RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 MBIPQ9NS73 344 aa18.7■□□□□ 0.58
COL6A1-202ENST00000463060 TOGARAM1Q9Y4F4 1720 aa18.7■□□□□ 0.58
COL6A1-202ENST00000463060 NFATC2IPQ8NCF5 419 aa18.69■□□□□ 0.58
COL6A1-202ENST00000463060 FANCIQ9NVI1 1328 aa18.69■□□□□ 0.58
COL6A1-202ENST00000463060 TSR2Q969E8 191 aaKnown RBP18.68■□□□□ 0.58
COL6A1-202ENST00000463060 MIS18AQ9NYP9 233 aa18.68■□□□□ 0.58
COL6A1-202ENST00000463060 BRWD3Q6RI45 1802 aa18.67■□□□□ 0.58
COL6A1-202ENST00000463060 A0A0G2JS52 829 aa18.66■□□□□ 0.58
COL6A1-202ENST00000463060 MYT1Q01538 1121 aa18.66■□□□□ 0.58
COL6A1-202ENST00000463060 LAS1LQ9Y4W2 734 aaKnown RBP18.66■□□□□ 0.58
COL6A1-202ENST00000463060 ITGB4P16144 1822 aa18.65■□□□□ 0.58
COL6A1-202ENST00000463060 CABP4P57796 275 aa18.65■□□□□ 0.58
COL6A1-202ENST00000463060 TSPYL4Q9UJ04 414 aa18.65■□□□□ 0.58
COL6A1-202ENST00000463060 KDM3BQ7LBC6 1761 aa18.65■□□□□ 0.58
COL6A1-202ENST00000463060 BTBD11A6QL63 1104 aa18.64■□□□□ 0.57
COL6A1-202ENST00000463060 KCNQ3O43525 872 aa18.64■□□□□ 0.57
COL6A1-202ENST00000463060 KRT27Q7Z3Y8 459 aa18.64■□□□□ 0.57
COL6A1-202ENST00000463060 PIGBQ92521 554 aa18.64■□□□□ 0.57
COL6A1-202ENST00000463060 RGS12O14924 1447 aa18.64■□□□□ 0.57
COL6A1-202ENST00000463060 PRIM1P49642 420 aaKnown RBP18.63■□□□□ 0.57
COL6A1-202ENST00000463060 EXOSC9Q06265 439 aaKnown RBP18.63■□□□□ 0.57
COL6A1-202ENST00000463060 HEG1Q9ULI3 1381 aa18.63■□□□□ 0.57
COL6A1-202ENST00000463060 CENPBP07199 599 aaPredicted RBP18.62■□□□□ 0.57
COL6A1-202ENST00000463060 FAM182BQ5T319 152 aa18.62■□□□□ 0.57
COL6A1-202ENST00000463060 ZNF790Q6PG37 636 aa18.62■□□□□ 0.57
COL6A1-202ENST00000463060 C8orf58Q8NAV2 365 aa18.62■□□□□ 0.57
COL6A1-202ENST00000463060 DOT1LQ8TEK3 1739 aa18.62■□□□□ 0.57
COL6A1-202ENST00000463060 EIF4A1P60842 406 aaKnown RBP18.61■□□□□ 0.57
COL6A1-202ENST00000463060 TMOD3Q9NYL9 352 aa18.61■□□□□ 0.57
COL6A1-202ENST00000463060 PAPPAQ13219 1627 aa18.6■□□□□ 0.57
COL6A1-202ENST00000463060 KCNQ2O43526 872 aa18.6■□□□□ 0.57
COL6A1-202ENST00000463060 SLC39A6Q13433 755 aa18.6■□□□□ 0.57
COL6A1-202ENST00000463060 TSPYL6Q8N831 410 aa18.6■□□□□ 0.57
COL6A1-202ENST00000463060 SBF2Q86WG5 1849 aa18.59■□□□□ 0.57
COL6A1-202ENST00000463060 VAMP4O75379 141 aa18.59■□□□□ 0.57
COL6A1-202ENST00000463060 CT47B1P0C2W7 299 aaPredicted RBP18.59■□□□□ 0.57
COL6A1-202ENST00000463060 KRT24Q2M2I5 525 aa18.59■□□□□ 0.57
COL6A1-202ENST00000463060 ACSBG1Q96GR2 724 aa18.59■□□□□ 0.57
COL6A1-202ENST00000463060 ATG3Q9NT62 314 aa18.59■□□□□ 0.57
COL6A1-202ENST00000463060 FAM196AQ6ZSG2 479 aa18.58■□□□□ 0.56
COL6A1-202ENST00000463060 ASAP1Q9ULH1 1129 aa18.58■□□□□ 0.56
COL6A1-202ENST00000463060 UBR2Q8IWV8 1755 aa18.58■□□□□ 0.56
COL6A1-202ENST00000463060 PTF1AQ7RTS3 328 aa18.57■□□□□ 0.56
COL6A1-202ENST00000463060 KAT6BQ8WYB5 2073 aa18.56■□□□□ 0.56
COL6A1-202ENST00000463060 SOS1Q07889 1333 aaPredicted RBP18.56■□□□□ 0.56
COL6A1-202ENST00000463060 KCPQ6ZWJ8 1503 aa18.56■□□□□ 0.56
COL6A1-202ENST00000463060 TWISTNBQ3B726 338 aaPredicted RBP18.56■□□□□ 0.56
COL6A1-202ENST00000463060 ZNF496Q96IT1 587 aaPredicted RBP18.56■□□□□ 0.56
COL6A1-202ENST00000463060 NHSQ6T4R5 1651 aa18.56■□□□□ 0.56
COL6A1-202ENST00000463060 GIGYF1O75420 1035 aaPredicted RBP18.55■□□□□ 0.56
COL6A1-202ENST00000463060 ELL2O00472 640 aaPredicted RBP18.54■□□□□ 0.56
COL6A1-202ENST00000463060 HOXB7P09629 217 aa18.54■□□□□ 0.56
COL6A1-202ENST00000463060 ZNF428Q96B54 188 aa18.54■□□□□ 0.56
COL6A1-202ENST00000463060 SYTL4Q96C24 671 aaPredicted RBP18.54■□□□□ 0.56
COL6A1-202ENST00000463060 RARSP54136 660 aaKnown RBP18.53■□□□□ 0.56
COL6A1-202ENST00000463060 FMNL2Q96PY5 1086 aa18.53■□□□□ 0.56
COL6A1-202ENST00000463060 BCL11BQ9C0K0 894 aaPredicted RBP18.53■□□□□ 0.56
COL6A1-202ENST00000463060 RCAN3Q9UKA8 241 aa18.53■□□□□ 0.56
COL6A1-202ENST00000463060 TTC5Q8N0Z6 440 aa18.52■□□□□ 0.56
COL6A1-202ENST00000463060 SLC4A9Q96Q91 983 aa18.52■□□□□ 0.56
COL6A1-202ENST00000463060 VSIG10Q8N0Z9 540 aa18.51■□□□□ 0.55
COL6A1-202ENST00000463060 PRAMEF22A3QJZ6 481 aa18.5■□□□□ 0.55
COL6A1-202ENST00000463060 PTCD1O75127 700 aaKnown RBP18.5■□□□□ 0.55
COL6A1-202ENST00000463060 SNRPA1P09661 255 aaKnown RBP18.5■□□□□ 0.55
COL6A1-202ENST00000463060 ALDH1L2Q3SY69 923 aa18.5■□□□□ 0.55
COL6A1-202ENST00000463060 SMARCC1Q92922 1105 aaPredicted RBP18.5■□□□□ 0.55
COL6A1-202ENST00000463060 BTAF1O14981 1849 aa18.5■□□□□ 0.55
COL6A1-202ENST00000463060 RNF123Q5XPI4 1314 aa18.49■□□□□ 0.55
COL6A1-202ENST00000463060 BRPF1P55201 1214 aaPredicted RBP18.49■□□□□ 0.55
COL6A1-202ENST00000463060 SSH1Q8WYL5 1049 aa18.49■□□□□ 0.55
COL6A1-202ENST00000463060 USP16Q9Y5T5 823 aa18.48■□□□□ 0.55
COL6A1-202ENST00000463060 EP400Q96L91 3159 aa18.48■□□□□ 0.55
COL6A1-202ENST00000463060 C5P01031 1676 aa18.47■□□□□ 0.55
COL6A1-202ENST00000463060 PALLDQ8WX93 1383 aa18.47■□□□□ 0.55
COL6A1-202ENST00000463060 BCAR3O75815 825 aa18.47■□□□□ 0.55
COL6A1-202ENST00000463060 TRIM37O94972 964 aa18.47■□□□□ 0.55
COL6A1-202ENST00000463060 ZNF831Q5JPB2 1677 aa18.47■□□□□ 0.55
COL6A1-202ENST00000463060 CICQ96RK0 1608 aaPredicted RBP18.46■□□□□ 0.55
COL6A1-202ENST00000463060 MRPL50Q8N5N7 158 aaKnown RBP18.46■□□□□ 0.55
COL6A1-202ENST00000463060 LOC102724428A0A0B4J2F2 783 aa18.45■□□□□ 0.54
COL6A1-202ENST00000463060 SIK1P57059 783 aa18.45■□□□□ 0.54
COL6A1-202ENST00000463060 PDIA6Q15084 440 aa18.45■□□□□ 0.54
COL6A1-202ENST00000463060 HDGFL1Q5TGJ6 251 aa18.45■□□□□ 0.54
COL6A1-202ENST00000463060 CCDC30Q5VVM6 783 aa18.45■□□□□ 0.54
COL6A1-202ENST00000463060 RBM42Q9BTD8 480 aaKnown RBP18.45■□□□□ 0.54
COL6A1-202ENST00000463060 TEX13AQ9BXU3 409 aaPredicted RBP18.45■□□□□ 0.54
COL6A1-202ENST00000463060 CHMP4AQ9BY43 222 aa18.45■□□□□ 0.54
COL6A1-202ENST00000463060 SUPT16HQ9Y5B9 1047 aaKnown RBP18.44■□□□□ 0.54
COL6A1-202ENST00000463060 LY75O60449 1722 aa18.43■□□□□ 0.54
COL6A1-202ENST00000463060 TCERG1O14776 1098 aaKnown RBP18.43■□□□□ 0.54
COL6A1-202ENST00000463060 EIF2S2P20042 333 aaKnown RBP18.43■□□□□ 0.54
COL6A1-202ENST00000463060 DNAJC10Q8IXB1 793 aa18.43■□□□□ 0.54
COL6A1-202ENST00000463060 BCL2L13Q9BXK5 485 aa18.43■□□□□ 0.54
COL6A1-202ENST00000463060 TJP1Q07157 1748 aa18.43■□□□□ 0.54
COL6A1-202ENST00000463060 LAMB4A4D0S4 1761 aa18.42■□□□□ 0.54
COL6A1-202ENST00000463060 PLSCR1O15162 318 aa18.42■□□□□ 0.54
COL6A1-202ENST00000463060 CYP19A1P11511 503 aaPredicted RBP18.42■□□□□ 0.54
COL6A1-202ENST00000463060 ITPK1Q13572 414 aa18.42■□□□□ 0.54
COL6A1-202ENST00000463060 LRP10Q7Z4F1 713 aa18.42■□□□□ 0.54
COL6A1-202ENST00000463060 SMC4Q9NTJ3 1288 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms