RNA–Protein interactions for RNA: ENST00000462613.1

SF3B1-206, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 3

Gene SF3B1, Length 141 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-206ENST00000462613 EN1Q05925 392 aaPredicted RBP8.36□□□□□ -1.07
SF3B1-206ENST00000462613 CCDC184Q52MB2 194 aa8.36□□□□□ -1.07
SF3B1-206ENST00000462613 NGEFQ8N5V2 710 aa8.36□□□□□ -1.07
SF3B1-206ENST00000462613 NFATC2IPQ8NCF5 419 aa8.36□□□□□ -1.07
SF3B1-206ENST00000462613 MRC1P22897 1456 aa8.36□□□□□ -1.07
SF3B1-206ENST00000462613 C5P01031 1676 aa8.36□□□□□ -1.07
SF3B1-206ENST00000462613 ZNF831Q5JPB2 1677 aa8.36□□□□□ -1.07
SF3B1-206ENST00000462613 PALLDQ8WX93 1383 aa8.35□□□□□ -1.07
SF3B1-206ENST00000462613 APAF1O14727 1248 aa8.35□□□□□ -1.07
SF3B1-206ENST00000462613 SLC27A3Q5K4L6 730 aa8.35□□□□□ -1.07
SF3B1-206ENST00000462613 NBPF14Q5TI25 921 aa8.35□□□□□ -1.07
SF3B1-206ENST00000462613 DEFB132Q7Z7B7 95 aa8.35□□□□□ -1.07
SF3B1-206ENST00000462613 MIER1Q8N108 512 aa8.35□□□□□ -1.07
SF3B1-206ENST00000462613 LGR6Q9HBX8 967 aa8.35□□□□□ -1.07
SF3B1-206ENST00000462613 PAPPAQ13219 1627 aa8.35□□□□□ -1.07
SF3B1-206ENST00000462613 UBR2Q8IWV8 1755 aa8.35□□□□□ -1.07
SF3B1-206ENST00000462613 BTBD11A6QL63 1104 aa8.34□□□□□ -1.07
SF3B1-206ENST00000462613 EZH2Q15910 746 aaKnown RBP8.34□□□□□ -1.07
SF3B1-206ENST00000462613 TXNRD1Q16881 649 aa8.34□□□□□ -1.07
SF3B1-206ENST00000462613 MCM10Q7L590 875 aa8.34□□□□□ -1.07
SF3B1-206ENST00000462613 PIGBQ92521 554 aa8.34□□□□□ -1.07
SF3B1-206ENST00000462613 CCNL1Q9UK58 526 aaPredicted RBP8.34□□□□□ -1.07
SF3B1-206ENST00000462613 RRP7AQ9Y3A4 280 aaKnown RBP8.34□□□□□ -1.07
SF3B1-206ENST00000462613 KDM3BQ7LBC6 1761 aa8.34□□□□□ -1.07
SF3B1-206ENST00000462613 CEMIPQ8WUJ3 1361 aa8.34□□□□□ -1.07
SF3B1-206ENST00000462613 TAF7Q15545 349 aaPredicted RBP8.33□□□□□ -1.08
SF3B1-206ENST00000462613 QSER1Q2KHR3 1735 aa8.33□□□□□ -1.08
SF3B1-206ENST00000462613 NCBP3Q53F19 620 aaKnown RBP8.33□□□□□ -1.08
SF3B1-206ENST00000462613 IL17REQ8NFR9 667 aa8.33□□□□□ -1.08
SF3B1-206ENST00000462613 CAMKK2Q96RR4 588 aa8.33□□□□□ -1.08
SF3B1-206ENST00000462613 RBM42Q9BTD8 480 aaKnown RBP8.33□□□□□ -1.08
SF3B1-206ENST00000462613 LAMB4A4D0S4 1761 aa8.33□□□□□ -1.08
SF3B1-206ENST00000462613 COL5A3P25940 1745 aaPredicted RBP8.32□□□□□ -1.08
SF3B1-206ENST00000462613 CACNA1FO60840 1977 aa8.32□□□□□ -1.08
SF3B1-206ENST00000462613 LOC102724428A0A0B4J2F2 783 aa8.32□□□□□ -1.08
SF3B1-206ENST00000462613 ATP6V1AP38606 617 aa8.32□□□□□ -1.08
SF3B1-206ENST00000462613 SIK1P57059 783 aa8.32□□□□□ -1.08
SF3B1-206ENST00000462613 DCTN1Q14203 1278 aa8.32□□□□□ -1.08
SF3B1-206ENST00000462613 ZNF790Q6PG37 636 aa8.32□□□□□ -1.08
SF3B1-206ENST00000462613 PTF1AQ7RTS3 328 aa8.32□□□□□ -1.08
SF3B1-206ENST00000462613 NPM2Q86SE8 214 aaKnown RBP8.32□□□□□ -1.08
SF3B1-206ENST00000462613 FMNL2Q96PY5 1086 aa8.32□□□□□ -1.08
SF3B1-206ENST00000462613 TEX13AQ9BXU3 409 aaPredicted RBP8.32□□□□□ -1.08
SF3B1-206ENST00000462613 ATG3Q9NT62 314 aa8.32□□□□□ -1.08
SF3B1-206ENST00000462613 BABAM1Q9NWV8 329 aa8.32□□□□□ -1.08
SF3B1-206ENST00000462613 STK32BQ9NY57 414 aa8.32□□□□□ -1.08
SF3B1-206ENST00000462613 ASAP1Q9ULH1 1129 aa8.32□□□□□ -1.08
SF3B1-206ENST00000462613 CICQ96RK0 1608 aaPredicted RBP8.32□□□□□ -1.08
SF3B1-206ENST00000462613 C4BP0C0L5 1744 aa8.32□□□□□ -1.08
SF3B1-206ENST00000462613 PTCD1O75127 700 aaKnown RBP8.31□□□□□ -1.08
SF3B1-206ENST00000462613 GNAI1P63096 354 aa8.31□□□□□ -1.08
SF3B1-206ENST00000462613 CCDC27Q2M243 656 aa8.31□□□□□ -1.08
SF3B1-206ENST00000462613 TSPYL4Q9UJ04 414 aa8.31□□□□□ -1.08
SF3B1-206ENST00000462613 LAS1LQ9Y4W2 734 aaKnown RBP8.31□□□□□ -1.08
SF3B1-206ENST00000462613 UBR3Q6ZT12 1888 aa8.3□□□□□ -1.08
SF3B1-206ENST00000462613 TJP1Q07157 1748 aa8.3□□□□□ -1.08
SF3B1-206ENST00000462613 SLC39A6Q13433 755 aa8.3□□□□□ -1.08
SF3B1-206ENST00000462613 VSIG10Q8N0Z9 540 aa8.3□□□□□ -1.08
SF3B1-206ENST00000462613 AK7Q96M32 723 aa8.3□□□□□ -1.08
SF3B1-206ENST00000462613 THUMPD2Q9BTF0 503 aaKnown RBP8.3□□□□□ -1.08
SF3B1-206ENST00000462613 CHMP4AQ9BY43 222 aa8.3□□□□□ -1.08
SF3B1-206ENST00000462613 TUBGCP6Q96RT7 1819 aa8.29□□□□□ -1.08
SF3B1-206ENST00000462613 STARD3NLO95772 234 aa8.29□□□□□ -1.08
SF3B1-206ENST00000462613 FLAD1Q8NFF5 587 aa8.29□□□□□ -1.08
SF3B1-206ENST00000462613 CFAP44Q96MT7 982 aa8.29□□□□□ -1.08
SF3B1-206ENST00000462613 TFCP2L1Q9NZI6 479 aa8.29□□□□□ -1.08
SF3B1-206ENST00000462613 TRIM35Q9UPQ4 493 aa8.29□□□□□ -1.08
SF3B1-206ENST00000462613 SALL2Q9Y467 1007 aaPredicted RBP8.29□□□□□ -1.08
SF3B1-206ENST00000462613 HEG1Q9ULI3 1381 aa8.29□□□□□ -1.08
SF3B1-206ENST00000462613 MYH14Q7Z406 1995 aaKnown RBP8.29□□□□□ -1.08
SF3B1-206ENST00000462613 KCPQ6ZWJ8 1503 aa8.29□□□□□ -1.08
SF3B1-206ENST00000462613 SNRPA1P09661 255 aaKnown RBP8.28□□□□□ -1.08
SF3B1-206ENST00000462613 WDR63Q8IWG1 891 aa8.28□□□□□ -1.08
SF3B1-206ENST00000462613 WWC1Q8IX03 1113 aa8.28□□□□□ -1.08
SF3B1-206ENST00000462613 IFT57Q9NWB7 429 aa8.28□□□□□ -1.08
SF3B1-206ENST00000462613 IL16Q14005 1332 aa8.28□□□□□ -1.08
SF3B1-206ENST00000462613 MSH5O43196 834 aa8.27□□□□□ -1.09
SF3B1-206ENST00000462613 SLC15A2Q16348 729 aa8.27□□□□□ -1.09
SF3B1-206ENST00000462613 PROM2Q8N271 834 aa8.27□□□□□ -1.09
SF3B1-206ENST00000462613 ZNF496Q96IT1 587 aaPredicted RBP8.27□□□□□ -1.09
SF3B1-206ENST00000462613 MYH16Q9H6N6 1097 aa8.27□□□□□ -1.09
SF3B1-206ENST00000462613 LRRC4BQ9NT99 713 aa8.27□□□□□ -1.09
SF3B1-206ENST00000462613 RTCBQ9Y3I0 505 aaKnown RBP8.27□□□□□ -1.09
SF3B1-206ENST00000462613 CNTNAP4Q9C0A0 1308 aa8.27□□□□□ -1.09
SF3B1-206ENST00000462613 CHL1O00533 1208 aa8.26□□□□□ -1.09
SF3B1-206ENST00000462613 GNPATO15228 680 aa8.26□□□□□ -1.09
SF3B1-206ENST00000462613 KCNQ4P56696 695 aa8.26□□□□□ -1.09
SF3B1-206ENST00000462613 HNRNPUQ00839 825 aaKnown RBP eCLIP8.26□□□□□ -1.09
SF3B1-206ENST00000462613 GOLGA2Q08379 1002 aa8.26□□□□□ -1.09
SF3B1-206ENST00000462613 RC3H1Q5TC82 1133 aaKnown RBP8.26□□□□□ -1.09
SF3B1-206ENST00000462613 DNAJC10Q8IXB1 793 aa8.26□□□□□ -1.09
SF3B1-206ENST00000462613 CCDC87Q9NVE4 849 aa8.26□□□□□ -1.09
SF3B1-206ENST00000462613 MIS18AQ9NYP9 233 aa8.26□□□□□ -1.09
SF3B1-206ENST00000462613 SOS1Q07889 1333 aaPredicted RBP8.26□□□□□ -1.09
SF3B1-206ENST00000462613 C4AP0C0L4 1744 aa8.26□□□□□ -1.09
SF3B1-206ENST00000462613 SENP3-EIF4A1A0A087X0R7 540 aa8.25□□□□□ -1.09
SF3B1-206ENST00000462613 HOXB7P09629 217 aa8.25□□□□□ -1.09
SF3B1-206ENST00000462613 ADRA2BP18089 450 aa8.25□□□□□ -1.09
SF3B1-206ENST00000462613 SSFA2P28290 1259 aa8.25□□□□□ -1.09
SF3B1-206ENST00000462613 CRKLP46109 303 aaKnown RBP8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms