RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 TESPA1A2RU30 521 aaPredicted RBP8.42□□□□□ -1.06
SBDSP1-204ENST00000453858 DPYSL4O14531 572 aa8.42□□□□□ -1.06
SBDSP1-204ENST00000453858 PDIA6Q15084 440 aa8.42□□□□□ -1.06
SBDSP1-204ENST00000453858 PMFBP1Q8TBY8 1022 aa8.42□□□□□ -1.06
SBDSP1-204ENST00000453858 CD2APQ9Y5K6 639 aa8.42□□□□□ -1.06
SBDSP1-204ENST00000453858 SSH2Q76I76 1423 aa8.42□□□□□ -1.06
SBDSP1-204ENST00000453858 PARP4Q9UKK3 1724 aaKnown RBP8.42□□□□□ -1.06
SBDSP1-204ENST00000453858 MKI67P46013 3256 aaKnown RBP8.42□□□□□ -1.06
SBDSP1-204ENST00000453858 PNPLA7Q6ZV29 1317 aa8.41□□□□□ -1.06
SBDSP1-204ENST00000453858 ZNF316A6NFI3 1004 aaPredicted RBP8.41□□□□□ -1.06
SBDSP1-204ENST00000453858 GPR153Q6NV75 609 aa8.4□□□□□ -1.06
SBDSP1-204ENST00000453858 CRYBG1Q9Y4K1 1723 aa8.4□□□□□ -1.07
SBDSP1-204ENST00000453858 CCDC85CA6NKD9 419 aa8.39□□□□□ -1.07
SBDSP1-204ENST00000453858 SEMA3EO15041 775 aa8.39□□□□□ -1.07
SBDSP1-204ENST00000453858 CTCFP49711 727 aaPredicted RBP8.39□□□□□ -1.07
SBDSP1-204ENST00000453858 EVA1CP58658 441 aa8.39□□□□□ -1.07
SBDSP1-204ENST00000453858 TRPM3Q9HCF6 1732 aaPredicted RBP8.39□□□□□ -1.07
SBDSP1-204ENST00000453858 FMN2Q9NZ56 1722 aa8.39□□□□□ -1.07
SBDSP1-204ENST00000453858 E9PCH4 1651 aa8.39□□□□□ -1.07
SBDSP1-204ENST00000453858 ALS2Q96Q42 1657 aa8.39□□□□□ -1.07
SBDSP1-204ENST00000453858 RGPD8O14715 1765 aaPredicted RBP8.38□□□□□ -1.07
SBDSP1-204ENST00000453858 PLEKHH1Q9ULM0 1364 aa8.38□□□□□ -1.07
SBDSP1-204ENST00000453858 ERBB3P21860 1342 aa8.38□□□□□ -1.07
SBDSP1-204ENST00000453858 ZNF326Q5BKZ1 582 aaKnown RBP8.38□□□□□ -1.07
SBDSP1-204ENST00000453858 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.38□□□□□ -1.07
SBDSP1-204ENST00000453858 C10orf71Q711Q0 1435 aa8.37□□□□□ -1.07
SBDSP1-204ENST00000453858 LBX1P52954 281 aa8.37□□□□□ -1.07
SBDSP1-204ENST00000453858 DDB1Q16531 1140 aa8.37□□□□□ -1.07
SBDSP1-204ENST00000453858 ANKRD30AQ9BXX3 1397 aa8.36□□□□□ -1.07
SBDSP1-204ENST00000453858 ZC3H6P61129 1189 aaKnown RBP8.36□□□□□ -1.07
SBDSP1-204ENST00000453858 SMC1BQ8NDV3 1235 aa8.36□□□□□ -1.07
SBDSP1-204ENST00000453858 CHIC2Q9UKJ5 165 aa8.36□□□□□ -1.07
SBDSP1-204ENST00000453858 CICQ96RK0 1608 aaPredicted RBP8.36□□□□□ -1.07
SBDSP1-204ENST00000453858 QSER1Q2KHR3 1735 aa8.35□□□□□ -1.07
SBDSP1-204ENST00000453858 TOPAZ1Q8N9V7 1692 aa8.35□□□□□ -1.07
SBDSP1-204ENST00000453858 C16orf71Q8IYS4 520 aaPredicted RBP8.35□□□□□ -1.07
SBDSP1-204ENST00000453858 WBP1LQ9NX94 342 aa8.35□□□□□ -1.07
SBDSP1-204ENST00000453858 DAPK1P53355 1430 aa8.35□□□□□ -1.07
SBDSP1-204ENST00000453858 PXDNLA1KZ92 1463 aa8.34□□□□□ -1.07
SBDSP1-204ENST00000453858 EVI5O60447 810 aa8.34□□□□□ -1.07
SBDSP1-204ENST00000453858 PRPF38BQ5VTL8 546 aaKnown RBP8.34□□□□□ -1.07
SBDSP1-204ENST00000453858 ZNF687Q8N1G0 1237 aa8.34□□□□□ -1.07
SBDSP1-204ENST00000453858 ABCC11Q96J66 1382 aa8.34□□□□□ -1.07
SBDSP1-204ENST00000453858 UNC80Q8N2C7 3258 aa8.34□□□□□ -1.08
SBDSP1-204ENST00000453858 VARS2Q5ST30 1063 aaKnown RBP8.33□□□□□ -1.08
SBDSP1-204ENST00000453858 RRAGCQ9HB90 399 aa8.33□□□□□ -1.08
SBDSP1-204ENST00000453858 PCDHGA4Q9Y5G9 962 aa8.33□□□□□ -1.08
SBDSP1-204ENST00000453858 LRRC37A3O60309 1634 aa8.32□□□□□ -1.08
SBDSP1-204ENST00000453858 IGSF1Q8N6C5 1336 aa8.32□□□□□ -1.08
SBDSP1-204ENST00000453858 ACIN1Q9UKV3 1341 aaKnown RBP8.32□□□□□ -1.08
SBDSP1-204ENST00000453858 ANKRD50Q9ULJ7 1429 aa8.32□□□□□ -1.08
SBDSP1-204ENST00000453858 HSPA8P11142 646 aaKnown RBP8.32□□□□□ -1.08
SBDSP1-204ENST00000453858 VCANP13611 3396 aa8.32□□□□□ -1.08
SBDSP1-204ENST00000453858 RANBP2P49792 3224 aaKnown RBP8.32□□□□□ -1.08
SBDSP1-204ENST00000453858 BRD4O60885 1362 aaPredicted RBP8.32□□□□□ -1.08
SBDSP1-204ENST00000453858 LMO7Q8WWI1 1683 aa8.31□□□□□ -1.08
SBDSP1-204ENST00000453858 DLL1O00548 723 aa8.31□□□□□ -1.08
SBDSP1-204ENST00000453858 TPRNQ4KMQ1 711 aa8.31□□□□□ -1.08
SBDSP1-204ENST00000453858 COL23A1Q86Y22 540 aaPredicted RBP8.31□□□□□ -1.08
SBDSP1-204ENST00000453858 SIRT1Q96EB6 747 aa8.31□□□□□ -1.08
SBDSP1-204ENST00000453858 STK26Q9P289 416 aa8.31□□□□□ -1.08
SBDSP1-204ENST00000453858 CPDO75976 1380 aa8.31□□□□□ -1.08
SBDSP1-204ENST00000453858 CLTCL1P53675 1640 aa8.3□□□□□ -1.08
SBDSP1-204ENST00000453858 TFCP2L1Q9NZI6 479 aa8.3□□□□□ -1.08
SBDSP1-204ENST00000453858 MKRN1Q9UHC7 482 aaKnown RBP8.3□□□□□ -1.08
SBDSP1-204ENST00000453858 BRCA2P51587 3418 aa8.3□□□□□ -1.08
SBDSP1-204ENST00000453858 CRB1P82279 1406 aa8.29□□□□□ -1.08
SBDSP1-204ENST00000453858 MLLT3P42568 568 aaPredicted RBP8.29□□□□□ -1.08
SBDSP1-204ENST00000453858 ARSIQ5FYB1 569 aa8.29□□□□□ -1.08
SBDSP1-204ENST00000453858 SLC27A3Q5K4L6 730 aa8.29□□□□□ -1.08
SBDSP1-204ENST00000453858 EPAS1Q99814 870 aa8.29□□□□□ -1.08
SBDSP1-204ENST00000453858 COL5A2P05997 1499 aaPredicted RBP8.29□□□□□ -1.08
SBDSP1-204ENST00000453858 TUBGCP6Q96RT7 1819 aa8.29□□□□□ -1.08
SBDSP1-204ENST00000453858 KCPQ6ZWJ8 1503 aa8.29□□□□□ -1.08
SBDSP1-204ENST00000453858 GPRASP1Q5JY77 1395 aa8.28□□□□□ -1.08
SBDSP1-204ENST00000453858 MSL1Q68DK7 614 aa8.28□□□□□ -1.08
SBDSP1-204ENST00000453858 CNTNAP1P78357 1384 aa8.27□□□□□ -1.09
SBDSP1-204ENST00000453858 PHF14O94880 888 aa8.27□□□□□ -1.09
SBDSP1-204ENST00000453858 KANK4Q5T7N3 995 aaPredicted RBP8.27□□□□□ -1.09
SBDSP1-204ENST00000453858 C9orf131Q5VYM1 1079 aa8.27□□□□□ -1.09
SBDSP1-204ENST00000453858 AIDAQ96BJ3 306 aa8.27□□□□□ -1.09
SBDSP1-204ENST00000453858 HIRIP3Q9BW71 556 aaPredicted RBP8.27□□□□□ -1.09
SBDSP1-204ENST00000453858 SPTBN5Q9NRC6 3674 aaKnown RBP8.27□□□□□ -1.09
SBDSP1-204ENST00000453858 KDM2BQ8NHM5 1336 aa8.27□□□□□ -1.09
SBDSP1-204ENST00000453858 ANKRD30BQ9BXX2 1392 aa8.26□□□□□ -1.09
SBDSP1-204ENST00000453858 GRXCR2A6NFK2 248 aa8.26□□□□□ -1.09
SBDSP1-204ENST00000453858 VEGFBP49765 207 aa8.26□□□□□ -1.09
SBDSP1-204ENST00000453858 KCNQ4P56696 695 aa8.26□□□□□ -1.09
SBDSP1-204ENST00000453858 TMEM132EQ6IEE7 984 aa8.26□□□□□ -1.09
SBDSP1-204ENST00000453858 CDCA7Q9BWT1 371 aaPredicted RBP8.26□□□□□ -1.09
SBDSP1-204ENST00000453858 USP6P35125 1406 aa8.26□□□□□ -1.09
SBDSP1-204ENST00000453858 ANKARQ7Z5J8 1434 aa8.26□□□□□ -1.09
SBDSP1-204ENST00000453858 PITPNM2Q9BZ72 1349 aa8.26□□□□□ -1.09
SBDSP1-204ENST00000453858 PRR36Q9H6K5 1346 aa8.26□□□□□ -1.09
SBDSP1-204ENST00000453858 NHSQ6T4R5 1651 aa8.25□□□□□ -1.09
SBDSP1-204ENST00000453858 ARHGAP27Q6ZUM4 889 aa8.25□□□□□ -1.09
SBDSP1-204ENST00000453858 FBXW7Q969H0 707 aa8.25□□□□□ -1.09
SBDSP1-204ENST00000453858 ACSBG1Q96GR2 724 aa8.25□□□□□ -1.09
SBDSP1-204ENST00000453858 RPGRIP1LQ68CZ1 1315 aa8.25□□□□□ -1.09
SBDSP1-204ENST00000453858 IFT172Q9UG01 1749 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms