RNA–Protein interactions for RNA: ENST00000463343.1

SF1-212, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 983 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-212ENST00000463343 C1QTNF8P60827 252 aa23.66■■□□□ 1.38
SF1-212ENST00000463343 GOLGB1Q14789 3259 aaKnown RBP23.65■■□□□ 1.38
SF1-212ENST00000463343 MTHFSDQ2M296 383 aaKnown RBP23.65■■□□□ 1.38
SF1-212ENST00000463343 KLHL34Q8N239 644 aa23.65■■□□□ 1.38
SF1-212ENST00000463343 FCHSD2O94868 740 aa23.64■■□□□ 1.37
SF1-212ENST00000463343 NLGN2Q8NFZ4 835 aa23.64■■□□□ 1.37
SF1-212ENST00000463343 SMARCC1Q92922 1105 aaPredicted RBP23.64■■□□□ 1.37
SF1-212ENST00000463343 PRKAR2BP31323 418 aa23.63■■□□□ 1.37
SF1-212ENST00000463343 PHACTR3Q96KR7 559 aa23.63■■□□□ 1.37
SF1-212ENST00000463343 MSH5O43196 834 aa23.62■■□□□ 1.37
SF1-212ENST00000463343 C1orf141Q5JVX7 400 aa23.62■■□□□ 1.37
SF1-212ENST00000463343 CD2APQ9Y5K6 639 aa23.62■■□□□ 1.37
SF1-212ENST00000463343 PALLDQ8WX93 1383 aa23.62■■□□□ 1.37
SF1-212ENST00000463343 C5P01031 1676 aa23.61■■□□□ 1.37
SF1-212ENST00000463343 HSP90AB1P08238 724 aaKnown RBP23.61■■□□□ 1.37
SF1-212ENST00000463343 MPRIPQ6WCQ1 1025 aa23.61■■□□□ 1.37
SF1-212ENST00000463343 TAF1LQ8IZX4 1826 aa23.61■■□□□ 1.37
SF1-212ENST00000463343 AKAP4Q5JQC9 854 aa23.6■■□□□ 1.37
SF1-212ENST00000463343 DCAF5Q96JK2 942 aa23.6■■□□□ 1.37
SF1-212ENST00000463343 ANP32CO43423 234 aa23.59■■□□□ 1.37
SF1-212ENST00000463343 ERVV-2B6SEH9 535 aa23.58■■□□□ 1.37
SF1-212ENST00000463343 PELP1Q8IZL8 1130 aaKnown RBP23.58■■□□□ 1.37
SF1-212ENST00000463343 PIGBQ92521 554 aa23.58■■□□□ 1.37
SF1-212ENST00000463343 ITGB4P16144 1822 aa23.57■■□□□ 1.36
SF1-212ENST00000463343 YBX3P16989 372 aaKnown RBP eCLIP23.57■■□□□ 1.36
SF1-212ENST00000463343 GAS2L2Q8NHY3 880 aa23.56■■□□□ 1.36
SF1-212ENST00000463343 LGR6Q9HBX8 967 aa23.56■■□□□ 1.36
SF1-212ENST00000463343 KDM6AO15550 1401 aaPredicted RBP23.56■■□□□ 1.36
SF1-212ENST00000463343 GIGYF1O75420 1035 aaPredicted RBP23.55■■□□□ 1.36
SF1-212ENST00000463343 CCDC184Q52MB2 194 aa23.55■■□□□ 1.36
SF1-212ENST00000463343 PLEKHF1Q96S99 279 aa23.55■■□□□ 1.36
SF1-212ENST00000463343 TMOD3Q9NYL9 352 aa23.55■■□□□ 1.36
SF1-212ENST00000463343 TOGARAM1Q9Y4F4 1720 aa23.55■■□□□ 1.36
SF1-212ENST00000463343 SENP3-EIF4A1A0A087X0R7 540 aa23.54■■□□□ 1.36
SF1-212ENST00000463343 RNMTO43148 476 aaKnown RBP23.53■■□□□ 1.36
SF1-212ENST00000463343 MSL1Q68DK7 614 aa23.53■■□□□ 1.36
SF1-212ENST00000463343 AK7Q96M32 723 aa23.53■■□□□ 1.36
SF1-212ENST00000463343 C4BP0C0L5 1744 aa23.53■■□□□ 1.36
SF1-212ENST00000463343 CABP4P57796 275 aa23.52■■□□□ 1.36
SF1-212ENST00000463343 GNAT3A8MTJ3 354 aa23.51■■□□□ 1.35
SF1-212ENST00000463343 SSFA2P28290 1259 aa23.51■■□□□ 1.35
SF1-212ENST00000463343 NFATC2IPQ8NCF5 419 aa23.51■■□□□ 1.35
SF1-212ENST00000463343 ADAMTS8Q9UP79 889 aa23.51■■□□□ 1.35
SF1-212ENST00000463343 UBR3Q6ZT12 1888 aa23.5■■□□□ 1.35
SF1-212ENST00000463343 LOC102724428A0A0B4J2F2 783 aa23.5■■□□□ 1.35
SF1-212ENST00000463343 SIK1P57059 783 aa23.5■■□□□ 1.35
SF1-212ENST00000463343 IL17REQ8NFR9 667 aa23.5■■□□□ 1.35
SF1-212ENST00000463343 PNNQ9H307 717 aaKnown RBP23.5■■□□□ 1.35
SF1-212ENST00000463343 ASAP1Q9ULH1 1129 aa23.5■■□□□ 1.35
SF1-212ENST00000463343 WDR43Q15061 677 aaKnown RBP eCLIP23.49■■□□□ 1.35
SF1-212ENST00000463343 ATG3Q9NT62 314 aa23.49■■□□□ 1.35
SF1-212ENST00000463343 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.48■■□□□ 1.35
SF1-212ENST00000463343 NEFMP07197 916 aa23.47■■□□□ 1.35
SF1-212ENST00000463343 SLC52A2Q9HAB3 445 aa23.47■■□□□ 1.35
SF1-212ENST00000463343 AMIGO3Q86WK7 504 aa23.46■■□□□ 1.35
SF1-212ENST00000463343 NFE2L2Q16236 605 aa23.44■■□□□ 1.34
SF1-212ENST00000463343 CCDC146Q8IYE0 955 aa23.44■■□□□ 1.34
SF1-212ENST00000463343 LINC00116Q8NCU8 138 aa23.44■■□□□ 1.34
SF1-212ENST00000463343 SCN11AQ9UI33 1791 aa23.44■■□□□ 1.34
SF1-212ENST00000463343 MAPK8IP3Q9UPT6 1336 aa23.43■■□□□ 1.34
SF1-212ENST00000463343 HTATSF1O43719 755 aaKnown RBP23.43■■□□□ 1.34
SF1-212ENST00000463343 MRS2Q9HD23 443 aa23.43■■□□□ 1.34
SF1-212ENST00000463343 PNISRQ8TF01 805 aaKnown RBP23.42■■□□□ 1.34
SF1-212ENST00000463343 RUNDC1Q96C34 613 aa23.42■■□□□ 1.34
SF1-212ENST00000463343 ADAMTS7Q9UKP4 1686 aa23.41■■□□□ 1.34
SF1-212ENST00000463343 PHF14O94880 888 aa23.41■■□□□ 1.34
SF1-212ENST00000463343 ATP6V1AP38606 617 aa23.41■■□□□ 1.34
SF1-212ENST00000463343 ITPK1Q13572 414 aa23.41■■□□□ 1.34
SF1-212ENST00000463343 DCTN1Q14203 1278 aa23.41■■□□□ 1.34
SF1-212ENST00000463343 MCM10Q7L590 875 aa23.41■■□□□ 1.34
SF1-212ENST00000463343 RTF1Q92541 710 aaKnown RBP23.41■■□□□ 1.34
SF1-212ENST00000463343 ATP10DQ9P241 1426 aa23.41■■□□□ 1.34
SF1-212ENST00000463343 ADCY9O60503 1353 aa23.4■■□□□ 1.34
SF1-212ENST00000463343 CEMIPQ8WUJ3 1361 aa23.4■■□□□ 1.34
SF1-212ENST00000463343 TEFQ10587 303 aa23.4■■□□□ 1.34
SF1-212ENST00000463343 TMPOP42166 694 aaKnown RBP23.39■■□□□ 1.33
SF1-212ENST00000463343 SLC39A6Q13433 755 aa23.39■■□□□ 1.33
SF1-212ENST00000463343 SLC4A9Q96Q91 983 aa23.39■■□□□ 1.33
SF1-212ENST00000463343 ZNF831Q5JPB2 1677 aa23.38■■□□□ 1.33
SF1-212ENST00000463343 CEP350Q5VT06 3117 aa23.38■■□□□ 1.33
SF1-212ENST00000463343 MRC1P22897 1456 aa23.38■■□□□ 1.33
SF1-212ENST00000463343 GNPATO15228 680 aa23.38■■□□□ 1.33
SF1-212ENST00000463343 RC3H1Q5TC82 1133 aaKnown RBP23.38■■□□□ 1.33
SF1-212ENST00000463343 RBM42Q9BTD8 480 aaKnown RBP23.38■■□□□ 1.33
SF1-212ENST00000463343 RIPK4P57078 832 aa23.37■■□□□ 1.33
SF1-212ENST00000463343 SMIM5Q71RC9 77 aa23.37■■□□□ 1.33
SF1-212ENST00000463343 GPBP1L1Q9HC44 474 aaPredicted RBP23.37■■□□□ 1.33
SF1-212ENST00000463343 PTCD1O75127 700 aaKnown RBP23.36■■□□□ 1.33
SF1-212ENST00000463343 ADRA2BP18089 450 aa23.36■■□□□ 1.33
SF1-212ENST00000463343 NLGN1Q8N2Q7 840 aa23.36■■□□□ 1.33
SF1-212ENST00000463343 RRP7AQ9Y3A4 280 aaKnown RBP23.36■■□□□ 1.33
SF1-212ENST00000463343 TRAPPC3LQ5T215 181 aa23.35■■□□□ 1.33
SF1-212ENST00000463343 RTCBQ9Y3I0 505 aaKnown RBP23.35■■□□□ 1.33
SF1-212ENST00000463343 VIRMAQ69YN4 1812 aaKnown RBP23.34■■□□□ 1.33
SF1-212ENST00000463343 TGFB2P61812 414 aa23.34■■□□□ 1.33
SF1-212ENST00000463343 NEUROD2Q15784 382 aa23.33■■□□□ 1.33
SF1-212ENST00000463343 THUMPD2Q9BTF0 503 aaKnown RBP23.33■■□□□ 1.33
SF1-212ENST00000463343 BTBD11A6QL63 1104 aa23.32■■□□□ 1.32
SF1-212ENST00000463343 MMP10P09238 476 aa23.32■■□□□ 1.32
SF1-212ENST00000463343 DIEXFQ68CQ4 756 aaKnown RBP23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms