RNA–Protein interactions for RNA: ENST00000455841.6

GTF2IRD1-203, Transcript of GTF2I repeat domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene GTF2IRD1, Length 3,315 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IRD1-203ENST00000455841 OS9Q13438 667 aaPredicted RBP18.98■□□□□ 0.63
GTF2IRD1-203ENST00000455841 TATP17735 454 aaPredicted RBP18.98■□□□□ 0.63
GTF2IRD1-203ENST00000455841 HSP90AA1P07900 732 aaKnown RBP18.97■□□□□ 0.63
GTF2IRD1-203ENST00000455841 BECN1Q14457 450 aa18.97■□□□□ 0.63
GTF2IRD1-203ENST00000455841 INTS3Q68E01 1043 aaKnown RBP18.97■□□□□ 0.63
GTF2IRD1-203ENST00000455841 C1orf167Q5SNV9 1468 aa18.97■□□□□ 0.63
GTF2IRD1-203ENST00000455841 UBTFL1P0CB47 393 aaPredicted RBP18.97■□□□□ 0.63
GTF2IRD1-203ENST00000455841 PROSER3Q2NL68 480 aa18.97■□□□□ 0.63
GTF2IRD1-203ENST00000455841 MAP4K4O95819 1239 aaPredicted RBP18.97■□□□□ 0.63
GTF2IRD1-203ENST00000455841 GNAI2P04899 355 aa18.97■□□□□ 0.63
GTF2IRD1-203ENST00000455841 RNMTO43148 476 aaKnown RBP18.96■□□□□ 0.63
GTF2IRD1-203ENST00000455841 EVA1CP58658 441 aa18.96■□□□□ 0.63
GTF2IRD1-203ENST00000455841 PTPRCP08575 1304 aa18.96■□□□□ 0.63
GTF2IRD1-203ENST00000455841 PNMA6EA0A0J9YXQ4 647 aa18.96■□□□□ 0.63
GTF2IRD1-203ENST00000455841 TRIM6-TRIM34B2RNG4 842 aa18.96■□□□□ 0.63
GTF2IRD1-203ENST00000455841 NPHP3Q7Z494 1330 aa18.95■□□□□ 0.62
GTF2IRD1-203ENST00000455841 AKAP4Q5JQC9 854 aa18.95■□□□□ 0.62
GTF2IRD1-203ENST00000455841 CHD2O14647 1828 aaKnown RBP18.95■□□□□ 0.62
GTF2IRD1-203ENST00000455841 FMN2Q9NZ56 1722 aa18.95■□□□□ 0.62
GTF2IRD1-203ENST00000455841 RILPL2Q969X0 211 aa18.95■□□□□ 0.62
GTF2IRD1-203ENST00000455841 HMMRO75330 724 aa18.95■□□□□ 0.62
GTF2IRD1-203ENST00000455841 CCT4P50991 539 aaKnown RBP18.95■□□□□ 0.62
GTF2IRD1-203ENST00000455841 ANKRD44Q8N8A2 993 aa18.95■□□□□ 0.62
GTF2IRD1-203ENST00000455841 CCDC9Q9Y3X0 531 aaKnown RBP18.95■□□□□ 0.62
GTF2IRD1-203ENST00000455841 PTCD1O75127 700 aaKnown RBP18.94■□□□□ 0.62
GTF2IRD1-203ENST00000455841 EIF4A1P60842 406 aaKnown RBP18.94■□□□□ 0.62
GTF2IRD1-203ENST00000455841 C9orf78Q9NZ63 289 aaPredicted RBP18.94■□□□□ 0.62
GTF2IRD1-203ENST00000455841 KIAA0232Q92628 1395 aa18.94■□□□□ 0.62
GTF2IRD1-203ENST00000455841 ERBB3P21860 1342 aa18.94■□□□□ 0.62
GTF2IRD1-203ENST00000455841 DEKP35659 375 aaKnown RBP18.94■□□□□ 0.62
GTF2IRD1-203ENST00000455841 CWF19L2Q2TBE0 894 aaKnown RBP18.94■□□□□ 0.62
GTF2IRD1-203ENST00000455841 ADAMTSL3P82987 1691 aa18.93■□□□□ 0.62
GTF2IRD1-203ENST00000455841 BRPF1P55201 1214 aaPredicted RBP18.93■□□□□ 0.62
GTF2IRD1-203ENST00000455841 SURF6O75683 361 aaKnown RBP18.93■□□□□ 0.62
GTF2IRD1-203ENST00000455841 SRCIN1Q9C0H9 1055 aa18.93■□□□□ 0.62
GTF2IRD1-203ENST00000455841 RBM42Q9BTD8 480 aaKnown RBP18.92■□□□□ 0.62
GTF2IRD1-203ENST00000455841 RTL1A6NKG5 1358 aa18.92■□□□□ 0.62
GTF2IRD1-203ENST00000455841 NBPF7P0C2Y1 421 aaPredicted RBP18.92■□□□□ 0.62
GTF2IRD1-203ENST00000455841 TBC1D9Q6ZT07 1266 aa18.92■□□□□ 0.62
GTF2IRD1-203ENST00000455841 FRAT2O75474 233 aaPredicted RBP18.92■□□□□ 0.62
GTF2IRD1-203ENST00000455841 AMOTQ4VCS5 1084 aa18.92■□□□□ 0.62
GTF2IRD1-203ENST00000455841 NUTM1Q86Y26 1132 aa18.92■□□□□ 0.62
GTF2IRD1-203ENST00000455841 TTC5Q8N0Z6 440 aa18.92■□□□□ 0.62
GTF2IRD1-203ENST00000455841 KDM4FA0A1W2PPD8 638 aa18.91■□□□□ 0.62
GTF2IRD1-203ENST00000455841 BRINP3Q76B58 766 aa18.91■□□□□ 0.62
GTF2IRD1-203ENST00000455841 TBC1D32Q96NH3 1257 aa18.91■□□□□ 0.62
GTF2IRD1-203ENST00000455841 SLAIN2Q9P270 581 aa18.91■□□□□ 0.62
GTF2IRD1-203ENST00000455841 RPAP2Q8IXW5 612 aaPredicted RBP18.91■□□□□ 0.62
GTF2IRD1-203ENST00000455841 SRGAP3O43295 1099 aa18.9■□□□□ 0.62
GTF2IRD1-203ENST00000455841 HTATSF1O43719 755 aaKnown RBP18.9■□□□□ 0.62
GTF2IRD1-203ENST00000455841 NOL8Q76FK4 1167 aaKnown RBP18.9■□□□□ 0.62
GTF2IRD1-203ENST00000455841 DCTPP1Q9H773 170 aa18.9■□□□□ 0.62
GTF2IRD1-203ENST00000455841 NFKBIBQ15653 356 aa18.9■□□□□ 0.62
GTF2IRD1-203ENST00000455841 PLEKHM2Q8IWE5 1019 aa18.9■□□□□ 0.62
GTF2IRD1-203ENST00000455841 MAP3K2Q9Y2U5 619 aa18.9■□□□□ 0.62
GTF2IRD1-203ENST00000455841 TBC1D2Q9BYX2 928 aa18.9■□□□□ 0.62
GTF2IRD1-203ENST00000455841 RIC3Q7Z5B4 369 aa18.89■□□□□ 0.62
GTF2IRD1-203ENST00000455841 SYTL4Q96C24 671 aaPredicted RBP18.89■□□□□ 0.62
GTF2IRD1-203ENST00000455841 GSPT1P15170 499 aaKnown RBP18.89■□□□□ 0.61
GTF2IRD1-203ENST00000455841 PXDNQ92626 1479 aa18.89■□□□□ 0.61
GTF2IRD1-203ENST00000455841 GNAI3P08754 354 aa18.89■□□□□ 0.61
GTF2IRD1-203ENST00000455841 DNAAF4Q8WXU2 420 aa18.89■□□□□ 0.61
GTF2IRD1-203ENST00000455841 SIL1Q9H173 461 aa18.89■□□□□ 0.61
GTF2IRD1-203ENST00000455841 USP44Q9H0E7 712 aa18.88■□□□□ 0.61
GTF2IRD1-203ENST00000455841 CABP4P57796 275 aa18.87■□□□□ 0.61
GTF2IRD1-203ENST00000455841 PPP1R42Q7Z4L9 355 aa18.87■□□□□ 0.61
GTF2IRD1-203ENST00000455841 LTN1O94822 1766 aa18.87■□□□□ 0.61
GTF2IRD1-203ENST00000455841 SPG7Q9UQ90 795 aa18.87■□□□□ 0.61
GTF2IRD1-203ENST00000455841 HSP90AB1P08238 724 aaKnown RBP18.87■□□□□ 0.61
GTF2IRD1-203ENST00000455841 HSCBQ8IWL3 235 aa18.87■□□□□ 0.61
GTF2IRD1-203ENST00000455841 RGPD2P0DJD1 1756 aa18.87■□□□□ 0.61
GTF2IRD1-203ENST00000455841 ZNF496Q96IT1 587 aaPredicted RBP18.86■□□□□ 0.61
GTF2IRD1-203ENST00000455841 CHMP3Q9Y3E7 222 aa18.86■□□□□ 0.61
GTF2IRD1-203ENST00000455841 PA2G4Q9UQ80 394 aaKnown RBP18.86■□□□□ 0.61
GTF2IRD1-203ENST00000455841 RGS12O14924 1447 aa18.86■□□□□ 0.61
GTF2IRD1-203ENST00000455841 ATP5J2-PTCD1G3V325 749 aa18.85■□□□□ 0.61
GTF2IRD1-203ENST00000455841 USP16Q9Y5T5 823 aa18.85■□□□□ 0.61
GTF2IRD1-203ENST00000455841 SDSP20132 328 aa18.85■□□□□ 0.61
GTF2IRD1-203ENST00000455841 BMP2KLQ5H9B9 411 aa18.85■□□□□ 0.61
GTF2IRD1-203ENST00000455841 CDC45O75419 566 aa18.84■□□□□ 0.61
GTF2IRD1-203ENST00000455841 GIGYF1O75420 1035 aaPredicted RBP18.84■□□□□ 0.61
GTF2IRD1-203ENST00000455841 ADAMTS2O95450 1211 aa18.84■□□□□ 0.61
GTF2IRD1-203ENST00000455841 DBF4Q9UBU7 674 aaPredicted RBP18.84■□□□□ 0.61
GTF2IRD1-203ENST00000455841 IFNL2Q8IZJ0 200 aa18.84■□□□□ 0.61
GTF2IRD1-203ENST00000455841 LRRCC1Q9C099 1032 aa18.84■□□□□ 0.61
GTF2IRD1-203ENST00000455841 PIP4K2BP78356 416 aa18.84■□□□□ 0.61
GTF2IRD1-203ENST00000455841 NUTM2BA6NNL0 878 aaPredicted RBP18.83■□□□□ 0.61
GTF2IRD1-203ENST00000455841 NUTM2EB1AL46 878 aaPredicted RBP18.83■□□□□ 0.61
GTF2IRD1-203ENST00000455841 CYP27B1O15528 508 aa18.83■□□□□ 0.61
GTF2IRD1-203ENST00000455841 ZNF790Q6PG37 636 aa18.83■□□□□ 0.61
GTF2IRD1-203ENST00000455841 NUTM2AQ8IVF1 878 aaPredicted RBP18.83■□□□□ 0.61
GTF2IRD1-203ENST00000455841 MST1RQ04912 1400 aa18.83■□□□□ 0.6
GTF2IRD1-203ENST00000455841 KLHDC4Q8TBB5 520 aa18.83■□□□□ 0.6
GTF2IRD1-203ENST00000455841 LARP1Q6PKG0 1096 aaKnown RBP18.82■□□□□ 0.6
GTF2IRD1-203ENST00000455841 COPS6Q7L5N1 327 aa18.82■□□□□ 0.6
GTF2IRD1-203ENST00000455841 XAGE3Q8WTP9 111 aa18.82■□□□□ 0.6
GTF2IRD1-203ENST00000455841 KIF24Q5T7B8 1368 aa18.82■□□□□ 0.6
GTF2IRD1-203ENST00000455841 PHKG2P15735 406 aa18.82■□□□□ 0.6
GTF2IRD1-203ENST00000455841 TTC22Q5TAA0 569 aa18.82■□□□□ 0.6
GTF2IRD1-203ENST00000455841 SPATA31A3Q5VYP0 1347 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms