RNA–Protein interactions for RNA: ENST00000466072.5

PCCB-207, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene PCCB, Length 1,844 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-207ENST00000466072 SMARCC1Q92922 1105 aaPredicted RBP23.4■■□□□ 1.34
PCCB-207ENST00000466072 AKT1S1Q96B36 256 aa23.4■■□□□ 1.34
PCCB-207ENST00000466072 MAP3K5Q99683 1374 aa23.4■■□□□ 1.34
PCCB-207ENST00000466072 SLC4A9Q96Q91 983 aa23.4■■□□□ 1.34
PCCB-207ENST00000466072 SLC52A2Q9HAB3 445 aa23.4■■□□□ 1.34
PCCB-207ENST00000466072 SCN11AQ9UI33 1791 aa23.4■■□□□ 1.34
PCCB-207ENST00000466072 LOC102724428A0A0B4J2F2 783 aa23.39■■□□□ 1.33
PCCB-207ENST00000466072 GNAT3A8MTJ3 354 aa23.39■■□□□ 1.33
PCCB-207ENST00000466072 SIK1P57059 783 aa23.39■■□□□ 1.33
PCCB-207ENST00000466072 ANP32CO43423 234 aa23.38■■□□□ 1.33
PCCB-207ENST00000466072 ITPK1Q13572 414 aa23.38■■□□□ 1.33
PCCB-207ENST00000466072 SLC39A6Q13433 755 aa23.37■■□□□ 1.33
PCCB-207ENST00000466072 DCTN1Q14203 1278 aa23.37■■□□□ 1.33
PCCB-207ENST00000466072 RBM42Q9BTD8 480 aaKnown RBP23.36■■□□□ 1.33
PCCB-207ENST00000466072 ADAMTS7Q9UKP4 1686 aa23.36■■□□□ 1.33
PCCB-207ENST00000466072 PTCD1O75127 700 aaKnown RBP23.36■■□□□ 1.33
PCCB-207ENST00000466072 SMIM5Q71RC9 77 aa23.36■■□□□ 1.33
PCCB-207ENST00000466072 MCM10Q7L590 875 aa23.36■■□□□ 1.33
PCCB-207ENST00000466072 CCER2I3L3R5 266 aa23.35■■□□□ 1.33
PCCB-207ENST00000466072 CCDC146Q8IYE0 955 aa23.35■■□□□ 1.33
PCCB-207ENST00000466072 LINC00116Q8NCU8 138 aa23.35■■□□□ 1.33
PCCB-207ENST00000466072 ADAMTS8Q9UP79 889 aa23.35■■□□□ 1.33
PCCB-207ENST00000466072 ATP6V1AP38606 617 aa23.34■■□□□ 1.33
PCCB-207ENST00000466072 AMIGO3Q86WK7 504 aa23.34■■□□□ 1.33
PCCB-207ENST00000466072 MRC1P22897 1456 aa23.34■■□□□ 1.33
PCCB-207ENST00000466072 VIRMAQ69YN4 1812 aaKnown RBP23.33■■□□□ 1.33
PCCB-207ENST00000466072 TFCP2L1Q9NZI6 479 aa23.32■■□□□ 1.32
PCCB-207ENST00000466072 CEMIPQ8WUJ3 1361 aa23.32■■□□□ 1.32
PCCB-207ENST00000466072 PNPLA7Q6ZV29 1317 aa23.31■■□□□ 1.32
PCCB-207ENST00000466072 ZBTB7AO95365 584 aa23.31■■□□□ 1.32
PCCB-207ENST00000466072 C5P01031 1676 aa23.3■■□□□ 1.32
PCCB-207ENST00000466072 WDR43Q15061 677 aaKnown RBP eCLIP23.3■■□□□ 1.32
PCCB-207ENST00000466072 TAF1LQ8IZX4 1826 aa23.3■■□□□ 1.32
PCCB-207ENST00000466072 CASZ1Q86V15 1759 aa23.3■■□□□ 1.32
PCCB-207ENST00000466072 TEFQ10587 303 aa23.29■■□□□ 1.32
PCCB-207ENST00000466072 NFE2L2Q16236 605 aa23.29■■□□□ 1.32
PCCB-207ENST00000466072 THUMPD2Q9BTF0 503 aaKnown RBP23.29■■□□□ 1.32
PCCB-207ENST00000466072 MAPK8IP3Q9UPT6 1336 aa23.28■■□□□ 1.32
PCCB-207ENST00000466072 KCNQ3O43525 872 aa23.28■■□□□ 1.32
PCCB-207ENST00000466072 RTF1Q92541 710 aaKnown RBP23.28■■□□□ 1.32
PCCB-207ENST00000466072 ATF5Q9Y2D1 282 aaPredicted RBP23.28■■□□□ 1.32
PCCB-207ENST00000466072 RRP7AQ9Y3A4 280 aaKnown RBP23.28■■□□□ 1.32
PCCB-207ENST00000466072 TUBGCP6Q96RT7 1819 aa23.28■■□□□ 1.32
PCCB-207ENST00000466072 NEFMP07197 916 aa23.27■■□□□ 1.32
PCCB-207ENST00000466072 C4BP0C0L5 1744 aa23.27■■□□□ 1.32
PCCB-207ENST00000466072 COL23A1Q86Y22 540 aaPredicted RBP23.26■■□□□ 1.31
PCCB-207ENST00000466072 PNNQ9H307 717 aaKnown RBP23.26■■□□□ 1.31
PCCB-207ENST00000466072 KCPQ6ZWJ8 1503 aa23.25■■□□□ 1.31
PCCB-207ENST00000466072 AK7Q96M32 723 aa23.24■■□□□ 1.31
PCCB-207ENST00000466072 DLG5Q8TDM6 1919 aa23.24■■□□□ 1.31
PCCB-207ENST00000466072 HTATSF1O43719 755 aaKnown RBP23.24■■□□□ 1.31
PCCB-207ENST00000466072 PHF14O94880 888 aa23.24■■□□□ 1.31
PCCB-207ENST00000466072 TMPOP42166 694 aaKnown RBP23.24■■□□□ 1.31
PCCB-207ENST00000466072 DNAJC10Q8IXB1 793 aa23.24■■□□□ 1.31
PCCB-207ENST00000466072 MIS18AQ9NYP9 233 aa23.24■■□□□ 1.31
PCCB-207ENST00000466072 SIPA1L3O60292 1781 aaPredicted RBP23.23■■□□□ 1.31
PCCB-207ENST00000466072 RIPK4P57078 832 aa23.23■■□□□ 1.31
PCCB-207ENST00000466072 NEUROD2Q15784 382 aa23.23■■□□□ 1.31
PCCB-207ENST00000466072 ZNF790Q6PG37 636 aa23.23■■□□□ 1.31
PCCB-207ENST00000466072 RUNDC1Q96C34 613 aa23.23■■□□□ 1.31
PCCB-207ENST00000466072 SENP3-EIF4A1A0A087X0R7 540 aa23.22■■□□□ 1.31
PCCB-207ENST00000466072 BTBD11A6QL63 1104 aa23.22■■□□□ 1.31
PCCB-207ENST00000466072 MSH5O43196 834 aa23.22■■□□□ 1.31
PCCB-207ENST00000466072 ZNF496Q96IT1 587 aaPredicted RBP23.22■■□□□ 1.31
PCCB-207ENST00000466072 SPON1Q9HCB6 807 aa23.22■■□□□ 1.31
PCCB-207ENST00000466072 GNPATO15228 680 aa23.22■■□□□ 1.31
PCCB-207ENST00000466072 MRS2Q9HD23 443 aa23.22■■□□□ 1.31
PCCB-207ENST00000466072 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.2■■□□□ 1.3
PCCB-207ENST00000466072 PTGER2P43116 358 aa23.2■■□□□ 1.3
PCCB-207ENST00000466072 TJP1Q07157 1748 aa23.2■■□□□ 1.3
PCCB-207ENST00000466072 LRP5O75197 1615 aa23.2■■□□□ 1.3
PCCB-207ENST00000466072 TTC5Q8N0Z6 440 aa23.19■■□□□ 1.3
PCCB-207ENST00000466072 PNISRQ8TF01 805 aaKnown RBP23.19■■□□□ 1.3
PCCB-207ENST00000466072 CRKLP46109 303 aaKnown RBP23.19■■□□□ 1.3
PCCB-207ENST00000466072 MTFR1LQ9H019 292 aa23.19■■□□□ 1.3
PCCB-207ENST00000466072 ZNF831Q5JPB2 1677 aa23.19■■□□□ 1.3
PCCB-207ENST00000466072 COL5A3P25940 1745 aaPredicted RBP23.18■■□□□ 1.3
PCCB-207ENST00000466072 QSER1Q2KHR3 1735 aa23.18■■□□□ 1.3
PCCB-207ENST00000466072 UBR3Q6ZT12 1888 aa23.17■■□□□ 1.3
PCCB-207ENST00000466072 TAF7Q15545 349 aaPredicted RBP23.17■■□□□ 1.3
PCCB-207ENST00000466072 INTS5Q6P9B9 1019 aaKnown RBP23.17■■□□□ 1.3
PCCB-207ENST00000466072 SGIP1Q9BQI5 828 aa23.17■■□□□ 1.3
PCCB-207ENST00000466072 MYH14Q7Z406 1995 aaKnown RBP23.17■■□□□ 1.3
PCCB-207ENST00000466072 PRAMEF22A3QJZ6 481 aa23.17■■□□□ 1.3
PCCB-207ENST00000466072 CYP19A1P11511 503 aaPredicted RBP23.17■■□□□ 1.3
PCCB-207ENST00000466072 MSL1Q68DK7 614 aa23.17■■□□□ 1.3
PCCB-207ENST00000466072 TRIM35Q9UPQ4 493 aa23.17■■□□□ 1.3
PCCB-207ENST00000466072 CNTNAP4Q9C0A0 1308 aa23.17■■□□□ 1.3
PCCB-207ENST00000466072 UBR2Q8IWV8 1755 aa23.16■■□□□ 1.3
PCCB-207ENST00000466072 APAF1O14727 1248 aa23.16■■□□□ 1.3
PCCB-207ENST00000466072 RC3H1Q5TC82 1133 aaKnown RBP23.16■■□□□ 1.3
PCCB-207ENST00000466072 HEG1Q9ULI3 1381 aa23.14■■□□□ 1.29
PCCB-207ENST00000466072 SSFA2P28290 1259 aa23.14■■□□□ 1.29
PCCB-207ENST00000466072 VSIG10Q8N0Z9 540 aa23.14■■□□□ 1.29
PCCB-207ENST00000466072 RTCBQ9Y3I0 505 aaKnown RBP23.14■■□□□ 1.29
PCCB-207ENST00000466072 RPS6KA4O75676 772 aa23.13■■□□□ 1.29
PCCB-207ENST00000466072 SLC16A10Q8TF71 515 aa23.13■■□□□ 1.29
PCCB-207ENST00000466072 FMNL2Q96PY5 1086 aa23.13■■□□□ 1.29
PCCB-207ENST00000466072 ARHGEF1Q92888 912 aaKnown RBP23.12■■□□□ 1.29
PCCB-207ENST00000466072 HMGB2P26583 209 aaKnown RBP23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms