RNA–Protein interactions for RNA: ENST00000457373.5

RFX3-210, Transcript of regulatory factor X3, humanhuman

TSL 5

Gene RFX3, Length 822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-210ENST00000457373 HSP90AB1P08238 724 aaKnown RBP13.45□□□□□ -0.26
RFX3-210ENST00000457373 TXNRD1Q16881 649 aa13.45□□□□□ -0.26
RFX3-210ENST00000457373 RSPH6AQ9H0K4 717 aa13.45□□□□□ -0.26
RFX3-210ENST00000457373 RGPD3A6NKT7 1758 aaPredicted RBP13.45□□□□□ -0.26
RFX3-210ENST00000457373 RGPD4Q7Z3J3 1758 aa13.45□□□□□ -0.26
RFX3-210ENST00000457373 NUP188Q5SRE5 1749 aa13.44□□□□□ -0.26
RFX3-210ENST00000457373 AKAP4Q5JQC9 854 aa13.44□□□□□ -0.26
RFX3-210ENST00000457373 DCAF5Q96JK2 942 aa13.44□□□□□ -0.26
RFX3-210ENST00000457373 VIRMAQ69YN4 1812 aaKnown RBP13.43□□□□□ -0.26
RFX3-210ENST00000457373 PSDA5PKW4 1024 aaPredicted RBP13.43□□□□□ -0.26
RFX3-210ENST00000457373 FCHSD2O94868 740 aa13.43□□□□□ -0.26
RFX3-210ENST00000457373 NBPF14Q5TI25 921 aa13.43□□□□□ -0.26
RFX3-210ENST00000457373 PIGBQ92521 554 aa13.43□□□□□ -0.26
RFX3-210ENST00000457373 PHACTR3Q96KR7 559 aa13.43□□□□□ -0.26
RFX3-210ENST00000457373 TMOD3Q9NYL9 352 aa13.43□□□□□ -0.26
RFX3-210ENST00000457373 ANP32CO43423 234 aa13.42□□□□□ -0.26
RFX3-210ENST00000457373 CABP4P57796 275 aa13.42□□□□□ -0.26
RFX3-210ENST00000457373 GAS2L2Q8NHY3 880 aa13.42□□□□□ -0.26
RFX3-210ENST00000457373 CFAP44Q96MT7 982 aa13.42□□□□□ -0.26
RFX3-210ENST00000457373 KDM6AO15550 1401 aaPredicted RBP13.41□□□□□ -0.26
RFX3-210ENST00000457373 SCN11AQ9UI33 1791 aa13.41□□□□□ -0.26
RFX3-210ENST00000457373 ERVV-2B6SEH9 535 aa13.41□□□□□ -0.26
RFX3-210ENST00000457373 NEFMP07197 916 aa13.41□□□□□ -0.26
RFX3-210ENST00000457373 KCNQ4P56696 695 aa13.41□□□□□ -0.26
RFX3-210ENST00000457373 R3HDM1Q15032 1099 aaKnown RBP13.41□□□□□ -0.26
RFX3-210ENST00000457373 LGR6Q9HBX8 967 aa13.41□□□□□ -0.26
RFX3-210ENST00000457373 SSUH2Q9Y2M2 353 aa13.41□□□□□ -0.26
RFX3-210ENST00000457373 LY75O60449 1722 aa13.41□□□□□ -0.26
RFX3-210ENST00000457373 EP400Q96L91 3159 aa13.4□□□□□ -0.26
RFX3-210ENST00000457373 RNMTO43148 476 aaKnown RBP13.4□□□□□ -0.26
RFX3-210ENST00000457373 PLCD3Q8N3E9 789 aa13.4□□□□□ -0.26
RFX3-210ENST00000457373 GNAT3A8MTJ3 354 aa13.39□□□□□ -0.27
RFX3-210ENST00000457373 NFATC2IPQ8NCF5 419 aa13.39□□□□□ -0.27
RFX3-210ENST00000457373 SMARCC1Q92922 1105 aaPredicted RBP13.39□□□□□ -0.27
RFX3-210ENST00000457373 PNNQ9H307 717 aaKnown RBP13.39□□□□□ -0.27
RFX3-210ENST00000457373 LRRC4BQ9NT99 713 aa13.39□□□□□ -0.27
RFX3-210ENST00000457373 CCNL1Q9UK58 526 aaPredicted RBP13.39□□□□□ -0.27
RFX3-210ENST00000457373 ASAP1Q9ULH1 1129 aa13.39□□□□□ -0.27
RFX3-210ENST00000457373 PALLDQ8WX93 1383 aa13.39□□□□□ -0.27
RFX3-210ENST00000457373 WDR43Q15061 677 aaKnown RBP eCLIP13.38□□□□□ -0.27
RFX3-210ENST00000457373 SLC27A3Q5K4L6 730 aa13.38□□□□□ -0.27
RFX3-210ENST00000457373 ANO8Q9HCE9 1232 aaPredicted RBP13.38□□□□□ -0.27
RFX3-210ENST00000457373 ATG3Q9NT62 314 aa13.38□□□□□ -0.27
RFX3-210ENST00000457373 STK32BQ9NY57 414 aa13.38□□□□□ -0.27
RFX3-210ENST00000457373 MAP3K5Q99683 1374 aa13.37□□□□□ -0.27
RFX3-210ENST00000457373 SPDYE2BA6NHP3 402 aa13.37□□□□□ -0.27
RFX3-210ENST00000457373 SPDYE6P0CI01 402 aa13.37□□□□□ -0.27
RFX3-210ENST00000457373 SPDYE2Q495Y8 402 aa13.37□□□□□ -0.27
RFX3-210ENST00000457373 CCDC184Q52MB2 194 aa13.37□□□□□ -0.27
RFX3-210ENST00000457373 PLEKHF1Q96S99 279 aa13.37□□□□□ -0.27
RFX3-210ENST00000457373 MAPK8IP3Q9UPT6 1336 aa13.37□□□□□ -0.27
RFX3-210ENST00000457373 SLC15A2Q16348 729 aa13.36□□□□□ -0.27
RFX3-210ENST00000457373 IL17REQ8NFR9 667 aa13.36□□□□□ -0.27
RFX3-210ENST00000457373 RTF1Q92541 710 aaKnown RBP13.36□□□□□ -0.27
RFX3-210ENST00000457373 RBM42Q9BTD8 480 aaKnown RBP13.36□□□□□ -0.27
RFX3-210ENST00000457373 SLC52A2Q9HAB3 445 aa13.36□□□□□ -0.27
RFX3-210ENST00000457373 DLG5Q8TDM6 1919 aa13.36□□□□□ -0.27
RFX3-210ENST00000457373 TEFQ10587 303 aa13.35□□□□□ -0.27
RFX3-210ENST00000457373 CCDC146Q8IYE0 955 aa13.35□□□□□ -0.27
RFX3-210ENST00000457373 ADAMTS8Q9UP79 889 aa13.35□□□□□ -0.27
RFX3-210ENST00000457373 ADAMTS7Q9UKP4 1686 aa13.34□□□□□ -0.27
RFX3-210ENST00000457373 LOC102724428A0A0B4J2F2 783 aa13.34□□□□□ -0.27
RFX3-210ENST00000457373 ATP6V1AP38606 617 aa13.34□□□□□ -0.27
RFX3-210ENST00000457373 SIK1P57059 783 aa13.34□□□□□ -0.27
RFX3-210ENST00000457373 DCTN1Q14203 1278 aa13.34□□□□□ -0.27
RFX3-210ENST00000457373 MCM10Q7L590 875 aa13.34□□□□□ -0.27
RFX3-210ENST00000457373 TAF1LQ8IZX4 1826 aa13.34□□□□□ -0.27
RFX3-210ENST00000457373 PAPPAQ13219 1627 aa13.33□□□□□ -0.28
RFX3-210ENST00000457373 PTCD1O75127 700 aaKnown RBP13.33□□□□□ -0.28
RFX3-210ENST00000457373 SLC39A6Q13433 755 aa13.33□□□□□ -0.28
RFX3-210ENST00000457373 NFE2L2Q16236 605 aa13.33□□□□□ -0.28
RFX3-210ENST00000457373 ZNF827Q17R98 1081 aa13.33□□□□□ -0.28
RFX3-210ENST00000457373 C5P01031 1676 aa13.33□□□□□ -0.28
RFX3-210ENST00000457373 TPRNQ4KMQ1 711 aa13.32□□□□□ -0.28
RFX3-210ENST00000457373 MIER1Q8N108 512 aa13.32□□□□□ -0.28
RFX3-210ENST00000457373 SPRYD3Q8NCJ5 442 aa13.32□□□□□ -0.28
RFX3-210ENST00000457373 AKT1S1Q96B36 256 aa13.32□□□□□ -0.28
RFX3-210ENST00000457373 MRS2Q9HD23 443 aa13.32□□□□□ -0.28
RFX3-210ENST00000457373 MRC1P22897 1456 aa13.31□□□□□ -0.28
RFX3-210ENST00000457373 HTATSF1O43719 755 aaKnown RBP13.31□□□□□ -0.28
RFX3-210ENST00000457373 DSG3P32926 999 aa13.31□□□□□ -0.28
RFX3-210ENST00000457373 RIPK4P57078 832 aa13.31□□□□□ -0.28
RFX3-210ENST00000457373 ITPK1Q13572 414 aa13.31□□□□□ -0.28
RFX3-210ENST00000457373 NEUROD2Q15784 382 aa13.31□□□□□ -0.28
RFX3-210ENST00000457373 RUNDC1Q96C34 613 aa13.31□□□□□ -0.28
RFX3-210ENST00000457373 TSHZ2Q9NRE2 1034 aa13.31□□□□□ -0.28
RFX3-210ENST00000457373 TFCP2L1Q9NZI6 479 aa13.31□□□□□ -0.28
RFX3-210ENST00000457373 RRP7AQ9Y3A4 280 aaKnown RBP13.31□□□□□ -0.28
RFX3-210ENST00000457373 SIPA1L3O60292 1781 aaPredicted RBP13.3□□□□□ -0.28
RFX3-210ENST00000457373 TTC5Q8N0Z6 440 aa13.3□□□□□ -0.28
RFX3-210ENST00000457373 SLC4A9Q96Q91 983 aa13.3□□□□□ -0.28
RFX3-210ENST00000457373 PDGFDQ9GZP0 370 aaPredicted RBP13.3□□□□□ -0.28
RFX3-210ENST00000457373 TUBGCP6Q96RT7 1819 aa13.29□□□□□ -0.28
RFX3-210ENST00000457373 BTBD11A6QL63 1104 aa13.29□□□□□ -0.28
RFX3-210ENST00000457373 HMGB2P26583 209 aaKnown RBP13.29□□□□□ -0.28
RFX3-210ENST00000457373 TMPOP42166 694 aaKnown RBP13.29□□□□□ -0.28
RFX3-210ENST00000457373 LINC00116Q8NCU8 138 aa13.29□□□□□ -0.28
RFX3-210ENST00000457373 AK7Q96M32 723 aa13.29□□□□□ -0.28
RFX3-210ENST00000457373 C4BP0C0L5 1744 aa13.29□□□□□ -0.28
RFX3-210ENST00000457373 CEMIPQ8WUJ3 1361 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms