RNA–Protein interactions for RNA: ENST00000452564.1

PIKFYVE-207, Transcript of phosphoinositide kinase, FYVE-type zinc finger containing, humanhuman

TSL 2

Gene PIKFYVE, Length 4,214 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIKFYVE-207ENST00000452564 FBLN1P23142 703 aa9.67□□□□□ -0.86
PIKFYVE-207ENST00000452564 HMGB2P26583 209 aaKnown RBP9.67□□□□□ -0.86
PIKFYVE-207ENST00000452564 CSB-PGBD3P0DP91 1061 aa9.66□□□□□ -0.86
PIKFYVE-207ENST00000452564 TGFB2P61812 414 aa9.65□□□□□ -0.86
PIKFYVE-207ENST00000452564 CACNA1SQ13698 1873 aa9.65□□□□□ -0.86
PIKFYVE-207ENST00000452564 KDM3BQ7LBC6 1761 aa9.65□□□□□ -0.86
PIKFYVE-207ENST00000452564 ATG3Q9NT62 314 aa9.65□□□□□ -0.86
PIKFYVE-207ENST00000452564 TFCP2L1Q9NZI6 479 aa9.65□□□□□ -0.86
PIKFYVE-207ENST00000452564 DCAF5Q96JK2 942 aa9.64□□□□□ -0.87
PIKFYVE-207ENST00000452564 HSP90AB2PQ58FF8 381 aa9.64□□□□□ -0.87
PIKFYVE-207ENST00000452564 ZNF646O15015 1829 aaPredicted RBP9.64□□□□□ -0.87
PIKFYVE-207ENST00000452564 PHKG2P15735 406 aa9.64□□□□□ -0.87
PIKFYVE-207ENST00000452564 PRELPP51888 382 aa9.64□□□□□ -0.87
PIKFYVE-207ENST00000452564 CARD11Q9BXL7 1154 aa9.64□□□□□ -0.87
PIKFYVE-207ENST00000452564 COG3Q96JB2 828 aa9.63□□□□□ -0.87
PIKFYVE-207ENST00000452564 ST20-MTHFSA0A0A6YYL1 179 aa9.63□□□□□ -0.87
PIKFYVE-207ENST00000452564 GPR162Q16538 588 aa9.63□□□□□ -0.87
PIKFYVE-207ENST00000452564 LTBP1Q14766 1721 aa9.63□□□□□ -0.87
PIKFYVE-207ENST00000452564 SMARCC1Q92922 1105 aaPredicted RBP9.63□□□□□ -0.87
PIKFYVE-207ENST00000452564 PCNTO95613 3336 aa9.63□□□□□ -0.87
PIKFYVE-207ENST00000452564 ADRA2BP18089 450 aa9.62□□□□□ -0.87
PIKFYVE-207ENST00000452564 ZC3H4Q9UPT8 1303 aaKnown RBP9.62□□□□□ -0.87
PIKFYVE-207ENST00000452564 RBM46Q8TBY0 533 aaKnown RBP9.62□□□□□ -0.87
PIKFYVE-207ENST00000452564 RRS1Q15050 365 aaKnown RBP9.62□□□□□ -0.87
PIKFYVE-207ENST00000452564 TM4SF1P30408 202 aa9.61□□□□□ -0.87
PIKFYVE-207ENST00000452564 DDX54Q8TDD1 881 aaKnown RBP9.61□□□□□ -0.87
PIKFYVE-207ENST00000452564 LOC102724428A0A0B4J2F2 783 aa9.61□□□□□ -0.87
PIKFYVE-207ENST00000452564 GYS1P13807 737 aa9.61□□□□□ -0.87
PIKFYVE-207ENST00000452564 SIK1P57059 783 aa9.61□□□□□ -0.87
PIKFYVE-207ENST00000452564 LRRC37AA6NMS7 1700 aa9.61□□□□□ -0.87
PIKFYVE-207ENST00000452564 APLP1P51693 650 aa9.61□□□□□ -0.87
PIKFYVE-207ENST00000452564 EYA1Q99502 592 aa9.61□□□□□ -0.87
PIKFYVE-207ENST00000452564 POLKQ9UBT6 870 aa9.61□□□□□ -0.87
PIKFYVE-207ENST00000452564 ERVV-2B6SEH9 535 aa9.6□□□□□ -0.87
PIKFYVE-207ENST00000452564 LAMB2P55268 1798 aa9.59□□□□□ -0.87
PIKFYVE-207ENST00000452564 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.59□□□□□ -0.87
PIKFYVE-207ENST00000452564 ZBTB7CA1YPR0 619 aa9.59□□□□□ -0.87
PIKFYVE-207ENST00000452564 USHBP1Q8N6Y0 703 aa9.59□□□□□ -0.87
PIKFYVE-207ENST00000452564 FSTL1Q12841 308 aa9.59□□□□□ -0.87
PIKFYVE-207ENST00000452564 SLX4Q8IY92 1834 aa9.59□□□□□ -0.87
PIKFYVE-207ENST00000452564 POTECB2RU33 542 aa9.58□□□□□ -0.88
PIKFYVE-207ENST00000452564 TATP17735 454 aaPredicted RBP9.58□□□□□ -0.88
PIKFYVE-207ENST00000452564 ASAP1Q9ULH1 1129 aa9.58□□□□□ -0.88
PIKFYVE-207ENST00000452564 INTS5Q6P9B9 1019 aaKnown RBP9.58□□□□□ -0.88
PIKFYVE-207ENST00000452564 SMIM5Q71RC9 77 aa9.58□□□□□ -0.88
PIKFYVE-207ENST00000452564 EMILIN1Q9Y6C2 1016 aa9.58□□□□□ -0.88
PIKFYVE-207ENST00000452564 SOX12O15370 315 aa9.58□□□□□ -0.88
PIKFYVE-207ENST00000452564 TOMM70O94826 608 aa9.58□□□□□ -0.88
PIKFYVE-207ENST00000452564 MSL1Q68DK7 614 aa9.58□□□□□ -0.88
PIKFYVE-207ENST00000452564 USP42Q9H9J4 1324 aaKnown RBP9.57□□□□□ -0.88
PIKFYVE-207ENST00000452564 ANKRD36CQ5JPF3 1778 aa9.57□□□□□ -0.88
PIKFYVE-207ENST00000452564 DDR1Q08345 913 aa9.57□□□□□ -0.88
PIKFYVE-207ENST00000452564 RPS6KA4O75676 772 aa9.57□□□□□ -0.88
PIKFYVE-207ENST00000452564 EIF4A2Q14240 407 aaKnown RBP9.57□□□□□ -0.88
PIKFYVE-207ENST00000452564 TNRC18O15417 2968 aaPredicted RBP9.57□□□□□ -0.88
PIKFYVE-207ENST00000452564 POLRMTO00411 1230 aaKnown RBP9.56□□□□□ -0.88
PIKFYVE-207ENST00000452564 KLRG1Q96E93 195 aa9.56□□□□□ -0.88
PIKFYVE-207ENST00000452564 GGNBP2Q9H3C7 697 aa9.56□□□□□ -0.88
PIKFYVE-207ENST00000452564 DLG5Q8TDM6 1919 aa9.56□□□□□ -0.88
PIKFYVE-207ENST00000452564 ARHGEF1Q92888 912 aaKnown RBP9.56□□□□□ -0.88
PIKFYVE-207ENST00000452564 TRPM7Q96QT4 1865 aa9.55□□□□□ -0.88
PIKFYVE-207ENST00000452564 BCL2L12Q9HB09 334 aa9.55□□□□□ -0.88
PIKFYVE-207ENST00000452564 GPBP1L1Q9HC44 474 aaPredicted RBP9.55□□□□□ -0.88
PIKFYVE-207ENST00000452564 SOS1Q07889 1333 aaPredicted RBP9.55□□□□□ -0.88
PIKFYVE-207ENST00000452564 KAT6BQ8WYB5 2073 aa9.55□□□□□ -0.88
PIKFYVE-207ENST00000452564 COL4A5P29400 1685 aa9.55□□□□□ -0.88
PIKFYVE-207ENST00000452564 AMPHP49418 695 aa9.55□□□□□ -0.88
PIKFYVE-207ENST00000452564 LTBP3Q9NS15 1303 aa9.54□□□□□ -0.88
PIKFYVE-207ENST00000452564 IFNL2Q8IZJ0 200 aa9.54□□□□□ -0.88
PIKFYVE-207ENST00000452564 RAPGEF4Q8WZA2 1011 aa9.54□□□□□ -0.88
PIKFYVE-207ENST00000452564 TIMELESSQ9UNS1 1208 aa9.54□□□□□ -0.88
PIKFYVE-207ENST00000452564 SPG7Q9UQ90 795 aa9.54□□□□□ -0.88
PIKFYVE-207ENST00000452564 RIC1Q4ADV7 1423 aa9.53□□□□□ -0.88
PIKFYVE-207ENST00000452564 DPEP1P16444 411 aa9.53□□□□□ -0.88
PIKFYVE-207ENST00000452564 NUP98P52948 1817 aa9.53□□□□□ -0.88
PIKFYVE-207ENST00000452564 PSME4Q14997 1843 aa9.53□□□□□ -0.88
PIKFYVE-207ENST00000452564 MMP10P09238 476 aa9.53□□□□□ -0.88
PIKFYVE-207ENST00000452564 CARMIL3Q8ND23 1372 aa9.53□□□□□ -0.88
PIKFYVE-207ENST00000452564 TMF1P82094 1093 aa9.52□□□□□ -0.88
PIKFYVE-207ENST00000452564 NLGN1Q8N2Q7 840 aa9.52□□□□□ -0.88
PIKFYVE-207ENST00000452564 TMC1Q8TDI8 760 aa9.52□□□□□ -0.88
PIKFYVE-207ENST00000452564 AK7Q96M32 723 aa9.52□□□□□ -0.88
PIKFYVE-207ENST00000452564 PASKQ96RG2 1323 aa9.52□□□□□ -0.89
PIKFYVE-207ENST00000452564 IL13P35225 146 aa9.52□□□□□ -0.89
PIKFYVE-207ENST00000452564 MPRIPQ6WCQ1 1025 aa9.52□□□□□ -0.89
PIKFYVE-207ENST00000452564 LTV1Q96GA3 475 aaPredicted RBP9.52□□□□□ -0.89
PIKFYVE-207ENST00000452564 CEMIPQ8WUJ3 1361 aa9.51□□□□□ -0.89
PIKFYVE-207ENST00000452564 NPC1L1Q9UHC9 1359 aa9.51□□□□□ -0.89
PIKFYVE-207ENST00000452564 NMRK2Q9NPI5 230 aa9.51□□□□□ -0.89
PIKFYVE-207ENST00000452564 BRCA2P51587 3418 aa9.51□□□□□ -0.89
PIKFYVE-207ENST00000452564 KLRG2A4D1S0 409 aaPredicted RBP9.5□□□□□ -0.89
PIKFYVE-207ENST00000452564 DDX60Q8IY21 1712 aaKnown RBP9.5□□□□□ -0.89
PIKFYVE-207ENST00000452564 A0A0G2JLW4 131 aa9.5□□□□□ -0.89
PIKFYVE-207ENST00000452564 RGL2O15211 777 aa9.49□□□□□ -0.89
PIKFYVE-207ENST00000452564 GNPATO15228 680 aa9.49□□□□□ -0.89
PIKFYVE-207ENST00000452564 TMOD3Q9NYL9 352 aa9.49□□□□□ -0.89
PIKFYVE-207ENST00000452564 CLSPNQ9HAW4 1339 aa9.49□□□□□ -0.89
PIKFYVE-207ENST00000452564 CYP19A1P11511 503 aaPredicted RBP9.49□□□□□ -0.89
PIKFYVE-207ENST00000452564 ATP6V1AP38606 617 aa9.49□□□□□ -0.89
PIKFYVE-207ENST00000452564 COL13A1Q5TAT6 717 aaPredicted RBP9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms