RNA–Protein interactions for RNA: ENST00000453091.6

RIF1-206, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 8,053 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-206ENST00000453091 AMOTL2Q9Y2J4 779 aa9.14□□□□□ -0.95
RIF1-206ENST00000453091 CCDC144CPQ8IYA2 1237 aa9.14□□□□□ -0.95
RIF1-206ENST00000453091 TSPYL1Q9H0U9 437 aa9.14□□□□□ -0.95
RIF1-206ENST00000453091 ZSWIM4Q9H7M6 989 aa9.14□□□□□ -0.95
RIF1-206ENST00000453091 TTC12Q9H892 705 aaPredicted RBP9.14□□□□□ -0.95
RIF1-206ENST00000453091 IFT140Q96RY7 1462 aa9.14□□□□□ -0.95
RIF1-206ENST00000453091 TOP2BQ02880 1626 aa9.14□□□□□ -0.95
RIF1-206ENST00000453091 CAMSAP2Q08AD1 1489 aa9.14□□□□□ -0.95
RIF1-206ENST00000453091 DNA2P51530 1060 aa9.14□□□□□ -0.95
RIF1-206ENST00000453091 KIF6Q6ZMV9 814 aa9.14□□□□□ -0.95
RIF1-206ENST00000453091 MEIS3Q99687 375 aa9.14□□□□□ -0.95
RIF1-206ENST00000453091 PRIM1P49642 420 aaKnown RBP9.14□□□□□ -0.95
RIF1-206ENST00000453091 LRRFIP1Q32MZ4 808 aaKnown RBP9.14□□□□□ -0.95
RIF1-206ENST00000453091 TMX3Q96JJ7 454 aa9.14□□□□□ -0.95
RIF1-206ENST00000453091 URI1O94763 535 aaPredicted RBP9.14□□□□□ -0.95
RIF1-206ENST00000453091 IKQ13123 557 aaPredicted RBP9.14□□□□□ -0.95
RIF1-206ENST00000453091 CCDC183Q5T5S1 534 aa9.14□□□□□ -0.95
RIF1-206ENST00000453091 TTC22Q5TAA0 569 aa9.14□□□□□ -0.95
RIF1-206ENST00000453091 UBE2Q2Q8WVN8 375 aa9.14□□□□□ -0.95
RIF1-206ENST00000453091 PLCD4Q9BRC7 762 aa9.14□□□□□ -0.95
RIF1-206ENST00000453091 WWC3Q9ULE0 1092 aa9.14□□□□□ -0.95
RIF1-206ENST00000453091 CENPHQ9H3R5 247 aa9.13□□□□□ -0.95
RIF1-206ENST00000453091 ZBTB3Q9H5J0 574 aa9.13□□□□□ -0.95
RIF1-206ENST00000453091 SNRKQ9NRH2 765 aa9.13□□□□□ -0.95
RIF1-206ENST00000453091 SDSP20132 328 aa9.13□□□□□ -0.95
RIF1-206ENST00000453091 GPTP24298 496 aa9.13□□□□□ -0.95
RIF1-206ENST00000453091 KLHL10Q6JEL2 608 aa9.13□□□□□ -0.95
RIF1-206ENST00000453091 CCDC66A2RUB6 948 aa9.13□□□□□ -0.95
RIF1-206ENST00000453091 CFAP100Q494V2 611 aa9.13□□□□□ -0.95
RIF1-206ENST00000453091 PRDM11Q9NQV5 511 aa9.13□□□□□ -0.95
RIF1-206ENST00000453091 CPA1P15085 419 aa9.13□□□□□ -0.95
RIF1-206ENST00000453091 PDCP20941 246 aa9.13□□□□□ -0.95
RIF1-206ENST00000453091 ZHX3Q9H4I2 956 aa9.13□□□□□ -0.95
RIF1-206ENST00000453091 RAB11FIP3O75154 756 aa9.13□□□□□ -0.95
RIF1-206ENST00000453091 DHX8Q14562 1220 aaKnown RBP9.13□□□□□ -0.95
RIF1-206ENST00000453091 CCDC158Q5M9N0 1113 aa9.13□□□□□ -0.95
RIF1-206ENST00000453091 CEP57L1Q8IYX8 460 aa9.13□□□□□ -0.95
RIF1-206ENST00000453091 GTF2F1P35269 517 aaKnown RBP eCLIP9.13□□□□□ -0.95
RIF1-206ENST00000453091 GNAT3A8MTJ3 354 aa9.12□□□□□ -0.95
RIF1-206ENST00000453091 C8orf58Q8NAV2 365 aa9.12□□□□□ -0.95
RIF1-206ENST00000453091 OTUD7AQ8TE49 926 aaPredicted RBP9.12□□□□□ -0.95
RIF1-206ENST00000453091 PPP6R1Q9UPN7 881 aa9.12□□□□□ -0.95
RIF1-206ENST00000453091 LEKR1Q6ZMV7 388 aa9.12□□□□□ -0.95
RIF1-206ENST00000453091 PPFIBP1Q86W92 1011 aa9.12□□□□□ -0.95
RIF1-206ENST00000453091 ERC1Q8IUD2 1116 aa9.12□□□□□ -0.95
RIF1-206ENST00000453091 IDH1O75874 414 aaKnown RBP9.12□□□□□ -0.95
RIF1-206ENST00000453091 CT47B1P0C2W7 299 aaPredicted RBP9.12□□□□□ -0.95
RIF1-206ENST00000453091 SLC39A6Q13433 755 aa9.12□□□□□ -0.95
RIF1-206ENST00000453091 USP48Q86UV5 1035 aa9.12□□□□□ -0.95
RIF1-206ENST00000453091 CABLES1Q8TDN4 633 aa9.12□□□□□ -0.95
RIF1-206ENST00000453091 ZSCAN31Q96LW9 406 aaPredicted RBP9.12□□□□□ -0.95
RIF1-206ENST00000453091 TANGO6Q9C0B7 1094 aa9.12□□□□□ -0.95
RIF1-206ENST00000453091 HAND2P61296 217 aa9.12□□□□□ -0.95
RIF1-206ENST00000453091 HSP90AB2PQ58FF8 381 aa9.12□□□□□ -0.95
RIF1-206ENST00000453091 AEBP2Q6ZN18 517 aaPredicted RBP9.12□□□□□ -0.95
RIF1-206ENST00000453091 THEMISQ8N1K5 641 aaPredicted RBP9.12□□□□□ -0.95
RIF1-206ENST00000453091 CHAMP1Q96JM3 812 aa9.12□□□□□ -0.95
RIF1-206ENST00000453091 CTDP1Q9Y5B0 961 aaPredicted RBP9.12□□□□□ -0.95
RIF1-206ENST00000453091 CCDC69A6NI79 296 aa9.12□□□□□ -0.95
RIF1-206ENST00000453091 NUCB1Q02818 461 aa9.12□□□□□ -0.95
RIF1-206ENST00000453091 LRRC59Q96AG4 307 aaKnown RBP9.12□□□□□ -0.95
RIF1-206ENST00000453091 TBC1D2BQ9UPU7 963 aa9.12□□□□□ -0.95
RIF1-206ENST00000453091 OFD1O75665 1012 aa9.12□□□□□ -0.95
RIF1-206ENST00000453091 PTPN14Q15678 1187 aa9.11□□□□□ -0.95
RIF1-206ENST00000453091 AMOTL1Q8IY63 956 aa9.11□□□□□ -0.95
RIF1-206ENST00000453091 ACBD3Q9H3P7 528 aa9.11□□□□□ -0.95
RIF1-206ENST00000453091 HSP90AB3PQ58FF7 597 aa9.11□□□□□ -0.95
RIF1-206ENST00000453091 TMC6Q7Z403 805 aa9.11□□□□□ -0.95
RIF1-206ENST00000453091 ZNF692Q9BU19 519 aaPredicted RBP9.11□□□□□ -0.95
RIF1-206ENST00000453091 POLR3DP05423 398 aaPredicted RBP9.11□□□□□ -0.95
RIF1-206ENST00000453091 FILIP1LQ4L180 1135 aa9.11□□□□□ -0.95
RIF1-206ENST00000453091 ATAD2Q6PL18 1390 aa9.11□□□□□ -0.95
RIF1-206ENST00000453091 SRRTQ9BXP5 876 aaKnown RBP9.11□□□□□ -0.95
RIF1-206ENST00000453091 HIP1O00291 1037 aa9.11□□□□□ -0.95
RIF1-206ENST00000453091 ENOX2Q16206 610 aaKnown RBP9.11□□□□□ -0.95
RIF1-206ENST00000453091 ZFYVE27Q5T4F4 411 aa9.11□□□□□ -0.95
RIF1-206ENST00000453091 STAC3Q96MF2 364 aa9.11□□□□□ -0.95
RIF1-206ENST00000453091 RNF216Q9NWF9 866 aaPredicted RBP9.11□□□□□ -0.95
RIF1-206ENST00000453091 CLCN1P35523 988 aa9.1□□□□□ -0.95
RIF1-206ENST00000453091 NOM1Q5C9Z4 860 aaKnown RBP9.1□□□□□ -0.95
RIF1-206ENST00000453091 ANKLE2Q86XL3 938 aa9.1□□□□□ -0.95
RIF1-206ENST00000453091 TSC1Q92574 1164 aa9.1□□□□□ -0.95
RIF1-206ENST00000453091 BRMS1Q9HCU9 246 aa9.1□□□□□ -0.95
RIF1-206ENST00000453091 CCDC61Q9Y6R9 512 aa9.1□□□□□ -0.95
RIF1-206ENST00000453091 MAGI1Q96QZ7 1491 aaPredicted RBP9.1□□□□□ -0.95
RIF1-206ENST00000453091 KLHL40Q2TBA0 621 aa9.1□□□□□ -0.95
RIF1-206ENST00000453091 STX6O43752 255 aa9.1□□□□□ -0.95
RIF1-206ENST00000453091 LIG1P18858 919 aa9.1□□□□□ -0.95
RIF1-206ENST00000453091 RAI14Q9P0K7 980 aa9.1□□□□□ -0.95
RIF1-206ENST00000453091 ALDH1L2Q3SY69 923 aa9.1□□□□□ -0.95
RIF1-206ENST00000453091 MAGEC2Q9UBF1 373 aaPredicted RBP9.1□□□□□ -0.95
RIF1-206ENST00000453091 EPS15P42566 896 aa9.1□□□□□ -0.95
RIF1-206ENST00000453091 CCDC186Q7Z3E2 898 aa9.1□□□□□ -0.95
RIF1-206ENST00000453091 BMP2KLQ5H9B9 411 aa9.09□□□□□ -0.95
RIF1-206ENST00000453091 TAF3Q5VWG9 929 aa9.09□□□□□ -0.95
RIF1-206ENST00000453091 LRSAM1Q6UWE0 723 aa9.09□□□□□ -0.95
RIF1-206ENST00000453091 FSIP1Q8NA03 581 aa9.09□□□□□ -0.95
RIF1-206ENST00000453091 UBXN4Q92575 508 aa9.09□□□□□ -0.95
RIF1-206ENST00000453091 RBSNQ9H1K0 784 aa9.09□□□□□ -0.95
RIF1-206ENST00000453091 PDCL3Q9H2J4 239 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms