RNA–Protein interactions for RNA: ENST00000462488.1

PGBD2-203, Transcript of piggyBac transposable element derived 2, humanhuman

TSL 5

Gene PGBD2, Length 282 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD2-203ENST00000462488 ATG3Q9NT62 314 aa11.11□□□□□ -0.63
PGBD2-203ENST00000462488 ZNF316A6NFI3 1004 aaPredicted RBP11.1□□□□□ -0.63
PGBD2-203ENST00000462488 PHF14O94880 888 aa11.1□□□□□ -0.63
PGBD2-203ENST00000462488 TEFQ10587 303 aa11.1□□□□□ -0.63
PGBD2-203ENST00000462488 KLHL34Q8N239 644 aa11.1□□□□□ -0.63
PGBD2-203ENST00000462488 AKT1S1Q96B36 256 aa11.1□□□□□ -0.63
PGBD2-203ENST00000462488 LGR6Q9HBX8 967 aa11.1□□□□□ -0.63
PGBD2-203ENST00000462488 LY75O60449 1722 aa11.09□□□□□ -0.63
PGBD2-203ENST00000462488 COL3A1P02461 1466 aaPredicted RBP11.09□□□□□ -0.63
PGBD2-203ENST00000462488 DCAF8L1A6NGE4 600 aa11.09□□□□□ -0.63
PGBD2-203ENST00000462488 GNAT3A8MTJ3 354 aa11.09□□□□□ -0.63
PGBD2-203ENST00000462488 RNMTO43148 476 aaKnown RBP11.09□□□□□ -0.63
PGBD2-203ENST00000462488 FCHSD2O94868 740 aa11.09□□□□□ -0.63
PGBD2-203ENST00000462488 POLD1P28340 1107 aa11.09□□□□□ -0.63
PGBD2-203ENST00000462488 CNKSR2Q8WXI2 1034 aa11.09□□□□□ -0.63
PGBD2-203ENST00000462488 MTFR1LQ9H019 292 aa11.09□□□□□ -0.63
PGBD2-203ENST00000462488 PNNQ9H307 717 aaKnown RBP11.09□□□□□ -0.63
PGBD2-203ENST00000462488 KDM6AO15550 1401 aaPredicted RBP11.09□□□□□ -0.63
PGBD2-203ENST00000462488 TTC5Q8N0Z6 440 aa11.08□□□□□ -0.64
PGBD2-203ENST00000462488 FLAD1Q8NFF5 587 aa11.08□□□□□ -0.64
PGBD2-203ENST00000462488 RSPH6AQ9H0K4 717 aa11.08□□□□□ -0.64
PGBD2-203ENST00000462488 SLC52A2Q9HAB3 445 aa11.08□□□□□ -0.64
PGBD2-203ENST00000462488 MYBBP1AQ9BQG0 1328 aaKnown RBP11.08□□□□□ -0.64
PGBD2-203ENST00000462488 MAPK8IP3Q9UPT6 1336 aa11.08□□□□□ -0.64
PGBD2-203ENST00000462488 MAP3K5Q99683 1374 aa11.07□□□□□ -0.64
PGBD2-203ENST00000462488 LRP5O75197 1615 aa11.07□□□□□ -0.64
PGBD2-203ENST00000462488 GNPATO15228 680 aa11.07□□□□□ -0.64
PGBD2-203ENST00000462488 WDR43Q15061 677 aaKnown RBP eCLIP11.07□□□□□ -0.64
PGBD2-203ENST00000462488 PHACTR3Q96KR7 559 aa11.07□□□□□ -0.64
PGBD2-203ENST00000462488 C5P01031 1676 aa11.07□□□□□ -0.64
PGBD2-203ENST00000462488 PNPLA7Q6ZV29 1317 aa11.07□□□□□ -0.64
PGBD2-203ENST00000462488 SCN11AQ9UI33 1791 aa11.06□□□□□ -0.64
PGBD2-203ENST00000462488 SLC39A6Q13433 755 aa11.06□□□□□ -0.64
PGBD2-203ENST00000462488 MSL1Q68DK7 614 aa11.06□□□□□ -0.64
PGBD2-203ENST00000462488 LINC00116Q8NCU8 138 aa11.06□□□□□ -0.64
PGBD2-203ENST00000462488 SLC16A10Q8TF71 515 aa11.06□□□□□ -0.64
PGBD2-203ENST00000462488 VIRMAQ69YN4 1812 aaKnown RBP11.05□□□□□ -0.64
PGBD2-203ENST00000462488 MAPK8IP2Q13387 824 aaPredicted RBP11.05□□□□□ -0.64
PGBD2-203ENST00000462488 ITPK1Q13572 414 aa11.05□□□□□ -0.64
PGBD2-203ENST00000462488 COL23A1Q86Y22 540 aaPredicted RBP11.05□□□□□ -0.64
PGBD2-203ENST00000462488 RTCBQ9Y3I0 505 aaKnown RBP11.05□□□□□ -0.64
PGBD2-203ENST00000462488 PAPPAQ13219 1627 aa11.05□□□□□ -0.64
PGBD2-203ENST00000462488 TAF1LQ8IZX4 1826 aa11.05□□□□□ -0.64
PGBD2-203ENST00000462488 CASZ1Q86V15 1759 aa11.04□□□□□ -0.64
PGBD2-203ENST00000462488 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.04□□□□□ -0.64
PGBD2-203ENST00000462488 BTBD11A6QL63 1104 aa11.04□□□□□ -0.64
PGBD2-203ENST00000462488 TRAPPC3LQ5T215 181 aa11.04□□□□□ -0.64
PGBD2-203ENST00000462488 SMIM5Q71RC9 77 aa11.04□□□□□ -0.64
PGBD2-203ENST00000462488 MCM10Q7L590 875 aa11.04□□□□□ -0.64
PGBD2-203ENST00000462488 IL17REQ8NFR9 667 aa11.04□□□□□ -0.64
PGBD2-203ENST00000462488 ARXQ96QS3 562 aa11.04□□□□□ -0.64
PGBD2-203ENST00000462488 SRCAPQ6ZRS2 3230 aa11.04□□□□□ -0.64
PGBD2-203ENST00000462488 C4BP0C0L5 1744 aa11.04□□□□□ -0.64
PGBD2-203ENST00000462488 NPM2Q86SE8 214 aaKnown RBP11.03□□□□□ -0.64
PGBD2-203ENST00000462488 PRKRIP1Q9H875 184 aaPredicted RBP11.03□□□□□ -0.64
PGBD2-203ENST00000462488 TUBGCP6Q96RT7 1819 aa11.02□□□□□ -0.64
PGBD2-203ENST00000462488 ANP32CO43423 234 aa11.02□□□□□ -0.65
PGBD2-203ENST00000462488 SSFA2P28290 1259 aa11.02□□□□□ -0.65
PGBD2-203ENST00000462488 RFC4P35249 363 aa11.02□□□□□ -0.65
PGBD2-203ENST00000462488 PTGER2P43116 358 aa11.02□□□□□ -0.65
PGBD2-203ENST00000462488 DCTN1Q14203 1278 aa11.02□□□□□ -0.65
PGBD2-203ENST00000462488 ZNF330Q9Y3S2 320 aaPredicted RBP11.02□□□□□ -0.65
PGBD2-203ENST00000462488 CRKLP46109 303 aaKnown RBP11.01□□□□□ -0.65
PGBD2-203ENST00000462488 NEUROD2Q15784 382 aa11.01□□□□□ -0.65
PGBD2-203ENST00000462488 DNAJC10Q8IXB1 793 aa11.01□□□□□ -0.65
PGBD2-203ENST00000462488 CCDC146Q8IYE0 955 aa11.01□□□□□ -0.65
PGBD2-203ENST00000462488 PELP1Q8IZL8 1130 aaKnown RBP11.01□□□□□ -0.65
PGBD2-203ENST00000462488 SLC4A9Q96Q91 983 aa11.01□□□□□ -0.65
PGBD2-203ENST00000462488 FHDC1Q9C0D6 1143 aaPredicted RBP11.01□□□□□ -0.65
PGBD2-203ENST00000462488 QSER1Q2KHR3 1735 aa11.01□□□□□ -0.65
PGBD2-203ENST00000462488 HTATSF1O43719 755 aaKnown RBP11□□□□□ -0.65
PGBD2-203ENST00000462488 STARD3NLO95772 234 aa11□□□□□ -0.65
PGBD2-203ENST00000462488 NFE2L2Q16236 605 aa11□□□□□ -0.65
PGBD2-203ENST00000462488 RC3H1Q5TC82 1133 aaKnown RBP11□□□□□ -0.65
PGBD2-203ENST00000462488 ZNF790Q6PG37 636 aa11□□□□□ -0.65
PGBD2-203ENST00000462488 FMNL2Q96PY5 1086 aa11□□□□□ -0.65
PGBD2-203ENST00000462488 RPS6KA4O75676 772 aa10.99□□□□□ -0.65
PGBD2-203ENST00000462488 CANXP27824 592 aaKnown RBP10.99□□□□□ -0.65
PGBD2-203ENST00000462488 RIPK4P57078 832 aa10.99□□□□□ -0.65
PGBD2-203ENST00000462488 CCDC87Q9NVE4 849 aa10.99□□□□□ -0.65
PGBD2-203ENST00000462488 CNTNAP4Q9C0A0 1308 aa10.99□□□□□ -0.65
PGBD2-203ENST00000462488 UBR3Q6ZT12 1888 aa10.98□□□□□ -0.65
PGBD2-203ENST00000462488 ZPR1O75312 459 aa10.98□□□□□ -0.65
PGBD2-203ENST00000462488 TAF7Q15545 349 aaPredicted RBP10.98□□□□□ -0.65
PGBD2-203ENST00000462488 AMIGO3Q86WK7 504 aa10.98□□□□□ -0.65
PGBD2-203ENST00000462488 ARHGEF1Q92888 912 aaKnown RBP10.98□□□□□ -0.65
PGBD2-203ENST00000462488 ZNF496Q96IT1 587 aaPredicted RBP10.98□□□□□ -0.65
PGBD2-203ENST00000462488 PLEKHF1Q96S99 279 aa10.98□□□□□ -0.65
PGBD2-203ENST00000462488 SYT17Q9BSW7 474 aa10.98□□□□□ -0.65
PGBD2-203ENST00000462488 TEX13AQ9BXU3 409 aaPredicted RBP10.98□□□□□ -0.65
PGBD2-203ENST00000462488 MIS18AQ9NYP9 233 aa10.98□□□□□ -0.65
PGBD2-203ENST00000462488 RRP7AQ9Y3A4 280 aaKnown RBP10.98□□□□□ -0.65
PGBD2-203ENST00000462488 LMOD3Q0VAK6 560 aa10.97□□□□□ -0.65
PGBD2-203ENST00000462488 VSIG10Q8N0Z9 540 aa10.97□□□□□ -0.65
PGBD2-203ENST00000462488 NLGN1Q8N2Q7 840 aa10.97□□□□□ -0.65
PGBD2-203ENST00000462488 RUNDC1Q96C34 613 aa10.97□□□□□ -0.65
PGBD2-203ENST00000462488 THUMPD2Q9BTF0 503 aaKnown RBP10.97□□□□□ -0.65
PGBD2-203ENST00000462488 LAS1LQ9Y4W2 734 aaKnown RBP10.97□□□□□ -0.65
PGBD2-203ENST00000462488 MRC1P22897 1456 aa10.97□□□□□ -0.65
PGBD2-203ENST00000462488 DLG5Q8TDM6 1919 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms