RNA–Protein interactions for RNA: ENST00000460366.5

VPS45-204, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-204ENST00000460366 AMOTQ4VCS5 1084 aa13.26□□□□□ -0.29
VPS45-204ENST00000460366 TNS2Q63HR2 1409 aa13.26□□□□□ -0.29
VPS45-204ENST00000460366 PARP4Q9UKK3 1724 aaKnown RBP13.26□□□□□ -0.29
VPS45-204ENST00000460366 SPG7Q9UQ90 795 aa13.26□□□□□ -0.29
VPS45-204ENST00000460366 RGPD1P0DJD0 1748 aa13.25□□□□□ -0.29
VPS45-204ENST00000460366 MEGF6O75095 1541 aa13.25□□□□□ -0.29
VPS45-204ENST00000460366 BCL9O00512 1426 aa13.25□□□□□ -0.29
VPS45-204ENST00000460366 U2AF1L5P0DN76 240 aaPredicted RBP13.25□□□□□ -0.29
VPS45-204ENST00000460366 U2AF1Q01081 240 aaKnown RBP eCLIP13.25□□□□□ -0.29
VPS45-204ENST00000460366 PLEKHO1Q53GL0 409 aaPredicted RBP13.25□□□□□ -0.29
VPS45-204ENST00000460366 DIEXFQ68CQ4 756 aaKnown RBP13.25□□□□□ -0.29
VPS45-204ENST00000460366 AEBP1Q8IUX7 1158 aa13.25□□□□□ -0.29
VPS45-204ENST00000460366 TMEM106CQ9BVX2 250 aa13.25□□□□□ -0.29
VPS45-204ENST00000460366 HMOX1P09601 288 aa13.24□□□□□ -0.29
VPS45-204ENST00000460366 C7P10643 843 aa13.24□□□□□ -0.29
VPS45-204ENST00000460366 FAM196AQ6ZSG2 479 aa13.24□□□□□ -0.29
VPS45-204ENST00000460366 MARCH10Q8NA82 808 aaPredicted RBP13.24□□□□□ -0.29
VPS45-204ENST00000460366 PNNQ9H307 717 aaKnown RBP13.24□□□□□ -0.29
VPS45-204ENST00000460366 TRIM35Q9UPQ4 493 aa13.24□□□□□ -0.29
VPS45-204ENST00000460366 WNK3Q9BYP7 1800 aa13.23□□□□□ -0.29
VPS45-204ENST00000460366 RSPH6AQ9H0K4 717 aa13.23□□□□□ -0.29
VPS45-204ENST00000460366 PCDH11XQ9BZA7 1347 aa13.22□□□□□ -0.29
VPS45-204ENST00000460366 PCDH11YQ9BZA8 1340 aa13.22□□□□□ -0.29
VPS45-204ENST00000460366 LRRC37A3O60309 1634 aa13.22□□□□□ -0.29
VPS45-204ENST00000460366 POTEFA5A3E0 1075 aa13.22□□□□□ -0.29
VPS45-204ENST00000460366 ZNF467Q7Z7K2 595 aaPredicted RBP13.22□□□□□ -0.29
VPS45-204ENST00000460366 DDX54Q8TDD1 881 aaKnown RBP13.22□□□□□ -0.29
VPS45-204ENST00000460366 CYP27B1O15528 508 aa13.21□□□□□ -0.29
VPS45-204ENST00000460366 NKX1-1Q15270 411 aaPredicted RBP13.21□□□□□ -0.29
VPS45-204ENST00000460366 CCDC125Q86Z20 511 aa13.21□□□□□ -0.29
VPS45-204ENST00000460366 BRWD3Q6RI45 1802 aa13.2□□□□□ -0.3
VPS45-204ENST00000460366 HSP90AB1P08238 724 aaKnown RBP13.2□□□□□ -0.3
VPS45-204ENST00000460366 PRKAR2BP31323 418 aa13.2□□□□□ -0.3
VPS45-204ENST00000460366 WDR43Q15061 677 aaKnown RBP eCLIP13.2□□□□□ -0.3
VPS45-204ENST00000460366 IFNL2Q8IZJ0 200 aa13.2□□□□□ -0.3
VPS45-204ENST00000460366 MRS2Q9HD23 443 aa13.2□□□□□ -0.3
VPS45-204ENST00000460366 CCER2I3L3R5 266 aa13.19□□□□□ -0.3
VPS45-204ENST00000460366 NEFMP07197 916 aa13.19□□□□□ -0.3
VPS45-204ENST00000460366 PHKG2P15735 406 aa13.19□□□□□ -0.3
VPS45-204ENST00000460366 CCDC184Q52MB2 194 aa13.19□□□□□ -0.3
VPS45-204ENST00000460366 GAS2L2Q8NHY3 880 aa13.19□□□□□ -0.3
VPS45-204ENST00000460366 PLEKHF1Q96S99 279 aa13.19□□□□□ -0.3
VPS45-204ENST00000460366 MTHFSDQ2M296 383 aaKnown RBP13.18□□□□□ -0.3
VPS45-204ENST00000460366 AKAP4Q5JQC9 854 aa13.18□□□□□ -0.3
VPS45-204ENST00000460366 ZNF530Q6P9A1 599 aaPredicted RBP13.18□□□□□ -0.3
VPS45-204ENST00000460366 PNISRQ8TF01 805 aaKnown RBP13.18□□□□□ -0.3
VPS45-204ENST00000460366 ADAMTS8Q9UP79 889 aa13.18□□□□□ -0.3
VPS45-204ENST00000460366 PKD1L3Q7Z443 1732 aa13.18□□□□□ -0.3
VPS45-204ENST00000460366 C1orf141Q5JVX7 400 aa13.17□□□□□ -0.3
VPS45-204ENST00000460366 FAM182BQ5T319 152 aa13.17□□□□□ -0.3
VPS45-204ENST00000460366 PHACTR3Q96KR7 559 aa13.17□□□□□ -0.3
VPS45-204ENST00000460366 UPF1Q92900 1129 aaKnown RBP eCLIP13.16□□□□□ -0.3
VPS45-204ENST00000460366 DCAF5Q96JK2 942 aa13.16□□□□□ -0.3
VPS45-204ENST00000460366 BCL11BQ9C0K0 894 aaPredicted RBP13.16□□□□□ -0.3
VPS45-204ENST00000460366 RUNDC1Q96C34 613 aa13.15□□□□□ -0.3
VPS45-204ENST00000460366 COLQQ9Y215 455 aaPredicted RBP13.15□□□□□ -0.3
VPS45-204ENST00000460366 SHANK3Q9BYB0 1731 aa13.14□□□□□ -0.31
VPS45-204ENST00000460366 ERVV-2B6SEH9 535 aa13.14□□□□□ -0.31
VPS45-204ENST00000460366 HTATSF1O43719 755 aaKnown RBP13.14□□□□□ -0.31
VPS45-204ENST00000460366 TRIM37O94972 964 aa13.14□□□□□ -0.31
VPS45-204ENST00000460366 POTEJP0CG39 1038 aa13.14□□□□□ -0.31
VPS45-204ENST00000460366 MAPK8IP3Q9UPT6 1336 aa13.13□□□□□ -0.31
VPS45-204ENST00000460366 GNAT3A8MTJ3 354 aa13.13□□□□□ -0.31
VPS45-204ENST00000460366 PRIM1P49642 420 aaKnown RBP13.13□□□□□ -0.31
VPS45-204ENST00000460366 PSEN1P49768 467 aa13.13□□□□□ -0.31
VPS45-204ENST00000460366 SF3B2Q13435 895 aaKnown RBP13.13□□□□□ -0.31
VPS45-204ENST00000460366 NFE2L2Q16236 605 aa13.12□□□□□ -0.31
VPS45-204ENST00000460366 IER5LQ5T953 404 aa13.12□□□□□ -0.31
VPS45-204ENST00000460366 MAP3K5Q99683 1374 aa13.11□□□□□ -0.31
VPS45-204ENST00000460366 RNMTO43148 476 aaKnown RBP13.11□□□□□ -0.31
VPS45-204ENST00000460366 KCNQ2O43526 872 aa13.11□□□□□ -0.31
VPS45-204ENST00000460366 MPRIPQ6WCQ1 1025 aa13.11□□□□□ -0.31
VPS45-204ENST00000460366 RNF25Q96BH1 459 aaPredicted RBP13.11□□□□□ -0.31
VPS45-204ENST00000460366 OTUD5Q96G74 571 aa13.11□□□□□ -0.31
VPS45-204ENST00000460366 ACSBG1Q96GR2 724 aa13.11□□□□□ -0.31
VPS45-204ENST00000460366 PLSCR1O15162 318 aa13.1□□□□□ -0.31
VPS45-204ENST00000460366 TMPOP42166 694 aaKnown RBP13.1□□□□□ -0.31
VPS45-204ENST00000460366 IL17REQ8NFR9 667 aa13.1□□□□□ -0.31
VPS45-204ENST00000460366 RTF1Q92541 710 aaKnown RBP13.1□□□□□ -0.31
VPS45-204ENST00000460366 KDM6AO15550 1401 aaPredicted RBP13.1□□□□□ -0.31
VPS45-204ENST00000460366 APBA3O96018 575 aa13.09□□□□□ -0.31
VPS45-204ENST00000460366 BAG6P46379 1132 aa13.09□□□□□ -0.31
VPS45-204ENST00000460366 CABP4P57796 275 aa13.09□□□□□ -0.31
VPS45-204ENST00000460366 LMOD3Q0VAK6 560 aa13.09□□□□□ -0.31
VPS45-204ENST00000460366 PDAP1Q13442 181 aaKnown RBP13.09□□□□□ -0.31
VPS45-204ENST00000460366 CCDC146Q8IYE0 955 aa13.09□□□□□ -0.31
VPS45-204ENST00000460366 PIGBQ92521 554 aa13.09□□□□□ -0.31
VPS45-204ENST00000460366 LGR6Q9HBX8 967 aa13.09□□□□□ -0.31
VPS45-204ENST00000460366 TMOD3Q9NYL9 352 aa13.09□□□□□ -0.31
VPS45-204ENST00000460366 SBF2Q86WG5 1849 aa13.09□□□□□ -0.31
VPS45-204ENST00000460366 CEMIPQ8WUJ3 1361 aa13.08□□□□□ -0.31
VPS45-204ENST00000460366 RIPK4P57078 832 aa13.08□□□□□ -0.32
VPS45-204ENST00000460366 PTF1AQ7RTS3 328 aa13.08□□□□□ -0.32
VPS45-204ENST00000460366 SMARCC1Q92922 1105 aaPredicted RBP13.08□□□□□ -0.32
VPS45-204ENST00000460366 SYTL4Q96C24 671 aaPredicted RBP13.08□□□□□ -0.32
VPS45-204ENST00000460366 SLC52A2Q9HAB3 445 aa13.08□□□□□ -0.32
VPS45-204ENST00000460366 APAF1O14727 1248 aa13.07□□□□□ -0.32
VPS45-204ENST00000460366 FAM9BQ8IZU0 186 aa13.07□□□□□ -0.32
VPS45-204ENST00000460366 NGEFQ8N5V2 710 aa13.07□□□□□ -0.32
VPS45-204ENST00000460366 NHSQ6T4R5 1651 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms