RNA–Protein interactions for RNA: ENST00000464867.1

APP-213, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 816 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-213ENST00000464867 ADGRB1O14514 1584 aa13.84□□□□□ -0.19
APP-213ENST00000464867 USP6P35125 1406 aa13.84□□□□□ -0.19
APP-213ENST00000464867 CDAN1Q8IWY9 1227 aa13.84□□□□□ -0.19
APP-213ENST00000464867 BTAF1O14981 1849 aa13.84□□□□□ -0.19
APP-213ENST00000464867 PNPLA7Q6ZV29 1317 aa13.84□□□□□ -0.19
APP-213ENST00000464867 KIF3CO14782 793 aa13.83□□□□□ -0.2
APP-213ENST00000464867 TOMM70O94826 608 aa13.83□□□□□ -0.2
APP-213ENST00000464867 LRRC4BQ9NT99 713 aa13.83□□□□□ -0.2
APP-213ENST00000464867 CCDC7Q96M83 1385 aa13.82□□□□□ -0.2
APP-213ENST00000464867 PPARGC1BQ86YN6 1023 aaKnown RBP13.81□□□□□ -0.2
APP-213ENST00000464867 AXIN2Q9Y2T1 843 aa13.81□□□□□ -0.2
APP-213ENST00000464867 CD2APQ9Y5K6 639 aa13.81□□□□□ -0.2
APP-213ENST00000464867 TNS2Q63HR2 1409 aa13.81□□□□□ -0.2
APP-213ENST00000464867 SLC34A2O95436 690 aa13.8□□□□□ -0.2
APP-213ENST00000464867 KLRG1Q96E93 195 aa13.8□□□□□ -0.2
APP-213ENST00000464867 COL18A1P39060 1754 aa13.79□□□□□ -0.2
APP-213ENST00000464867 HS6ST3Q8IZP7 471 aa13.79□□□□□ -0.2
APP-213ENST00000464867 ARHGEF28Q8N1W1 1705 aaKnown RBP13.78□□□□□ -0.2
APP-213ENST00000464867 RGPD5Q99666 1765 aa13.78□□□□□ -0.2
APP-213ENST00000464867 JMYQ8N9B5 988 aa13.78□□□□□ -0.2
APP-213ENST00000464867 KCNH5Q8NCM2 988 aa13.78□□□□□ -0.2
APP-213ENST00000464867 KDM2AQ9Y2K7 1162 aa13.78□□□□□ -0.2
APP-213ENST00000464867 WDR90Q96KV7 1748 aa13.78□□□□□ -0.2
APP-213ENST00000464867 SLIT3O75094 1523 aa13.77□□□□□ -0.21
APP-213ENST00000464867 SRPK2P78362 688 aaKnown RBP13.77□□□□□ -0.21
APP-213ENST00000464867 CPSF1Q10570 1443 aaKnown RBP13.77□□□□□ -0.21
APP-213ENST00000464867 PPIP5K1Q6PFW1 1433 aa13.77□□□□□ -0.21
APP-213ENST00000464867 TUBGCP6Q96RT7 1819 aa13.77□□□□□ -0.21
APP-213ENST00000464867 WWC3Q9ULE0 1092 aa13.77□□□□□ -0.21
APP-213ENST00000464867 ABCC6O95255 1503 aa13.76□□□□□ -0.21
APP-213ENST00000464867 PPP1R37O75864 691 aa13.76□□□□□ -0.21
APP-213ENST00000464867 EMP3P54852 163 aa13.76□□□□□ -0.21
APP-213ENST00000464867 C16orf71Q8IYS4 520 aaPredicted RBP13.76□□□□□ -0.21
APP-213ENST00000464867 MSL1Q68DK7 614 aa13.75□□□□□ -0.21
APP-213ENST00000464867 ARHGEF25Q86VW2 580 aa13.75□□□□□ -0.21
APP-213ENST00000464867 TRPM1Q7Z4N2 1603 aa13.75□□□□□ -0.21
APP-213ENST00000464867 POTEB3A0JP26 581 aa13.74□□□□□ -0.21
APP-213ENST00000464867 IL2RBP14784 551 aa13.74□□□□□ -0.21
APP-213ENST00000464867 POTEBQ6S5H4 581 aa13.74□□□□□ -0.21
APP-213ENST00000464867 DCAF11Q8TEB1 546 aa13.74□□□□□ -0.21
APP-213ENST00000464867 HMGB2P26583 209 aaKnown RBP13.73□□□□□ -0.21
APP-213ENST00000464867 DOK7Q18PE1 504 aa13.73□□□□□ -0.21
APP-213ENST00000464867 COL23A1Q86Y22 540 aaPredicted RBP13.73□□□□□ -0.21
APP-213ENST00000464867 STAC3Q96MF2 364 aa13.73□□□□□ -0.21
APP-213ENST00000464867 NLRP2Q9NX02 1062 aa13.73□□□□□ -0.21
APP-213ENST00000464867 KCNQ4P56696 695 aa13.72□□□□□ -0.21
APP-213ENST00000464867 RBM46Q8TBY0 533 aaKnown RBP13.72□□□□□ -0.21
APP-213ENST00000464867 SYTL4Q96C24 671 aaPredicted RBP13.72□□□□□ -0.21
APP-213ENST00000464867 PCNTO95613 3336 aa13.71□□□□□ -0.21
APP-213ENST00000464867 IGSF1Q8N6C5 1336 aa13.71□□□□□ -0.21
APP-213ENST00000464867 ZNF710Q8N1W2 664 aa13.71□□□□□ -0.21
APP-213ENST00000464867 FLAD1Q8NFF5 587 aa13.71□□□□□ -0.21
APP-213ENST00000464867 CCNL1Q9UK58 526 aaPredicted RBP13.71□□□□□ -0.21
APP-213ENST00000464867 PIK3C2AO00443 1686 aa13.7□□□□□ -0.22
APP-213ENST00000464867 HOXB1P14653 301 aaPredicted RBP13.7□□□□□ -0.22
APP-213ENST00000464867 HTRA3P83110 453 aa13.7□□□□□ -0.22
APP-213ENST00000464867 FSTL1Q12841 308 aa13.7□□□□□ -0.22
APP-213ENST00000464867 FAM205CA6NFA0 338 aa13.69□□□□□ -0.22
APP-213ENST00000464867 DDX54Q8TDD1 881 aaKnown RBP13.69□□□□□ -0.22
APP-213ENST00000464867 CABP1Q9NZU7 370 aa13.69□□□□□ -0.22
APP-213ENST00000464867 HS3ST6Q96QI5 342 aa13.68□□□□□ -0.22
APP-213ENST00000464867 LY75O60449 1722 aa13.67□□□□□ -0.22
APP-213ENST00000464867 QRICH2Q9H0J4 1663 aa13.67□□□□□ -0.22
APP-213ENST00000464867 PRIM1P49642 420 aaKnown RBP13.67□□□□□ -0.22
APP-213ENST00000464867 NKX1-1Q15270 411 aaPredicted RBP13.67□□□□□ -0.22
APP-213ENST00000464867 NMRK2Q9NPI5 230 aa13.67□□□□□ -0.22
APP-213ENST00000464867 C2orf72A6NCS6 295 aa13.66□□□□□ -0.22
APP-213ENST00000464867 HSPA1AP0DMV8 641 aaKnown RBP13.65□□□□□ -0.22
APP-213ENST00000464867 HSPA1BP0DMV9 641 aaKnown RBP13.65□□□□□ -0.22
APP-213ENST00000464867 ERBB3P21860 1342 aa13.64□□□□□ -0.23
APP-213ENST00000464867 ANKRD36BQ8N2N9 1353 aa13.64□□□□□ -0.23
APP-213ENST00000464867 USP47Q96K76 1375 aa13.63□□□□□ -0.23
APP-213ENST00000464867 RIMBP2O15034 1052 aa13.63□□□□□ -0.23
APP-213ENST00000464867 TTC21AQ8NDW8 1320 aa13.63□□□□□ -0.23
APP-213ENST00000464867 KDM2BQ8NHM5 1336 aa13.63□□□□□ -0.23
APP-213ENST00000464867 GPR153Q6NV75 609 aa13.62□□□□□ -0.23
APP-213ENST00000464867 ARHGAP27Q6ZUM4 889 aa13.62□□□□□ -0.23
APP-213ENST00000464867 TTC21BQ7Z4L5 1316 aa13.62□□□□□ -0.23
APP-213ENST00000464867 CICQ96RK0 1608 aaPredicted RBP13.61□□□□□ -0.23
APP-213ENST00000464867 ANKRD24Q8TF21 1146 aa13.61□□□□□ -0.23
APP-213ENST00000464867 CENPJQ9HC77 1338 aaPredicted RBP13.61□□□□□ -0.23
APP-213ENST00000464867 SMC1BQ8NDV3 1235 aa13.6□□□□□ -0.23
APP-213ENST00000464867 DOT1LQ8TEK3 1739 aa13.6□□□□□ -0.23
APP-213ENST00000464867 ZSWIM6Q9HCJ5 1215 aa13.6□□□□□ -0.23
APP-213ENST00000464867 NFAT5O94916 1531 aa13.59□□□□□ -0.23
APP-213ENST00000464867 PLEKHG2Q9H7P9 1386 aa13.59□□□□□ -0.23
APP-213ENST00000464867 BCS1LQ9Y276 419 aa13.59□□□□□ -0.23
APP-213ENST00000464867 C5P01031 1676 aa13.59□□□□□ -0.23
APP-213ENST00000464867 AK7Q96M32 723 aa13.58□□□□□ -0.24
APP-213ENST00000464867 ARSIQ5FYB1 569 aa13.57□□□□□ -0.24
APP-213ENST00000464867 KRTAP3-3Q9BYR6 98 aa13.57□□□□□ -0.24
APP-213ENST00000464867 KRTAP3-2Q9BYR7 98 aa13.57□□□□□ -0.24
APP-213ENST00000464867 LTN1O94822 1766 aa13.57□□□□□ -0.24
APP-213ENST00000464867 NSD3Q9BZ95 1437 aa13.56□□□□□ -0.24
APP-213ENST00000464867 C9orf131Q5VYM1 1079 aa13.56□□□□□ -0.24
APP-213ENST00000464867 KHSRPQ92945 711 aaKnown RBP eCLIP13.56□□□□□ -0.24
APP-213ENST00000464867 RRAGCQ9HB90 399 aa13.56□□□□□ -0.24
APP-213ENST00000464867 NSD2O96028 1365 aa13.56□□□□□ -0.24
APP-213ENST00000464867 PHF14O94880 888 aa13.55□□□□□ -0.24
APP-213ENST00000464867 TGFB2P61812 414 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms