RNA–Protein interactions for RNA: ENST00000457845.4

TRAPPC12-212, Transcript of trafficking protein particle complex 12, humanhuman

TSL 4

Gene TRAPPC12, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-212ENST00000457845 CABP4P57796 275 aa15.49■□□□□ 0.07
TRAPPC12-212ENST00000457845 DCTN1Q14203 1278 aa15.49■□□□□ 0.07
TRAPPC12-212ENST00000457845 CCDC27Q2M243 656 aa15.49■□□□□ 0.07
TRAPPC12-212ENST00000457845 MCM10Q7L590 875 aa15.49■□□□□ 0.07
TRAPPC12-212ENST00000457845 NFATC2IPQ8NCF5 419 aa15.49■□□□□ 0.07
TRAPPC12-212ENST00000457845 TMOD3Q9NYL9 352 aa15.49■□□□□ 0.07
TRAPPC12-212ENST00000457845 NEUROD2Q15784 382 aa15.48■□□□□ 0.07
TRAPPC12-212ENST00000457845 NGEFQ8N5V2 710 aa15.48■□□□□ 0.07
TRAPPC12-212ENST00000457845 SYTL4Q96C24 671 aaPredicted RBP15.48■□□□□ 0.07
TRAPPC12-212ENST00000457845 RREB1Q92766 1687 aa15.48■□□□□ 0.07
TRAPPC12-212ENST00000457845 TAF1LQ8IZX4 1826 aa15.47■□□□□ 0.07
TRAPPC12-212ENST00000457845 APBA3O96018 575 aa15.46■□□□□ 0.07
TRAPPC12-212ENST00000457845 TEFQ10587 303 aa15.46■□□□□ 0.07
TRAPPC12-212ENST00000457845 CICQ96RK0 1608 aaPredicted RBP15.46■□□□□ 0.06
TRAPPC12-212ENST00000457845 SOCS7O14512 581 aa15.45■□□□□ 0.06
TRAPPC12-212ENST00000457845 SF3B2Q13435 895 aaKnown RBP15.45■□□□□ 0.06
TRAPPC12-212ENST00000457845 ATG3Q9NT62 314 aa15.45■□□□□ 0.06
TRAPPC12-212ENST00000457845 BAG6P46379 1132 aa15.44■□□□□ 0.06
TRAPPC12-212ENST00000457845 TAF7Q15545 349 aaPredicted RBP15.44■□□□□ 0.06
TRAPPC12-212ENST00000457845 WWC1Q8IX03 1113 aa15.44■□□□□ 0.06
TRAPPC12-212ENST00000457845 SMARCC1Q92922 1105 aaPredicted RBP15.44■□□□□ 0.06
TRAPPC12-212ENST00000457845 CAMKK2Q96RR4 588 aa15.44■□□□□ 0.06
TRAPPC12-212ENST00000457845 THUMPD2Q9BTF0 503 aaKnown RBP15.44■□□□□ 0.06
TRAPPC12-212ENST00000457845 ASAP1Q9ULH1 1129 aa15.44■□□□□ 0.06
TRAPPC12-212ENST00000457845 NUP188Q5SRE5 1749 aa15.43■□□□□ 0.06
TRAPPC12-212ENST00000457845 BABAM1Q9NWV8 329 aa15.43■□□□□ 0.06
TRAPPC12-212ENST00000457845 KCPQ6ZWJ8 1503 aa15.43■□□□□ 0.06
TRAPPC12-212ENST00000457845 ZNF521Q96K83 1311 aa15.43■□□□□ 0.06
TRAPPC12-212ENST00000457845 PALLDQ8WX93 1383 aa15.42■□□□□ 0.06
TRAPPC12-212ENST00000457845 DEFB132Q7Z7B7 95 aa15.42■□□□□ 0.06
TRAPPC12-212ENST00000457845 PROM2Q8N271 834 aa15.42■□□□□ 0.06
TRAPPC12-212ENST00000457845 COL5A3P25940 1745 aaPredicted RBP15.42■□□□□ 0.06
TRAPPC12-212ENST00000457845 TJP1Q07157 1748 aa15.41■□□□□ 0.06
TRAPPC12-212ENST00000457845 BTBD11A6QL63 1104 aa15.41■□□□□ 0.06
TRAPPC12-212ENST00000457845 ZNF853P0CG23 659 aa15.41■□□□□ 0.06
TRAPPC12-212ENST00000457845 EN1Q05925 392 aaPredicted RBP15.41■□□□□ 0.06
TRAPPC12-212ENST00000457845 ZNF790Q6PG37 636 aa15.41■□□□□ 0.06
TRAPPC12-212ENST00000457845 C5P01031 1676 aa15.41■□□□□ 0.06
TRAPPC12-212ENST00000457845 SENP3-EIF4A1A0A087X0R7 540 aa15.4■□□□□ 0.06
TRAPPC12-212ENST00000457845 CHL1O00533 1208 aa15.4■□□□□ 0.06
TRAPPC12-212ENST00000457845 CALD1Q05682 793 aaKnown RBP15.4■□□□□ 0.06
TRAPPC12-212ENST00000457845 SLC39A6Q13433 755 aa15.4■□□□□ 0.06
TRAPPC12-212ENST00000457845 EZH2Q15910 746 aaKnown RBP15.4■□□□□ 0.06
TRAPPC12-212ENST00000457845 TXNRD1Q16881 649 aa15.4■□□□□ 0.06
TRAPPC12-212ENST00000457845 WDR63Q8IWG1 891 aa15.4■□□□□ 0.06
TRAPPC12-212ENST00000457845 CFAP44Q96MT7 982 aa15.4■□□□□ 0.06
TRAPPC12-212ENST00000457845 IL16Q14005 1332 aa15.4■□□□□ 0.06
TRAPPC12-212ENST00000457845 MYH14Q7Z406 1995 aaKnown RBP15.39■□□□□ 0.05
TRAPPC12-212ENST00000457845 SLC27A3Q5K4L6 730 aa15.39■□□□□ 0.05
TRAPPC12-212ENST00000457845 SLC4A9Q96Q91 983 aa15.39■□□□□ 0.05
TRAPPC12-212ENST00000457845 HEG1Q9ULI3 1381 aa15.38■□□□□ 0.05
TRAPPC12-212ENST00000457845 LOC102724428A0A0B4J2F2 783 aa15.38■□□□□ 0.05
TRAPPC12-212ENST00000457845 KCNQ3O43525 872 aa15.38■□□□□ 0.05
TRAPPC12-212ENST00000457845 SIK1P57059 783 aa15.38■□□□□ 0.05
TRAPPC12-212ENST00000457845 IFT57Q9NWB7 429 aa15.38■□□□□ 0.05
TRAPPC12-212ENST00000457845 MIS18AQ9NYP9 233 aa15.38■□□□□ 0.05
TRAPPC12-212ENST00000457845 SALL2Q9Y467 1007 aaPredicted RBP15.38■□□□□ 0.05
TRAPPC12-212ENST00000457845 LAMB4A4D0S4 1761 aa15.37■□□□□ 0.05
TRAPPC12-212ENST00000457845 GNAI1P63096 354 aa15.37■□□□□ 0.05
TRAPPC12-212ENST00000457845 TTC5Q8N0Z6 440 aa15.37■□□□□ 0.05
TRAPPC12-212ENST00000457845 VSIG10Q8N0Z9 540 aa15.37■□□□□ 0.05
TRAPPC12-212ENST00000457845 ZNF496Q96IT1 587 aaPredicted RBP15.37■□□□□ 0.05
TRAPPC12-212ENST00000457845 LRRC4BQ9NT99 713 aa15.37■□□□□ 0.05
TRAPPC12-212ENST00000457845 TSPYL4Q9UJ04 414 aa15.36■□□□□ 0.05
TRAPPC12-212ENST00000457845 CCNL1Q9UK58 526 aaPredicted RBP15.36■□□□□ 0.05
TRAPPC12-212ENST00000457845 QSER1Q2KHR3 1735 aa15.36■□□□□ 0.05
TRAPPC12-212ENST00000457845 C4BP0C0L5 1744 aa15.35■□□□□ 0.05
TRAPPC12-212ENST00000457845 PTCD1O75127 700 aaKnown RBP15.35■□□□□ 0.05
TRAPPC12-212ENST00000457845 HMGB2P26583 209 aaKnown RBP15.35■□□□□ 0.05
TRAPPC12-212ENST00000457845 EIF4A1P60842 406 aaKnown RBP15.35■□□□□ 0.05
TRAPPC12-212ENST00000457845 FMNL2Q96PY5 1086 aa15.35■□□□□ 0.05
TRAPPC12-212ENST00000457845 RBM42Q9BTD8 480 aaKnown RBP15.35■□□□□ 0.05
TRAPPC12-212ENST00000457845 TUBGCP6Q96RT7 1819 aa15.35■□□□□ 0.05
TRAPPC12-212ENST00000457845 UBR3Q6ZT12 1888 aa15.35■□□□□ 0.05
TRAPPC12-212ENST00000457845 ATP6V1AP38606 617 aa15.34■□□□□ 0.05
TRAPPC12-212ENST00000457845 ITPK1Q13572 414 aa15.34■□□□□ 0.05
TRAPPC12-212ENST00000457845 MBIPQ9NS73 344 aa15.34■□□□□ 0.05
TRAPPC12-212ENST00000457845 HNRNPUQ00839 825 aaKnown RBP eCLIP15.33■□□□□ 0.04
TRAPPC12-212ENST00000457845 SPINK5Q9NQ38 1064 aaPredicted RBP15.33■□□□□ 0.04
TRAPPC12-212ENST00000457845 CACNA1FO60840 1977 aa15.33■□□□□ 0.04
TRAPPC12-212ENST00000457845 KCNQ4P56696 695 aa15.32■□□□□ 0.04
TRAPPC12-212ENST00000457845 LAS1LQ9Y4W2 734 aaKnown RBP15.32■□□□□ 0.04
TRAPPC12-212ENST00000457845 GIGYF1O75420 1035 aaPredicted RBP15.31■□□□□ 0.04
TRAPPC12-212ENST00000457845 SNRPA1P09661 255 aaKnown RBP15.31■□□□□ 0.04
TRAPPC12-212ENST00000457845 GOLGA2Q08379 1002 aa15.31■□□□□ 0.04
TRAPPC12-212ENST00000457845 DNAJC10Q8IXB1 793 aa15.31■□□□□ 0.04
TRAPPC12-212ENST00000457845 TRMT2AQ8IZ69 625 aaKnown RBP15.31■□□□□ 0.04
TRAPPC12-212ENST00000457845 LINC00116Q8NCU8 138 aa15.31■□□□□ 0.04
TRAPPC12-212ENST00000457845 TEX13AQ9BXU3 409 aaPredicted RBP15.31■□□□□ 0.04
TRAPPC12-212ENST00000457845 ZBED9Q6R2W3 1325 aa15.31■□□□□ 0.04
TRAPPC12-212ENST00000457845 RC3H1Q5TC82 1133 aaKnown RBP15.3■□□□□ 0.04
TRAPPC12-212ENST00000457845 AKT1S1Q96B36 256 aa15.3■□□□□ 0.04
TRAPPC12-212ENST00000457845 CNTNAP4Q9C0A0 1308 aa15.29■□□□□ 0.04
TRAPPC12-212ENST00000457845 FANCIQ9NVI1 1328 aa15.29■□□□□ 0.04
TRAPPC12-212ENST00000457845 CYP19A1P11511 503 aaPredicted RBP15.29■□□□□ 0.04
TRAPPC12-212ENST00000457845 SLFN5Q08AF3 891 aa15.29■□□□□ 0.04
TRAPPC12-212ENST00000457845 USP16Q9Y5T5 823 aa15.29■□□□□ 0.04
TRAPPC12-212ENST00000457845 PRAMEF22A3QJZ6 481 aa15.28■□□□□ 0.04
TRAPPC12-212ENST00000457845 E9PSI1 815 aa15.28■□□□□ 0.04
TRAPPC12-212ENST00000457845 HOXB7P09629 217 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms