RNA–Protein interactions for RNA: ENST00000465768.1

SAMM50-202, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 3

Gene SAMM50, Length 169 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-202ENST00000465768 IGHA1P01876 353 aa7.11□□□□□ -1.27
SAMM50-202ENST00000465768 MARSP56192 900 aaKnown RBP7.11□□□□□ -1.27
SAMM50-202ENST00000465768 FOXK2Q01167 660 aa7.11□□□□□ -1.27
SAMM50-202ENST00000465768 MAP3K10Q02779 954 aa7.11□□□□□ -1.27
SAMM50-202ENST00000465768 SRSF11Q05519 484 aaKnown RBP7.11□□□□□ -1.27
SAMM50-202ENST00000465768 DEPDC4Q8N2C3 294 aa7.11□□□□□ -1.27
SAMM50-202ENST00000465768 TRAIPQ9BWF2 469 aa7.11□□□□□ -1.27
SAMM50-202ENST00000465768 TMPRSS4Q9NRS4 437 aa7.11□□□□□ -1.27
SAMM50-202ENST00000465768 FAM196BA6NMK8 535 aa7.1□□□□□ -1.27
SAMM50-202ENST00000465768 ATP5J2-PTCD1G3V325 749 aa7.1□□□□□ -1.27
SAMM50-202ENST00000465768 ERVH48-1M5A8F1 160 aa7.1□□□□□ -1.27
SAMM50-202ENST00000465768 ADAMTS2O95450 1211 aa7.1□□□□□ -1.27
SAMM50-202ENST00000465768 PDIA4P13667 645 aaKnown RBP7.1□□□□□ -1.27
SAMM50-202ENST00000465768 PTGIRP43119 386 aa7.1□□□□□ -1.27
SAMM50-202ENST00000465768 RAB15P59190 212 aa7.1□□□□□ -1.27
SAMM50-202ENST00000465768 ELOAQ14241 798 aaKnown RBP7.1□□□□□ -1.27
SAMM50-202ENST00000465768 LYSMD3Q7Z3D4 306 aa7.1□□□□□ -1.27
SAMM50-202ENST00000465768 WHAMMQ8TF30 809 aa7.1□□□□□ -1.27
SAMM50-202ENST00000465768 GMCL1Q96IK5 515 aa7.1□□□□□ -1.27
SAMM50-202ENST00000465768 IRS1P35568 1242 aa7.09□□□□□ -1.27
SAMM50-202ENST00000465768 TSGA10IPQ3SY00 556 aa7.09□□□□□ -1.27
SAMM50-202ENST00000465768 MKRN1Q9UHC7 482 aaKnown RBP7.09□□□□□ -1.27
SAMM50-202ENST00000465768 USP17L15C9J2P7 530 aa7.08□□□□□ -1.28
SAMM50-202ENST00000465768 USP17L10C9JJH3 530 aa7.08□□□□□ -1.28
SAMM50-202ENST00000465768 USP17L13C9JLJ4 530 aa7.08□□□□□ -1.28
SAMM50-202ENST00000465768 USP17L12C9JPN9 530 aa7.08□□□□□ -1.28
SAMM50-202ENST00000465768 USP17L11C9JVI0 530 aa7.08□□□□□ -1.28
SAMM50-202ENST00000465768 USP17L21D6R901 530 aa7.08□□□□□ -1.28
SAMM50-202ENST00000465768 USP17L18D6R9N7 530 aa7.08□□□□□ -1.28
SAMM50-202ENST00000465768 USP17L22D6RA61 530 aa7.08□□□□□ -1.28
SAMM50-202ENST00000465768 USP17L17D6RBQ6 530 aa7.08□□□□□ -1.28
SAMM50-202ENST00000465768 USP17L19D6RCP7 530 aa7.08□□□□□ -1.28
SAMM50-202ENST00000465768 USP17L20D6RJB6 530 aa7.08□□□□□ -1.28
SAMM50-202ENST00000465768 CSB-PGBD3P0DP91 1061 aa7.08□□□□□ -1.28
SAMM50-202ENST00000465768 PDE4CQ08493 712 aa7.08□□□□□ -1.28
SAMM50-202ENST00000465768 USP17L24Q0WX57 530 aa7.08□□□□□ -1.28
SAMM50-202ENST00000465768 CDCA8Q53HL2 280 aa7.08□□□□□ -1.28
SAMM50-202ENST00000465768 OXLD1Q5BKU9 147 aa7.08□□□□□ -1.28
SAMM50-202ENST00000465768 TRIM50Q86XT4 487 aa7.08□□□□□ -1.28
SAMM50-202ENST00000465768 NOD1Q9Y239 953 aa7.08□□□□□ -1.28
SAMM50-202ENST00000465768 PCDHB11Q9Y5F2 797 aa7.08□□□□□ -1.28
SAMM50-202ENST00000465768 GPC1P35052 558 aa7.07□□□□□ -1.28
SAMM50-202ENST00000465768 RNF144AP50876 292 aaPredicted RBP7.07□□□□□ -1.28
SAMM50-202ENST00000465768 PTK7Q13308 1070 aa7.07□□□□□ -1.28
SAMM50-202ENST00000465768 CRTC2Q53ET0 693 aaPredicted RBP7.07□□□□□ -1.28
SAMM50-202ENST00000465768 KDF1Q8NAX2 398 aaPredicted RBP7.07□□□□□ -1.28
SAMM50-202ENST00000465768 CDCA7Q9BWT1 371 aaPredicted RBP7.07□□□□□ -1.28
SAMM50-202ENST00000465768 ENAMQ9NRM1 1142 aa7.07□□□□□ -1.28
SAMM50-202ENST00000465768 ZMIZ1Q9ULJ6 1067 aa7.07□□□□□ -1.28
SAMM50-202ENST00000465768 TMEM88BA6NKF7 163 aa7.06□□□□□ -1.28
SAMM50-202ENST00000465768 ADD1P35611 737 aaKnown RBP7.06□□□□□ -1.28
SAMM50-202ENST00000465768 ATP1A2P50993 1020 aa7.06□□□□□ -1.28
SAMM50-202ENST00000465768 CLDN10P78369 228 aa7.06□□□□□ -1.28
SAMM50-202ENST00000465768 GAS6Q14393 721 aa7.06□□□□□ -1.28
SAMM50-202ENST00000465768 GPAT2Q6NUI2 795 aa7.06□□□□□ -1.28
SAMM50-202ENST00000465768 LARP1Q6PKG0 1096 aaKnown RBP7.06□□□□□ -1.28
SAMM50-202ENST00000465768 LYPD4Q6UWN0 246 aa7.06□□□□□ -1.28
SAMM50-202ENST00000465768 SIRT1Q96EB6 747 aa7.06□□□□□ -1.28
SAMM50-202ENST00000465768 ZNF837Q96EG3 531 aaPredicted RBP7.06□□□□□ -1.28
SAMM50-202ENST00000465768 CYLDQ9NQC7 956 aa7.06□□□□□ -1.28
SAMM50-202ENST00000465768 MBIPQ9NS73 344 aa7.06□□□□□ -1.28
SAMM50-202ENST00000465768 NOVA2Q9UNW9 492 aaKnown RBP7.06□□□□□ -1.28
SAMM50-202ENST00000465768 RASA1P20936 1047 aa7.05□□□□□ -1.28
SAMM50-202ENST00000465768 ERVK-9P63128 1117 aa7.05□□□□□ -1.28
SAMM50-202ENST00000465768 GTF2IP78347 998 aa7.05□□□□□ -1.28
SAMM50-202ENST00000465768 USP4Q13107 963 aa7.05□□□□□ -1.28
SAMM50-202ENST00000465768 FOXR1Q6PIV2 292 aa7.05□□□□□ -1.28
SAMM50-202ENST00000465768 TRIM22Q8IYM9 498 aa7.05□□□□□ -1.28
SAMM50-202ENST00000465768 SIX5Q8N196 739 aa7.05□□□□□ -1.28
SAMM50-202ENST00000465768 OGFOD1Q8N543 542 aa7.05□□□□□ -1.28
SAMM50-202ENST00000465768 CELA2BP08218 269 aaPredicted RBP7.04□□□□□ -1.28
SAMM50-202ENST00000465768 LARGE2Q8N3Y3 721 aa7.04□□□□□ -1.28
SAMM50-202ENST00000465768 STK32AQ8WU08 396 aa7.04□□□□□ -1.28
SAMM50-202ENST00000465768 DNAAF2Q9NVR5 837 aaKnown RBP7.04□□□□□ -1.28
SAMM50-202ENST00000465768 CUEDC1Q9NWM3 386 aaPredicted RBP7.04□□□□□ -1.28
SAMM50-202ENST00000465768 PHF20L1A8MW92 1017 aa7.03□□□□□ -1.28
SAMM50-202ENST00000465768 H7C1W4 665 aa7.03□□□□□ -1.28
SAMM50-202ENST00000465768 DKK1O94907 266 aa7.03□□□□□ -1.28
SAMM50-202ENST00000465768 MYCP01106 439 aaPredicted RBP7.03□□□□□ -1.28
SAMM50-202ENST00000465768 SCTRP47872 440 aa7.03□□□□□ -1.28
SAMM50-202ENST00000465768 TMEM164Q5U3C3 297 aa7.03□□□□□ -1.28
SAMM50-202ENST00000465768 CC2D2BQ6DHV5 1058 aa7.03□□□□□ -1.28
SAMM50-202ENST00000465768 PRICKLE2Q7Z3G6 844 aa7.03□□□□□ -1.28
SAMM50-202ENST00000465768 ANKMY2Q8IV38 441 aa7.03□□□□□ -1.28
SAMM50-202ENST00000465768 KIAA1024Q9UPX6 916 aa7.03□□□□□ -1.28
SAMM50-202ENST00000465768 PCDHGA11Q9Y5H2 935 aa7.03□□□□□ -1.28
SAMM50-202ENST00000465768 ZBTB7BO15156 539 aaPredicted RBP7.02□□□□□ -1.29
SAMM50-202ENST00000465768 PODNQ7Z5L7 613 aa7.02□□□□□ -1.29
SAMM50-202ENST00000465768 DYRK1BQ9Y463 629 aa7.02□□□□□ -1.29
SAMM50-202ENST00000465768 RHOQP17081 205 aa7.01□□□□□ -1.29
SAMM50-202ENST00000465768 CYP2U1Q7Z449 544 aa7.01□□□□□ -1.29
SAMM50-202ENST00000465768 ZNF594Q96JF6 807 aaPredicted RBP7.01□□□□□ -1.29
SAMM50-202ENST00000465768 TRERF1Q96PN7 1200 aa7.01□□□□□ -1.29
SAMM50-202ENST00000465768 OSBPL3Q9H4L5 887 aa7.01□□□□□ -1.29
SAMM50-202ENST00000465768 LRRC4BQ9NT99 713 aa7.01□□□□□ -1.29
SAMM50-202ENST00000465768 IGF1RP08069 1367 aa7□□□□□ -1.29
SAMM50-202ENST00000465768 MEN1O00255 615 aa7□□□□□ -1.29
SAMM50-202ENST00000465768 DPYDQ12882 1025 aa7□□□□□ -1.29
SAMM50-202ENST00000465768 CCDC102BQ68D86 513 aa7□□□□□ -1.29
SAMM50-202ENST00000465768 FAM200AQ8TCP9 573 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms