RNA–Protein interactions for RNA: ENST00000461903.1

HLA-A-205, Transcript of major histocompatibility complex, class I, A, human

Gene HLA-A, Length 1,352 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HLA-A-205	ENST00000461903	SALL2	Q9Y467	1007 aa	Predicted RBP	29.37	■■■□□ 2.29
HLA-A-205	ENST00000461903	CEMIP	Q8WUJ3	1361 aa		29.36	■■■□□ 2.29
HLA-A-205	ENST00000461903	PRIM1	P49642	420 aa	Known RBP	29.36	■■■□□ 2.29
HLA-A-205	ENST00000461903	TMOD3	Q9NYL9	352 aa		29.36	■■■□□ 2.29
HLA-A-205	ENST00000461903	TRIM35	Q9UPQ4	493 aa		29.36	■■■□□ 2.29
HLA-A-205	ENST00000461903	RREB1	Q92766	1687 aa		29.35	■■■□□ 2.29
HLA-A-205	ENST00000461903	NCBP3	Q53F19	620 aa	Known RBP	29.35	■■■□□ 2.29
HLA-A-205	ENST00000461903	SLC52A2	Q9HAB3	445 aa		29.34	■■■□□ 2.29
HLA-A-205	ENST00000461903	CCDC27	Q2M243	656 aa		29.33	■■■□□ 2.29
HLA-A-205	ENST00000461903	THUMPD2	Q9BTF0	503 aa	Known RBP	29.33	■■■□□ 2.29
HLA-A-205	ENST00000461903	KCNQ2	O43526	872 aa		29.32	■■■□□ 2.28
HLA-A-205	ENST00000461903	SIPA1L3	O60292	1781 aa	Predicted RBP	29.31	■■■□□ 2.28
HLA-A-205	ENST00000461903	APBA3	O96018	575 aa		29.31	■■■□□ 2.28
HLA-A-205	ENST00000461903	HNRNPU	Q00839	825 aa	Known RBP eCLIP	29.31	■■■□□ 2.28
HLA-A-205	ENST00000461903	BCL11B	Q9C0K0	894 aa	Predicted RBP	29.31	■■■□□ 2.28
HLA-A-205	ENST00000461903	BTAF1	O14981	1849 aa		29.31	■■■□□ 2.28
HLA-A-205	ENST00000461903	CALD1	Q05682	793 aa	Known RBP	29.3	■■■□□ 2.28
HLA-A-205	ENST00000461903	NUP188	Q5SRE5	1749 aa		29.29	■■■□□ 2.28
HLA-A-205	ENST00000461903	NFATC2IP	Q8NCF5	419 aa		29.29	■■■□□ 2.28
HLA-A-205	ENST00000461903	WWC1	Q8IX03	1113 aa		29.27	■■■□□ 2.28
HLA-A-205	ENST00000461903	PIGB	Q92521	554 aa		29.27	■■■□□ 2.28
HLA-A-205	ENST00000461903	TAF7	Q15545	349 aa	Predicted RBP	29.25	■■■□□ 2.27
HLA-A-205	ENST00000461903	PTF1A	Q7RTS3	328 aa		29.25	■■■□□ 2.27
HLA-A-205	ENST00000461903	PAPPA	Q13219	1627 aa		29.23	■■■□□ 2.27
HLA-A-205	ENST00000461903	BTBD11	A6QL63	1104 aa		29.23	■■■□□ 2.27
HLA-A-205	ENST00000461903	LAS1L	Q9Y4W2	734 aa	Known RBP	29.22	■■■□□ 2.27
HLA-A-205	ENST00000461903	WDR63	Q8IWG1	891 aa		29.21	■■■□□ 2.27
HLA-A-205	ENST00000461903	TTC5	Q8N0Z6	440 aa		29.2	■■■□□ 2.26
HLA-A-205	ENST00000461903	SMARCC1	Q92922	1105 aa	Predicted RBP	29.2	■■■□□ 2.26
HLA-A-205	ENST00000461903	KDM3B	Q7LBC6	1761 aa		29.19	■■■□□ 2.26
HLA-A-205	ENST00000461903	NBPF14	Q5TI25	921 aa		29.19	■■■□□ 2.26
HLA-A-205	ENST00000461903	TSPYL4	Q9UJ04	414 aa		29.19	■■■□□ 2.26
HLA-A-205	ENST00000461903	IL16	Q14005	1332 aa		29.19	■■■□□ 2.26
HLA-A-205	ENST00000461903	PALLD	Q8WX93	1383 aa		29.18	■■■□□ 2.26
HLA-A-205	ENST00000461903	GNAI1	P63096	354 aa		29.18	■■■□□ 2.26
HLA-A-205	ENST00000461903	ATG3	Q9NT62	314 aa		29.18	■■■□□ 2.26
HLA-A-205	ENST00000461903	IFT57	Q9NWB7	429 aa		29.18	■■■□□ 2.26
HLA-A-205	ENST00000461903	ASAP1	Q9ULH1	1129 aa		29.18	■■■□□ 2.26
HLA-A-205	ENST00000461903	ZNF521	Q96K83	1311 aa		29.18	■■■□□ 2.26
HLA-A-205	ENST00000461903	SLC39A6	Q13433	755 aa		29.17	■■■□□ 2.26
HLA-A-205	ENST00000461903	BABAM1	Q9NWV8	329 aa		29.17	■■■□□ 2.26
HLA-A-205	ENST00000461903	CFAP44	Q96MT7	982 aa		29.16	■■■□□ 2.26
HLA-A-205	ENST00000461903	RGPD3	A6NKT7	1758 aa	Predicted RBP	29.16	■■■□□ 2.26
HLA-A-205	ENST00000461903	RGPD4	Q7Z3J3	1758 aa		29.16	■■■□□ 2.26
HLA-A-205	ENST00000461903	ZNF790	Q6PG37	636 aa		29.15	■■■□□ 2.26
HLA-A-205	ENST00000461903	YTHDC1	Q96MU7	727 aa	Known RBP	29.15	■■■□□ 2.26
HLA-A-205	ENST00000461903	MIS18A	Q9NYP9	233 aa		29.15	■■■□□ 2.26
HLA-A-205	ENST00000461903	ZBED9	Q6R2W3	1325 aa		29.15	■■■□□ 2.26
HLA-A-205	ENST00000461903	UBR2	Q8IWV8	1755 aa		29.15	■■■□□ 2.26
HLA-A-205	ENST00000461903	LY75	O60449	1722 aa		29.14	■■■□□ 2.25
HLA-A-205	ENST00000461903	GOLGA2	Q08379	1002 aa		29.13	■■■□□ 2.25
HLA-A-205	ENST00000461903	CHL1	O00533	1208 aa		29.13	■■■□□ 2.25
HLA-A-205	ENST00000461903	KCP	Q6ZWJ8	1503 aa		29.12	■■■□□ 2.25
HLA-A-205	ENST00000461903	ZNF853	P0CG23	659 aa		29.12	■■■□□ 2.25
HLA-A-205	ENST00000461903	RBM42	Q9BTD8	480 aa	Known RBP	29.12	■■■□□ 2.25
HLA-A-205	ENST00000461903	PLSCR1	O15162	318 aa		29.11	■■■□□ 2.25
HLA-A-205	ENST00000461903	PTCD1	O75127	700 aa	Known RBP	29.11	■■■□□ 2.25
HLA-A-205	ENST00000461903	MBIP	Q9NS73	344 aa		29.11	■■■□□ 2.25
HLA-A-205	ENST00000461903	KCNQ3	O43525	872 aa		29.1	■■■□□ 2.25
HLA-A-205	ENST00000461903	FMNL2	Q96PY5	1086 aa		29.1	■■■□□ 2.25
HLA-A-205	ENST00000461903	MYH16	Q9H6N6	1097 aa		29.1	■■■□□ 2.25
HLA-A-205	ENST00000461903	SPON1	Q9HCB6	807 aa		29.09	■■■□□ 2.25
HLA-A-205	ENST00000461903	LOC102724428	A0A0B4J2F2	783 aa		29.07	■■■□□ 2.24
HLA-A-205	ENST00000461903		E9PSI1	815 aa		29.07	■■■□□ 2.24
HLA-A-205	ENST00000461903	SIK1	P57059	783 aa		29.07	■■■□□ 2.24
HLA-A-205	ENST00000461903	ZNF496	Q96IT1	587 aa	Predicted RBP	29.07	■■■□□ 2.24
HLA-A-205	ENST00000461903	TSR2	Q969E8	191 aa	Known RBP	29.06	■■■□□ 2.24
HLA-A-205	ENST00000461903	CCNL1	Q9UK58	526 aa	Predicted RBP	29.06	■■■□□ 2.24
HLA-A-205	ENST00000461903	FANCI	Q9NVI1	1328 aa		29.05	■■■□□ 2.24
HLA-A-205	ENST00000461903	ZNF831	Q5JPB2	1677 aa		29.05	■■■□□ 2.24
HLA-A-205	ENST00000461903	HEG1	Q9ULI3	1381 aa		29.05	■■■□□ 2.24
HLA-A-205	ENST00000461903	EIF4A1	P60842	406 aa	Known RBP	29.04	■■■□□ 2.24
HLA-A-205	ENST00000461903	TXNRD1	Q16881	649 aa		29.04	■■■□□ 2.24
HLA-A-205	ENST00000461903	SPINK5	Q9NQ38	1064 aa	Predicted RBP	29.04	■■■□□ 2.24
HLA-A-205	ENST00000461903	YY1	P25490	414 aa		29.03	■■■□□ 2.24
HLA-A-205	ENST00000461903	ATP6V1A	P38606	617 aa		29.03	■■■□□ 2.24
HLA-A-205	ENST00000461903	SLC27A3	Q5K4L6	730 aa		29.03	■■■□□ 2.24
HLA-A-205	ENST00000461903	PPP1R1B	Q9UD71	204 aa	Predicted RBP	29.03	■■■□□ 2.24
HLA-A-205	ENST00000461903	CIC	Q96RK0	1608 aa	Predicted RBP	29.03	■■■□□ 2.24
HLA-A-205	ENST00000461903	SLFN5	Q08AF3	891 aa		29.02	■■■□□ 2.24
HLA-A-205	ENST00000461903	VSIG10	Q8N0Z9	540 aa		29.02	■■■□□ 2.24
HLA-A-205	ENST00000461903	TJP1	Q07157	1748 aa		29.02	■■■□□ 2.24
HLA-A-205	ENST00000461903	CDCA7L	Q96GN5	454 aa		29.01	■■■□□ 2.24
HLA-A-205	ENST00000461903	C5	P01031	1676 aa		29	■■■□□ 2.23
HLA-A-205	ENST00000461903	LAMB4	A4D0S4	1761 aa		28.99	■■■□□ 2.23
HLA-A-205	ENST00000461903	CASZ1	Q86V15	1759 aa		28.99	■■■□□ 2.23
HLA-A-205	ENST00000461903	SNRPA1	P09661	255 aa	Known RBP	28.99	■■■□□ 2.23
HLA-A-205	ENST00000461903	HMGB2	P26583	209 aa	Known RBP	28.99	■■■□□ 2.23
HLA-A-205	ENST00000461903	SLC4A9	Q96Q91	983 aa		28.99	■■■□□ 2.23
HLA-A-205	ENST00000461903	TAF1L	Q8IZX4	1826 aa		28.98	■■■□□ 2.23
HLA-A-205	ENST00000461903	KCNQ4	P56696	695 aa		28.98	■■■□□ 2.23
HLA-A-205	ENST00000461903	TEX13A	Q9BXU3	409 aa	Predicted RBP	28.98	■■■□□ 2.23
HLA-A-205	ENST00000461903	COL5A3	P25940	1745 aa	Predicted RBP	28.97	■■■□□ 2.23
HLA-A-205	ENST00000461903	DNAJC10	Q8IXB1	793 aa		28.97	■■■□□ 2.23
HLA-A-205	ENST00000461903	ANO8	Q9HCE9	1232 aa	Predicted RBP	28.97	■■■□□ 2.23
HLA-A-205	ENST00000461903	GIGYF1	O75420	1035 aa	Predicted RBP	28.96	■■■□□ 2.23
HLA-A-205	ENST00000461903	ITPK1	Q13572	414 aa		28.96	■■■□□ 2.23
HLA-A-205	ENST00000461903	KRT24	Q2M2I5	525 aa		28.96	■■■□□ 2.23
HLA-A-205	ENST00000461903	PROM2	Q8N271	834 aa		28.96	■■■□□ 2.23
HLA-A-205	ENST00000461903	LRRC4B	Q9NT99	713 aa		28.95	■■■□□ 2.22

Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms