RNA–Protein interactions for RNA: ENST00000453163.6

PDCD2-204, Transcript of programmed cell death 2, humanhuman

TSL 1 (best) BASIC

Gene PDCD2, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-204ENST00000453163 APBB1O00213 710 aa25.18■■□□□ 1.62
PDCD2-204ENST00000453163 TBC1D9Q6ZT07 1266 aa25.18■■□□□ 1.62
PDCD2-204ENST00000453163 ZNF530Q6P9A1 599 aaPredicted RBP25.18■■□□□ 1.62
PDCD2-204ENST00000453163 PXDNQ92626 1479 aa25.17■■□□□ 1.62
PDCD2-204ENST00000453163 HDGFL1Q5TGJ6 251 aa25.17■■□□□ 1.62
PDCD2-204ENST00000453163 OTUD7AQ8TE49 926 aaPredicted RBP25.17■■□□□ 1.62
PDCD2-204ENST00000453163 ANKRD24Q8TF21 1146 aa25.17■■□□□ 1.62
PDCD2-204ENST00000453163 STRCP1A6NGW2 1772 aa25.17■■□□□ 1.62
PDCD2-204ENST00000453163 SMARCA5O60264 1052 aaPredicted RBP25.17■■□□□ 1.62
PDCD2-204ENST00000453163 NCAPD2Q15021 1401 aa25.17■■□□□ 1.62
PDCD2-204ENST00000453163 RBM25P49756 843 aaKnown RBP25.16■■□□□ 1.62
PDCD2-204ENST00000453163 AXIN2Q9Y2T1 843 aa25.16■■□□□ 1.62
PDCD2-204ENST00000453163 ALS2Q96Q42 1657 aa25.16■■□□□ 1.62
PDCD2-204ENST00000453163 FRAT2O75474 233 aaPredicted RBP25.16■■□□□ 1.62
PDCD2-204ENST00000453163 CAMTA1Q9Y6Y1 1673 aa25.15■■□□□ 1.62
PDCD2-204ENST00000453163 AKAP4Q5JQC9 854 aa25.15■■□□□ 1.62
PDCD2-204ENST00000453163 PLEKHO1Q53GL0 409 aaPredicted RBP25.14■■□□□ 1.62
PDCD2-204ENST00000453163 MPRIPQ6WCQ1 1025 aa25.14■■□□□ 1.62
PDCD2-204ENST00000453163 ANTXR1Q9H6X2 564 aa25.14■■□□□ 1.62
PDCD2-204ENST00000453163 GNAI2P04899 355 aa25.14■■□□□ 1.61
PDCD2-204ENST00000453163 HMMRO75330 724 aa25.13■■□□□ 1.61
PDCD2-204ENST00000453163 EIF4A1P60842 406 aaKnown RBP25.13■■□□□ 1.61
PDCD2-204ENST00000453163 TTC22Q5TAA0 569 aa25.13■■□□□ 1.61
PDCD2-204ENST00000453163 KCNQ3O43525 872 aa25.13■■□□□ 1.61
PDCD2-204ENST00000453163 PHAXQ9H814 394 aaKnown RBP25.13■■□□□ 1.61
PDCD2-204ENST00000453163 TMEM94Q12767 1356 aa25.13■■□□□ 1.61
PDCD2-204ENST00000453163 CDC45O75419 566 aa25.12■■□□□ 1.61
PDCD2-204ENST00000453163 MST1RQ04912 1400 aa25.12■■□□□ 1.61
PDCD2-204ENST00000453163 TEFQ10587 303 aa25.12■■□□□ 1.61
PDCD2-204ENST00000453163 EIF2S2P20042 333 aaKnown RBP25.11■■□□□ 1.61
PDCD2-204ENST00000453163 SPRYD3Q8NCJ5 442 aa25.11■■□□□ 1.61
PDCD2-204ENST00000453163 PXDNLA1KZ92 1463 aa25.11■■□□□ 1.61
PDCD2-204ENST00000453163 AMOTQ4VCS5 1084 aa25.11■■□□□ 1.61
PDCD2-204ENST00000453163 DDX17Q92841 729 aaKnown RBP25.11■■□□□ 1.61
PDCD2-204ENST00000453163 BRPF3Q9ULD4 1205 aa25.1■■□□□ 1.61
PDCD2-204ENST00000453163 ATF3P18847 181 aa25.09■■□□□ 1.61
PDCD2-204ENST00000453163 ZC3H6P61129 1189 aaKnown RBP25.09■■□□□ 1.61
PDCD2-204ENST00000453163 BTBD11A6QL63 1104 aa25.09■■□□□ 1.61
PDCD2-204ENST00000453163 GNAI3P08754 354 aa25.09■■□□□ 1.61
PDCD2-204ENST00000453163 C1orf141Q5JVX7 400 aa25.09■■□□□ 1.61
PDCD2-204ENST00000453163 RNMTO43148 476 aaKnown RBP25.08■■□□□ 1.6
PDCD2-204ENST00000453163 CHPF2Q9P2E5 772 aa25.07■■□□□ 1.6
PDCD2-204ENST00000453163 EXOC6BQ9Y2D4 811 aa25.07■■□□□ 1.6
PDCD2-204ENST00000453163 ERBB3P21860 1342 aa25.07■■□□□ 1.6
PDCD2-204ENST00000453163 PNMA6EA0A0J9YXQ4 647 aa25.06■■□□□ 1.6
PDCD2-204ENST00000453163 KIF2CQ99661 725 aa25.06■■□□□ 1.6
PDCD2-204ENST00000453163 HOXB7P09629 217 aa25.06■■□□□ 1.6
PDCD2-204ENST00000453163 HSCBQ8IWL3 235 aa25.06■■□□□ 1.6
PDCD2-204ENST00000453163 LRRFIP2Q9Y608 721 aaKnown RBP25.06■■□□□ 1.6
PDCD2-204ENST00000453163 USP44Q9H0E7 712 aa25.05■■□□□ 1.6
PDCD2-204ENST00000453163 SIPA1L3O60292 1781 aaPredicted RBP25.04■■□□□ 1.6
PDCD2-204ENST00000453163 DCCP43146 1447 aa25.04■■□□□ 1.6
PDCD2-204ENST00000453163 OVOS2A0A0G2JMS6 1433 aa25.03■■□□□ 1.6
PDCD2-204ENST00000453163 SDSP20132 328 aa25.03■■□□□ 1.6
PDCD2-204ENST00000453163 ANXA1P04083 346 aa25.03■■□□□ 1.6
PDCD2-204ENST00000453163 DNAJC5Q9H3Z4 198 aa25.03■■□□□ 1.6
PDCD2-204ENST00000453163 ATP8B2P98198 1209 aa25.02■■□□□ 1.6
PDCD2-204ENST00000453163 UBTFL1P0CB47 393 aaPredicted RBP25.01■■□□□ 1.59
PDCD2-204ENST00000453163 PRKCSHP14314 528 aaPredicted RBP25.01■■□□□ 1.59
PDCD2-204ENST00000453163 HSPA2P54652 639 aa25■■□□□ 1.59
PDCD2-204ENST00000453163 SNX21Q969T3 373 aa25■■□□□ 1.59
PDCD2-204ENST00000453163 CRYBG1Q9Y4K1 1723 aa25■■□□□ 1.59
PDCD2-204ENST00000453163 SRCIN1Q9C0H9 1055 aa24.99■■□□□ 1.59
PDCD2-204ENST00000453163 ADAMTS7Q9UKP4 1686 aa24.99■■□□□ 1.59
PDCD2-204ENST00000453163 PDE1AP54750 535 aa24.99■■□□□ 1.59
PDCD2-204ENST00000453163 COL18A1P39060 1754 aa24.99■■□□□ 1.59
PDCD2-204ENST00000453163 PI4KAP2A4QPH2 592 aa24.99■■□□□ 1.59
PDCD2-204ENST00000453163 PI4KAP1Q8N8J0 262 aa24.99■■□□□ 1.59
PDCD2-204ENST00000453163 CABLES1Q8TDN4 633 aa24.99■■□□□ 1.59
PDCD2-204ENST00000453163 LRRCC1Q9C099 1032 aa24.98■■□□□ 1.59
PDCD2-204ENST00000453163 IBTKQ9P2D0 1353 aaPredicted RBP24.98■■□□□ 1.59
PDCD2-204ENST00000453163 OSBPL3Q9H4L5 887 aa24.98■■□□□ 1.59
PDCD2-204ENST00000453163 TUBGCP6Q96RT7 1819 aa24.97■■□□□ 1.59
PDCD2-204ENST00000453163 TSHZ3Q63HK5 1081 aa24.97■■□□□ 1.59
PDCD2-204ENST00000453163 DNAAF4Q8WXU2 420 aa24.97■■□□□ 1.59
PDCD2-204ENST00000453163 RBM42Q9BTD8 480 aaKnown RBP24.97■■□□□ 1.59
PDCD2-204ENST00000453163 NLRP2Q9NX02 1062 aa24.97■■□□□ 1.59
PDCD2-204ENST00000453163 NCOA3Q9Y6Q9 1424 aa24.97■■□□□ 1.59
PDCD2-204ENST00000453163 CD2BP2O95400 341 aaKnown RBP24.97■■□□□ 1.59
PDCD2-204ENST00000453163 PRAMEF22A3QJZ6 481 aa24.96■■□□□ 1.59
PDCD2-204ENST00000453163 GIGYF1O75420 1035 aaPredicted RBP24.96■■□□□ 1.59
PDCD2-204ENST00000453163 CADPS2Q86UW7 1296 aa24.96■■□□□ 1.59
PDCD2-204ENST00000453163 CHMP4AQ9BY43 222 aa24.96■■□□□ 1.59
PDCD2-204ENST00000453163 NPHP3Q7Z494 1330 aa24.96■■□□□ 1.59
PDCD2-204ENST00000453163 SALL3Q9BXA9 1300 aa24.96■■□□□ 1.59
PDCD2-204ENST00000453163 ADCY9O60503 1353 aa24.96■■□□□ 1.59
PDCD2-204ENST00000453163 TNS3Q68CZ2 1445 aa24.96■■□□□ 1.59
PDCD2-204ENST00000453163 HEG1Q9ULI3 1381 aa24.95■■□□□ 1.59
PDCD2-204ENST00000453163 BEND3Q5T5X7 828 aa24.95■■□□□ 1.58
PDCD2-204ENST00000453163 RAPGEF4Q8WZA2 1011 aa24.95■■□□□ 1.58
PDCD2-204ENST00000453163 LMTK3Q96Q04 1460 aa24.95■■□□□ 1.58
PDCD2-204ENST00000453163 DBF4Q9UBU7 674 aaPredicted RBP24.95■■□□□ 1.58
PDCD2-204ENST00000453163 NBPF7P0C2Y1 421 aaPredicted RBP24.94■■□□□ 1.58
PDCD2-204ENST00000453163 SCN11AQ9UI33 1791 aa24.94■■□□□ 1.58
PDCD2-204ENST00000453163 XIRP1Q702N8 1843 aaKnown RBP24.94■■□□□ 1.58
PDCD2-204ENST00000453163 MEGF6O75095 1541 aa24.94■■□□□ 1.58
PDCD2-204ENST00000453163 PROSER3Q2NL68 480 aa24.94■■□□□ 1.58
PDCD2-204ENST00000453163 CHMP5Q9NZZ3 219 aa24.93■■□□□ 1.58
PDCD2-204ENST00000453163 CHRNA2Q15822 529 aa24.93■■□□□ 1.58
PDCD2-204ENST00000453163 CASC1Q6TDU7 716 aa24.93■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms