RNA–Protein interactions for RNA: ENST00000467062.5

SNAPC3-205, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-205ENST00000467062 TBC1D9Q6ZT07 1266 aa22.06■■□□□ 1.12
SNAPC3-205ENST00000467062 MEIS3Q99687 375 aa22.06■■□□□ 1.12
SNAPC3-205ENST00000467062 RBM42Q9BTD8 480 aaKnown RBP22.06■■□□□ 1.12
SNAPC3-205ENST00000467062 SMARCA5O60264 1052 aaPredicted RBP22.06■■□□□ 1.12
SNAPC3-205ENST00000467062 FOXD4L1Q9NU39 408 aa22.06■■□□□ 1.12
SNAPC3-205ENST00000467062 C14orf37Q86TY3 774 aa22.05■■□□□ 1.12
SNAPC3-205ENST00000467062 MYRIPQ8NFW9 859 aa22.05■■□□□ 1.12
SNAPC3-205ENST00000467062 TSPYL4Q9UJ04 414 aa22.05■■□□□ 1.12
SNAPC3-205ENST00000467062 KCNA6P17658 529 aa22.04■■□□□ 1.12
SNAPC3-205ENST00000467062 RTF1Q92541 710 aaKnown RBP22.04■■□□□ 1.12
SNAPC3-205ENST00000467062 CHMP4BQ9H444 224 aaKnown RBP22.04■■□□□ 1.12
SNAPC3-205ENST00000467062 GSPT1P15170 499 aaKnown RBP22.03■■□□□ 1.12
SNAPC3-205ENST00000467062 CD2BP2O95400 341 aaKnown RBP22.03■■□□□ 1.12
SNAPC3-205ENST00000467062 CBX1P83916 185 aa22.02■■□□□ 1.12
SNAPC3-205ENST00000467062 INTS3Q68E01 1043 aaKnown RBP22.02■■□□□ 1.12
SNAPC3-205ENST00000467062 TMEM51Q9NW97 253 aa22.02■■□□□ 1.12
SNAPC3-205ENST00000467062 ITSN1Q15811 1721 aa22.02■■□□□ 1.12
SNAPC3-205ENST00000467062 PLEKHM2Q8IWE5 1019 aa22.01■■□□□ 1.11
SNAPC3-205ENST00000467062 TBX22Q9Y458 520 aa22.01■■□□□ 1.11
SNAPC3-205ENST00000467062 AKAP12Q02952 1782 aa22.01■■□□□ 1.11
SNAPC3-205ENST00000467062 TAF7LQ5H9L4 462 aa22.01■■□□□ 1.11
SNAPC3-205ENST00000467062 USHBP1Q8N6Y0 703 aa22.01■■□□□ 1.11
SNAPC3-205ENST00000467062 RBSNQ9H1K0 784 aa22.01■■□□□ 1.11
SNAPC3-205ENST00000467062 PEAK1Q9H792 1746 aa22.01■■□□□ 1.11
SNAPC3-205ENST00000467062 PRIMPOLQ96LW4 560 aa22■■□□□ 1.11
SNAPC3-205ENST00000467062 KIF2CQ99661 725 aa22■■□□□ 1.11
SNAPC3-205ENST00000467062 DCTPP1Q9H773 170 aa22■■□□□ 1.11
SNAPC3-205ENST00000467062 KNDC1Q76NI1 1749 aa22■■□□□ 1.11
SNAPC3-205ENST00000467062 MSH6P52701 1360 aa22■■□□□ 1.11
SNAPC3-205ENST00000467062 USP31Q70CQ4 1352 aa22■■□□□ 1.11
SNAPC3-205ENST00000467062 BAG4O95429 457 aaKnown RBP22■■□□□ 1.11
SNAPC3-205ENST00000467062 HMGN5P82970 282 aaKnown RBP22■■□□□ 1.11
SNAPC3-205ENST00000467062 ZSCAN23Q3MJ62 389 aa22■■□□□ 1.11
SNAPC3-205ENST00000467062 CEP85Q6P2H3 762 aa21.99■■□□□ 1.11
SNAPC3-205ENST00000467062 SSFA2P28290 1259 aa21.99■■□□□ 1.11
SNAPC3-205ENST00000467062 RGS12O14924 1447 aa21.99■■□□□ 1.11
SNAPC3-205ENST00000467062 SSH2Q76I76 1423 aa21.99■■□□□ 1.11
SNAPC3-205ENST00000467062 ZBTB7CA1YPR0 619 aa21.98■■□□□ 1.11
SNAPC3-205ENST00000467062 THEMISQ8N1K5 641 aaPredicted RBP21.98■■□□□ 1.11
SNAPC3-205ENST00000467062 ABTB2Q8N961 1025 aa21.98■■□□□ 1.11
SNAPC3-205ENST00000467062 CRB1P82279 1406 aa21.98■■□□□ 1.11
SNAPC3-205ENST00000467062 KIAA2012Q0VF49 1180 aa21.97■■□□□ 1.11
SNAPC3-205ENST00000467062 K7ELQ4 463 aaPredicted RBP21.97■■□□□ 1.11
SNAPC3-205ENST00000467062 CAVIN1Q6NZI2 390 aaKnown RBP21.97■■□□□ 1.11
SNAPC3-205ENST00000467062 ANKRD44Q8N8A2 993 aa21.97■■□□□ 1.11
SNAPC3-205ENST00000467062 FLT4P35916 1363 aa21.96■■□□□ 1.11
SNAPC3-205ENST00000467062 GTF2F1P35269 517 aaKnown RBP eCLIP21.96■■□□□ 1.114e-7■■■■□ 24.6
SNAPC3-205ENST00000467062 TTC21AQ8NDW8 1320 aa21.95■■□□□ 1.1
SNAPC3-205ENST00000467062 DNTTIP2Q5QJE6 756 aaKnown RBP21.95■■□□□ 1.1
SNAPC3-205ENST00000467062 RTL1A6NKG5 1358 aa21.94■■□□□ 1.1
SNAPC3-205ENST00000467062 ZNF710Q8N1W2 664 aa21.94■■□□□ 1.1
SNAPC3-205ENST00000467062 RIMS1Q86UR5 1692 aaKnown RBP21.94■■□□□ 1.1
SNAPC3-205ENST00000467062 SBNO1A3KN83 1393 aa21.94■■□□□ 1.1
SNAPC3-205ENST00000467062 HOXC9P31274 260 aa21.94■■□□□ 1.1
SNAPC3-205ENST00000467062 CEP170BQ9Y4F5 1589 aaPredicted RBP21.93■■□□□ 1.1
SNAPC3-205ENST00000467062 PRIM1P49642 420 aaKnown RBP21.93■■□□□ 1.1
SNAPC3-205ENST00000467062 TSHZ3Q63HK5 1081 aa21.93■■□□□ 1.1
SNAPC3-205ENST00000467062 ATP10DQ9P241 1426 aa21.93■■□□□ 1.1
SNAPC3-205ENST00000467062 KIAA0232Q92628 1395 aa21.93■■□□□ 1.1
SNAPC3-205ENST00000467062 NRKQ7Z2Y5 1582 aa21.93■■□□□ 1.1
SNAPC3-205ENST00000467062 TRHP20396 242 aaPredicted RBP21.93■■□□□ 1.1
SNAPC3-205ENST00000467062 CDC45O75419 566 aa21.92■■□□□ 1.1
SNAPC3-205ENST00000467062 IGSF1Q8N6C5 1336 aa21.92■■□□□ 1.1
SNAPC3-205ENST00000467062 RPAP2Q8IXW5 612 aaPredicted RBP21.92■■□□□ 1.1
SNAPC3-205ENST00000467062 PTPRCP08575 1304 aa21.91■■□□□ 1.1
SNAPC3-205ENST00000467062 HAP1P54257 671 aaPredicted RBP21.91■■□□□ 1.1
SNAPC3-205ENST00000467062 ATP2B3Q16720 1220 aa21.91■■□□□ 1.1
SNAPC3-205ENST00000467062 TTC22Q5TAA0 569 aa21.91■■□□□ 1.1
SNAPC3-205ENST00000467062 IL17REQ8NFR9 667 aa21.91■■□□□ 1.1
SNAPC3-205ENST00000467062 ARHGEF10O15013 1369 aa21.91■■□□□ 1.1
SNAPC3-205ENST00000467062 MCTP1Q6DN14 999 aa21.91■■□□□ 1.1
SNAPC3-205ENST00000467062 EXOC6BQ9Y2D4 811 aa21.91■■□□□ 1.1
SNAPC3-205ENST00000467062 FKBP5Q13451 457 aaPredicted RBP21.9■■□□□ 1.1
SNAPC3-205ENST00000467062 GAS2L2Q8NHY3 880 aa21.9■■□□□ 1.1
SNAPC3-205ENST00000467062 PTMAP06454 111 aaKnown RBP21.89■■□□□ 1.09
SNAPC3-205ENST00000467062 SDSP20132 328 aa21.89■■□□□ 1.09
SNAPC3-205ENST00000467062 NUCB2P80303 420 aa21.89■■□□□ 1.09
SNAPC3-205ENST00000467062 RGPD8O14715 1765 aaPredicted RBP21.89■■□□□ 1.09
SNAPC3-205ENST00000467062 GNAT3A8MTJ3 354 aa21.89■■□□□ 1.09
SNAPC3-205ENST00000467062 LMBRD1Q9NUN5 540 aa21.89■■□□□ 1.09
SNAPC3-205ENST00000467062 KIF3AQ9Y496 699 aa21.89■■□□□ 1.09
SNAPC3-205ENST00000467062 TOPAZ1Q8N9V7 1692 aa21.88■■□□□ 1.09
SNAPC3-205ENST00000467062 CDK11BP21127 795 aaKnown RBP21.88■■□□□ 1.09
SNAPC3-205ENST00000467062 LRSAM1Q6UWE0 723 aa21.88■■□□□ 1.09
SNAPC3-205ENST00000467062 STK31Q9BXU1 1019 aa21.88■■□□□ 1.09
SNAPC3-205ENST00000467062 KDRP35968 1356 aa21.87■■□□□ 1.09
SNAPC3-205ENST00000467062 FLIIQ13045 1269 aa21.87■■□□□ 1.09
SNAPC3-205ENST00000467062 DIP2AQ14689 1571 aa21.87■■□□□ 1.09
SNAPC3-205ENST00000467062 KIF24Q5T7B8 1368 aa21.86■■□□□ 1.09
SNAPC3-205ENST00000467062 PDCL2Q8N4E4 241 aa21.85■■□□□ 1.09
SNAPC3-205ENST00000467062 ARHGAP23Q9P227 1491 aa21.84■■□□□ 1.09
SNAPC3-205ENST00000467062 PNMA6EA0A0J9YXQ4 647 aa21.84■■□□□ 1.09
SNAPC3-205ENST00000467062 EIF2S2P20042 333 aaKnown RBP21.84■■□□□ 1.09
SNAPC3-205ENST00000467062 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.84■■□□□ 1.09
SNAPC3-205ENST00000467062 ESCO1Q5FWF5 840 aa21.83■■□□□ 1.09
SNAPC3-205ENST00000467062 PHAXQ9H814 394 aaKnown RBP21.83■■□□□ 1.09
SNAPC3-205ENST00000467062 CGNQ9P2M7 1197 aaKnown RBP21.83■■□□□ 1.09
SNAPC3-205ENST00000467062 RGPD1P0DJD0 1748 aa21.83■■□□□ 1.08
SNAPC3-205ENST00000467062 SLIT1O75093 1534 aa21.82■■□□□ 1.08
SNAPC3-205ENST00000467062 TSC1Q92574 1164 aa21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 939.6 ms