown RBP19.12■□□□□ 0.65
DDX56-208ENST00000467318 CCDC125Q86Z20 511 aa19.11■□□□□ 0.65
DDX56-208ENST00000467318 FANCIQ9NVI1 1328 aa19.11■□□□□ 0.65
DDX56-208ENST00000467318 TSR2Q969E8 191 aaKnown RBP19.11■□□□□ 0.65
DDX56-208ENST00000467318 BTAF1O14981 1849 aa19.1■□□□□ 0.65
DDX56-208ENST00000467318 KDM3BQ7LBC6 1761 aa19.1■□□□□ 0.65
DDX56-208ENST00000467318 EIF4A1P60842 406 aaKnown RBP19.1■□□□□ 0.65
DDX56-208ENST00000467318 FMNL2Q96PY5 1086 aa19.1■□□□□ 0.65
DDX56-208ENST00000467318 PALLDQ8WX93 1383 aa19.09■□□□□ 0.65
DDX56-208ENST00000467318 PLSCR1O15162 318 aa19.09■□□□□ 0.65
DDX56-208ENST00000467318 KCNQ3O43525 872 aa19.09■□□□□ 0.65
DDX56-208ENST00000467318 SF3B2Q13435 895 aaKnown RBP19.09■□□□□ 0.65
DDX56-208ENST00000467318 DUSP27Q5VZP5 1158 aa19.09■□□□□ 0.65
DDX56-208ENST00000467318 PAPPAQ13219 1627 aa19.09■□□□□ 0.65
DDX56-208ENST00000467318 APBA3O96018 575 aa19.08■□□□□ 0.65
DDX56-208ENST00000467318 VSIG10Q8N0Z9 540 aa19.08■□□□□ 0.65
DDX56-208ENST00000467318 ZNF496Q96IT1 587 aaPredicted RBP19.08■□□□□ 0.65
DDX56-208ENST00000467318 PTCD1O75127 700 aaKnown RBP19.08■□□□□ 0.64
DDX56-208ENST00000467318 RBM42Q9BTD8 480 aaKnown RBP19.07■□□□□ 0.64
DDX56-208ENST00000467318 HEG1Q9ULI3 1381 aa19.06■□□□□ 0.64
DDX56-208ENST00000467318 TNS1Q9HBL0 1735 aaKnown RBP19.06■□□□□ 0.64
DDX56-208ENST00000467318 LOC102724428A0A0B4J2F2 783 aa19.06■□□□□ 0.64
DDX56-208ENST00000467318 HMGB2P26583 209 aaKnown RBP19.06■□□□□ 0.64
DDX56-208ENST00000467318 SIK1P57059 783 aa19.06■□□□□ 0.64
DDX56-208ENST00000467318 SOS1Q07889 1333 aaPredicted RBP19.06■□□□□ 0.64
DDX56-208ENST00000467318 UBR2Q8IWV8 1755 aa19.06■□□□□ 0.64
DDX56-208ENST00000467318 KCPQ6ZWJ8 1503 aa19.05■□□□□ 0.64
DDX56-208ENST00000467318 SNRPA1P09661 255 aaKnown RBP19.05■□□□□ 0.64
DDX56-208ENST00000467318 FKBP8Q14318 412 aa19.05■□□□□ 0.64
DDX56-208ENST00000467318 TEX13AQ9BXU3 409 aaPredicted RBP19.05■□□□□ 0.64
DDX56-208ENST00000467318 GIGYF1O75420 1035 aaPredicted RBP19.05■□□□□ 0.64
DDX56-208ENST00000467318 HOXB7P09629 217 aa19.05■□□□□ 0.64
DDX56-208ENST00000467318 EXOSC9Q06265 439 aaKnown RBP19.05■□□□□ 0.64
DDX56-208ENST00000467318 CHMP4AQ9BY43 222 aa19.05■□□□□ 0.64
DDX56-208ENST00000467318 BAG6P46379 1132 aa19.04■□□□□ 0.64
DDX56-208ENST00000467318 CT47B1P0C2W7 299 aaPredicted RBP19.03■□□□□ 0.64
DDX56-208ENST00000467318 ATP6V1AP38606 617 aa19.03■□□□□ 0.64
DDX56-208ENST00000467318 KCNQ4P56696 695 aa19.03■□□□□ 0.64
DDX56-208ENST00000467318 SLC27A3Q5K4L6 730 aa19.03■□□□□ 0.64
DDX56-208ENST00000467318 C8orf58Q8NAV2 365 aa19.03■□□□□ 0.64
DDX56-208ENST00000467318 TWISTNBQ3B726 338 aaPredicted RBP19.02■□□□□ 0.64
DDX56-208ENST00000467318 KRT24Q2M2I5 525 aa19.01■□□□□ 0.63
DDX56-208ENST00000467318 DEFB132Q7Z7B7 95 aa19.01■□□□□ 0.63
DDX56-208ENST00000467318 UPF1Q92900 1129 aaKnown RBP eCLIP19.01■□□□□ 0.63
DDX56-208ENST00000467318 SLC4A9Q96Q91 983 aa19.01■□□□□ 0.63
DDX56-208ENST00000467318 CCNL1Q9UK58 526 aaPredicted RBP19.01■□□□□ 0.63
DDX56-208ENST00000467318 LY75O60449 1722 aa19.01■□□□□ 0.63
DDX56-208ENST00000467318 ZNF831Q5JPB2 1677 aa19.01■□□□□ 0.63
DDX56-208ENST00000467318 ELL2O00472 640 aaPredicted RBP19.01■□□□□ 0.63
DDX56-208ENST00000467318 TSPYL6Q8N831 410 aa19.01■□□□□ 0.63
DDX56-208ENST00000467318 STARD3NLO95772 234 aa19■□□□□ 0.63
DDX56-208ENST00000467318 TXNRD1Q16881 649 aa19■□□□□ 0.63
DDX56-208ENST00000467318 ZNF428Q96B54 188 aa19■□□□□ 0.63
DDX56-208ENST00000467318 RGPD3A6NKT7 1758 aaPredicted RBP18.99■□□□□ 0.63
DDX56-208ENST00000467318 RGPD4Q7Z3J3 1758 aa18.99■□□□□ 0.63
DDX56-208ENST00000467318 EN1Q05925 392 aaPredicted RBP18.99■□□□□ 0.63
DDX56-208ENST00000467318 VAMP4O75379 141 aa18.98■□□□□ 0.63
DDX56-208ENST00000467318 ERICH6BQ5W0A0 696 aa18.98■□□□□ 0.63
DDX56-208ENST00000467318 DNAJC10Q8IXB1 793 aa18.98■□□□□ 0.63
DDX56-208ENST00000467318 PROM2Q8N271 834 aa18.98■□□□□ 0.63
DDX56-208ENST00000467318 CAMKK2Q96RR4 588 aa18.98■□□□□ 0.63
DDX56-208ENST00000467318 USP16Q9Y5T5 823 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 145.3 ms