RNA–Protein interactions for RNA: ENST00000462625.1

LIMK2-206, Transcript of LIM domain kinase 2, humanhuman

TSL 2

Gene LIMK2, Length 1,042 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-206ENST00000462625 RSPH6AQ9H0K4 717 aa30.93■■■□□ 2.54
LIMK2-206ENST00000462625 RNMTO43148 476 aaKnown RBP30.91■■■□□ 2.54
LIMK2-206ENST00000462625 ZBTB7AO95365 584 aa30.91■■■□□ 2.54
LIMK2-206ENST00000462625 PPP1R1BQ9UD71 204 aaPredicted RBP30.91■■■□□ 2.54
LIMK2-206ENST00000462625 ATP6V1AP38606 617 aa30.9■■■□□ 2.54
LIMK2-206ENST00000462625 MTFR1LQ9H019 292 aa30.9■■■□□ 2.54
LIMK2-206ENST00000462625 SLC52A2Q9HAB3 445 aa30.89■■■□□ 2.54
LIMK2-206ENST00000462625 LGR6Q9HBX8 967 aa30.89■■■□□ 2.54
LIMK2-206ENST00000462625 C4BP0C0L5 1744 aa30.89■■■□□ 2.54
LIMK2-206ENST00000462625 GNAT3A8MTJ3 354 aa30.88■■■□□ 2.53
LIMK2-206ENST00000462625 NEFMP07197 916 aa30.88■■■□□ 2.53
LIMK2-206ENST00000462625 SLC16A10Q8TF71 515 aa30.88■■■□□ 2.53
LIMK2-206ENST00000462625 RBM42Q9BTD8 480 aaKnown RBP30.88■■■□□ 2.53
LIMK2-206ENST00000462625 MAP3K5Q99683 1374 aa30.88■■■□□ 2.53
LIMK2-206ENST00000462625 ZNF831Q5JPB2 1677 aa30.87■■■□□ 2.53
LIMK2-206ENST00000462625 AK7Q96M32 723 aa30.87■■■□□ 2.53
LIMK2-206ENST00000462625 ATF5Q9Y2D1 282 aaPredicted RBP30.87■■■□□ 2.53
LIMK2-206ENST00000462625 PNPLA7Q6ZV29 1317 aa30.87■■■□□ 2.53
LIMK2-206ENST00000462625 MYBBP1AQ9BQG0 1328 aaKnown RBP30.87■■■□□ 2.53
LIMK2-206ENST00000462625 ADAMTS7Q9UKP4 1686 aa30.87■■■□□ 2.53
LIMK2-206ENST00000462625 FLAD1Q8NFF5 587 aa30.86■■■□□ 2.53
LIMK2-206ENST00000462625 PHACTR3Q96KR7 559 aa30.85■■■□□ 2.53
LIMK2-206ENST00000462625 PNNQ9H307 717 aaKnown RBP30.85■■■□□ 2.53
LIMK2-206ENST00000462625 MSH5O43196 834 aa30.84■■■□□ 2.53
LIMK2-206ENST00000462625 MRC1P22897 1456 aa30.83■■■□□ 2.53
LIMK2-206ENST00000462625 ZNF316A6NFI3 1004 aaPredicted RBP30.83■■■□□ 2.53
LIMK2-206ENST00000462625 UBR3Q6ZT12 1888 aa30.81■■■□□ 2.52
LIMK2-206ENST00000462625 PTCD1O75127 700 aaKnown RBP30.81■■■□□ 2.52
LIMK2-206ENST00000462625 TEFQ10587 303 aa30.81■■■□□ 2.52
LIMK2-206ENST00000462625 ITPK1Q13572 414 aa30.81■■■□□ 2.52
LIMK2-206ENST00000462625 LINC00116Q8NCU8 138 aa30.81■■■□□ 2.52
LIMK2-206ENST00000462625 COL23A1Q86Y22 540 aaPredicted RBP30.78■■■□□ 2.52
LIMK2-206ENST00000462625 RTF1Q92541 710 aaKnown RBP30.78■■■□□ 2.52
LIMK2-206ENST00000462625 COL5A3P25940 1745 aaPredicted RBP30.77■■■□□ 2.52
LIMK2-206ENST00000462625 PTGER2P43116 358 aa30.77■■■□□ 2.52
LIMK2-206ENST00000462625 PRKRIP1Q9H875 184 aaPredicted RBP30.77■■■□□ 2.52
LIMK2-206ENST00000462625 POLD1P28340 1107 aa30.76■■■□□ 2.51
LIMK2-206ENST00000462625 IL17REQ8NFR9 667 aa30.76■■■□□ 2.51
LIMK2-206ENST00000462625 SLC4A9Q96Q91 983 aa30.76■■■□□ 2.51
LIMK2-206ENST00000462625 SSFA2P28290 1259 aa30.75■■■□□ 2.51
LIMK2-206ENST00000462625 SIPA1L3O60292 1781 aaPredicted RBP30.74■■■□□ 2.51
LIMK2-206ENST00000462625 GNPATO15228 680 aa30.74■■■□□ 2.51
LIMK2-206ENST00000462625 HTATSF1O43719 755 aaKnown RBP30.73■■■□□ 2.51
LIMK2-206ENST00000462625 PHF14O94880 888 aa30.73■■■□□ 2.51
LIMK2-206ENST00000462625 RC3H1Q5TC82 1133 aaKnown RBP30.73■■■□□ 2.51
LIMK2-206ENST00000462625 TTC5Q8N0Z6 440 aa30.73■■■□□ 2.51
LIMK2-206ENST00000462625 COL24A1Q17RW2 1714 aa30.73■■■□□ 2.51
LIMK2-206ENST00000462625 MAPK8IP3Q9UPT6 1336 aa30.73■■■□□ 2.51
LIMK2-206ENST00000462625 SLC39A6Q13433 755 aa30.72■■■□□ 2.51
LIMK2-206ENST00000462625 SGIP1Q9BQI5 828 aa30.72■■■□□ 2.51
LIMK2-206ENST00000462625 DLG5Q8TDM6 1919 aa30.71■■■□□ 2.51
LIMK2-206ENST00000462625 CEMIPQ8WUJ3 1361 aa30.71■■■□□ 2.51
LIMK2-206ENST00000462625 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP30.71■■■□□ 2.51
LIMK2-206ENST00000462625 RTCBQ9Y3I0 505 aaKnown RBP30.71■■■□□ 2.51
LIMK2-206ENST00000462625 CICQ96RK0 1608 aaPredicted RBP30.71■■■□□ 2.51
LIMK2-206ENST00000462625 ARXQ96QS3 562 aa30.7■■■□□ 2.51
LIMK2-206ENST00000462625 CNTNAP4Q9C0A0 1308 aa30.7■■■□□ 2.5
LIMK2-206ENST00000462625 PLEKHF1Q96S99 279 aa30.69■■■□□ 2.5
LIMK2-206ENST00000462625 TJP1Q07157 1748 aa30.69■■■□□ 2.5
LIMK2-206ENST00000462625 UBR2Q8IWV8 1755 aa30.69■■■□□ 2.5
LIMK2-206ENST00000462625 MYH14Q7Z406 1995 aaKnown RBP30.68■■■□□ 2.5
LIMK2-206ENST00000462625 WDR43Q15061 677 aaKnown RBP eCLIP30.68■■■□□ 2.5
LIMK2-206ENST00000462625 TRAPPC3LQ5T215 181 aa30.66■■■□□ 2.5
LIMK2-206ENST00000462625 VSIG10Q8N0Z9 540 aa30.66■■■□□ 2.5
LIMK2-206ENST00000462625 KCPQ6ZWJ8 1503 aa30.66■■■□□ 2.5
LIMK2-206ENST00000462625 RPS6KA4O75676 772 aa30.65■■■□□ 2.5
LIMK2-206ENST00000462625 ADRA2BP18089 450 aa30.65■■■□□ 2.5
LIMK2-206ENST00000462625 NFE2L2Q16236 605 aa30.65■■■□□ 2.5
LIMK2-206ENST00000462625 ZNF790Q6PG37 636 aa30.65■■■□□ 2.5
LIMK2-206ENST00000462625 MCM10Q7L590 875 aa30.65■■■□□ 2.5
LIMK2-206ENST00000462625 AMIGO3Q86WK7 504 aa30.65■■■□□ 2.5
LIMK2-206ENST00000462625 BTBD11A6QL63 1104 aa30.64■■■□□ 2.5
LIMK2-206ENST00000462625 CRKLP46109 303 aaKnown RBP30.64■■■□□ 2.5
LIMK2-206ENST00000462625 SMIM5Q71RC9 77 aa30.63■■■□□ 2.49
LIMK2-206ENST00000462625 DNAJC10Q8IXB1 793 aa30.63■■■□□ 2.49
LIMK2-206ENST00000462625 MSL1Q68DK7 614 aa30.62■■■□□ 2.49
LIMK2-206ENST00000462625 DCAF8L1A6NGE4 600 aa30.61■■■□□ 2.49
LIMK2-206ENST00000462625 FHDC1Q9C0D6 1143 aaPredicted RBP30.61■■■□□ 2.49
LIMK2-206ENST00000462625 DCTN1Q14203 1278 aa30.6■■■□□ 2.49
LIMK2-206ENST00000462625 FMNL2Q96PY5 1086 aa30.6■■■□□ 2.49
LIMK2-206ENST00000462625 RFC4P35249 363 aa30.59■■■□□ 2.49
LIMK2-206ENST00000462625 TEX13AQ9BXU3 409 aaPredicted RBP30.59■■■□□ 2.49
LIMK2-206ENST00000462625 CCDC87Q9NVE4 849 aa30.59■■■□□ 2.49
LIMK2-206ENST00000462625 STARD3NLO95772 234 aa30.58■■■□□ 2.49
LIMK2-206ENST00000462625 CYP19A1P11511 503 aaPredicted RBP30.58■■■□□ 2.49
LIMK2-206ENST00000462625 ZNF496Q96IT1 587 aaPredicted RBP30.58■■■□□ 2.49
LIMK2-206ENST00000462625 SYT17Q9BSW7 474 aa30.58■■■□□ 2.49
LIMK2-206ENST00000462625 HEG1Q9ULI3 1381 aa30.57■■■□□ 2.48
LIMK2-206ENST00000462625 TAF7Q15545 349 aaPredicted RBP30.57■■■□□ 2.48
LIMK2-206ENST00000462625 ARHGEF1Q92888 912 aaKnown RBP30.57■■■□□ 2.48
LIMK2-206ENST00000462625 INTS5Q6P9B9 1019 aaKnown RBP30.56■■■□□ 2.48
LIMK2-206ENST00000462625 KLHL34Q8N239 644 aa30.56■■■□□ 2.48
LIMK2-206ENST00000462625 ANP32CO43423 234 aa30.55■■■□□ 2.48
LIMK2-206ENST00000462625 C4AP0C0L4 1744 aa30.54■■■□□ 2.48
LIMK2-206ENST00000462625 PNISRQ8TF01 805 aaKnown RBP30.54■■■□□ 2.48
LIMK2-206ENST00000462625 RIPK4P57078 832 aa30.53■■■□□ 2.48
LIMK2-206ENST00000462625 LMOD3Q0VAK6 560 aa30.53■■■□□ 2.48
LIMK2-206ENST00000462625 NLGN1Q8N2Q7 840 aa30.53■■■□□ 2.48
LIMK2-206ENST00000462625 RUNDC1Q96C34 613 aa30.53■■■□□ 2.48
LIMK2-206ENST00000462625 ADAMTS8Q9UP79 889 aa30.53■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms