RNA–Protein interactions for RNA: ENST00000450686.1

LINC01004-202, Transcript of long intergenic non-protein coding RNA 1004, humanhuman

TSL 3 BASIC

Gene LINC01004, Length 538 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01004-202ENST00000450686 PIGBQ92521 554 aa14.11□□□□□ -0.15
LINC01004-202ENST00000450686 PCGF6Q9BYE7 350 aa14.11□□□□□ -0.15
LINC01004-202ENST00000450686 EYA1Q99502 592 aa14.1□□□□□ -0.15
LINC01004-202ENST00000450686 NCAPD2Q15021 1401 aa14.09□□□□□ -0.15
LINC01004-202ENST00000450686 C1QTNF8P60827 252 aa14.09□□□□□ -0.15
LINC01004-202ENST00000450686 CDCA8Q53HL2 280 aa14.09□□□□□ -0.15
LINC01004-202ENST00000450686 LINC00116Q8NCU8 138 aa14.09□□□□□ -0.15
LINC01004-202ENST00000450686 AK7Q96M32 723 aa14.08□□□□□ -0.16
LINC01004-202ENST00000450686 POLKQ9UBT6 870 aa14.08□□□□□ -0.16
LINC01004-202ENST00000450686 ASAP1Q9ULH1 1129 aa14.08□□□□□ -0.16
LINC01004-202ENST00000450686 KIF24Q5T7B8 1368 aa14.08□□□□□ -0.16
LINC01004-202ENST00000450686 SPDYE4A6NLX3 237 aa14.07□□□□□ -0.16
LINC01004-202ENST00000450686 ITPK1Q13572 414 aa14.07□□□□□ -0.16
LINC01004-202ENST00000450686 WASHC2AQ641Q2 1341 aa14.07□□□□□ -0.16
LINC01004-202ENST00000450686 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.06□□□□□ -0.16
LINC01004-202ENST00000450686 EIF4A2Q14240 407 aaKnown RBP14.06□□□□□ -0.16
LINC01004-202ENST00000450686 LOC102724428A0A0B4J2F2 783 aa14.05□□□□□ -0.16
LINC01004-202ENST00000450686 GIGYF1O75420 1035 aaPredicted RBP14.05□□□□□ -0.16
LINC01004-202ENST00000450686 SIK1P57059 783 aa14.05□□□□□ -0.16
LINC01004-202ENST00000450686 TMOD3Q9NYL9 352 aa14.05□□□□□ -0.16
LINC01004-202ENST00000450686 SPG7Q9UQ90 795 aa14.05□□□□□ -0.16
LINC01004-202ENST00000450686 PHKG2P15735 406 aa14.04□□□□□ -0.16
LINC01004-202ENST00000450686 NKX1-1Q15270 411 aaPredicted RBP14.04□□□□□ -0.16
LINC01004-202ENST00000450686 ZNF526Q8TF50 670 aaPredicted RBP14.04□□□□□ -0.16
LINC01004-202ENST00000450686 SMARCC1Q92922 1105 aaPredicted RBP14.04□□□□□ -0.16
LINC01004-202ENST00000450686 ATP10DQ9P241 1426 aa14.04□□□□□ -0.16
LINC01004-202ENST00000450686 GNPATO15228 680 aa14.03□□□□□ -0.16
LINC01004-202ENST00000450686 HSPA5P11021 654 aaKnown RBP14.03□□□□□ -0.16
LINC01004-202ENST00000450686 ATG3Q9NT62 314 aa14.03□□□□□ -0.16
LINC01004-202ENST00000450686 IGSF1Q8N6C5 1336 aa14.02□□□□□ -0.17
LINC01004-202ENST00000450686 ATP6V1AP38606 617 aa14.02□□□□□ -0.17
LINC01004-202ENST00000450686 FLAD1Q8NFF5 587 aa14.02□□□□□ -0.17
LINC01004-202ENST00000450686 SLC4A9Q96Q91 983 aa14.02□□□□□ -0.17
LINC01004-202ENST00000450686 GRIN3BO60391 1043 aa14.01□□□□□ -0.17
LINC01004-202ENST00000450686 AEBP1Q8IUX7 1158 aa14.01□□□□□ -0.17
LINC01004-202ENST00000450686 IFNL2Q8IZJ0 200 aa14.01□□□□□ -0.17
LINC01004-202ENST00000450686 PANK3Q9H999 370 aa14.01□□□□□ -0.17
LINC01004-202ENST00000450686 CD2APQ9Y5K6 639 aa14.01□□□□□ -0.17
LINC01004-202ENST00000450686 N4BP2Q86UW6 1770 aaPredicted RBP14.01□□□□□ -0.17
LINC01004-202ENST00000450686 KDM6AO15550 1401 aaPredicted RBP13.99□□□□□ -0.17
LINC01004-202ENST00000450686 KDRP35968 1356 aa13.99□□□□□ -0.17
LINC01004-202ENST00000450686 COL5A3P25940 1745 aaPredicted RBP13.99□□□□□ -0.17
LINC01004-202ENST00000450686 KIAA1551Q9HCM1 1747 aa13.99□□□□□ -0.17
LINC01004-202ENST00000450686 SSFA2P28290 1259 aa13.99□□□□□ -0.17
LINC01004-202ENST00000450686 CICQ96RK0 1608 aaPredicted RBP13.99□□□□□ -0.17
LINC01004-202ENST00000450686 MYH14Q7Z406 1995 aaKnown RBP13.99□□□□□ -0.17
LINC01004-202ENST00000450686 MMP10P09238 476 aa13.98□□□□□ -0.17
LINC01004-202ENST00000450686 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.98□□□□□ -0.17
LINC01004-202ENST00000450686 ZNF530Q6P9A1 599 aaPredicted RBP13.97□□□□□ -0.17
LINC01004-202ENST00000450686 REM2Q8IYK8 340 aaPredicted RBP13.97□□□□□ -0.17
LINC01004-202ENST00000450686 C4AP0C0L4 1744 aa13.97□□□□□ -0.17
LINC01004-202ENST00000450686 PXDNLA1KZ92 1463 aa13.96□□□□□ -0.17
LINC01004-202ENST00000450686 FKBP8Q14318 412 aa13.96□□□□□ -0.17
LINC01004-202ENST00000450686 ADCY9O60503 1353 aa13.96□□□□□ -0.18
LINC01004-202ENST00000450686 EIF4G2P78344 907 aaKnown RBP eCLIP13.95□□□□□ -0.18
LINC01004-202ENST00000450686 KIF13BQ9NQT8 1826 aa13.94□□□□□ -0.18
LINC01004-202ENST00000450686 A0A0G2JLW4 131 aa13.94□□□□□ -0.18
LINC01004-202ENST00000450686 PTCD1O75127 700 aaKnown RBP13.94□□□□□ -0.18
LINC01004-202ENST00000450686 TJP1Q07157 1748 aa13.94□□□□□ -0.18
LINC01004-202ENST00000450686 MORC1Q86VD1 984 aa13.94□□□□□ -0.18
LINC01004-202ENST00000450686 GPBP1L1Q9HC44 474 aaPredicted RBP13.94□□□□□ -0.18
LINC01004-202ENST00000450686 TIMELESSQ9UNS1 1208 aa13.94□□□□□ -0.18
LINC01004-202ENST00000450686 CABP4P57796 275 aa13.93□□□□□ -0.18
LINC01004-202ENST00000450686 PLEKHO1Q53GL0 409 aaPredicted RBP13.93□□□□□ -0.18
LINC01004-202ENST00000450686 ARHGEF1Q92888 912 aaKnown RBP13.93□□□□□ -0.18
LINC01004-202ENST00000450686 RTCBQ9Y3I0 505 aaKnown RBP13.93□□□□□ -0.18
LINC01004-202ENST00000450686 ERVV-2B6SEH9 535 aa13.92□□□□□ -0.18
LINC01004-202ENST00000450686 TRAPPC3LQ5T215 181 aa13.92□□□□□ -0.18
LINC01004-202ENST00000450686 SULT6B1Q6IMI4 303 aa13.92□□□□□ -0.18
LINC01004-202ENST00000450686 DCAF5Q96JK2 942 aa13.92□□□□□ -0.18
LINC01004-202ENST00000450686 SRP68Q9UHB9 627 aaKnown RBP13.92□□□□□ -0.18
LINC01004-202ENST00000450686 VIRMAQ69YN4 1812 aaKnown RBP13.92□□□□□ -0.18
LINC01004-202ENST00000450686 ZNF831Q5JPB2 1677 aa13.91□□□□□ -0.18
LINC01004-202ENST00000450686 SCN11AQ9UI33 1791 aa13.91□□□□□ -0.18
LINC01004-202ENST00000450686 C10orf71Q711Q0 1435 aa13.91□□□□□ -0.18
LINC01004-202ENST00000450686 GYS1P13807 737 aa13.91□□□□□ -0.18
LINC01004-202ENST00000450686 MTHFSP49914 203 aa13.91□□□□□ -0.18
LINC01004-202ENST00000450686 NFATC2IPQ8NCF5 419 aa13.91□□□□□ -0.18
LINC01004-202ENST00000450686 BCS1LQ9Y276 419 aa13.91□□□□□ -0.18
LINC01004-202ENST00000450686 DPEP1P16444 411 aa13.9□□□□□ -0.18
LINC01004-202ENST00000450686 CNGB1Q14028 1251 aaPredicted RBP13.9□□□□□ -0.18
LINC01004-202ENST00000450686 CCER1Q8TC90 406 aaPredicted RBP13.9□□□□□ -0.18
LINC01004-202ENST00000450686 BRCA1P38398 1863 aaKnown RBP13.9□□□□□ -0.18
LINC01004-202ENST00000450686 CNTNAP4Q9C0A0 1308 aa13.9□□□□□ -0.19
LINC01004-202ENST00000450686 CLSPNQ9HAW4 1339 aa13.9□□□□□ -0.19
LINC01004-202ENST00000450686 IL13P35225 146 aa13.89□□□□□ -0.19
LINC01004-202ENST00000450686 RFC4P35249 363 aa13.89□□□□□ -0.19
LINC01004-202ENST00000450686 CRKLP46109 303 aaKnown RBP13.89□□□□□ -0.19
LINC01004-202ENST00000450686 C1orf141Q5JVX7 400 aa13.89□□□□□ -0.19
LINC01004-202ENST00000450686 RPS6KA4O75676 772 aa13.88□□□□□ -0.19
LINC01004-202ENST00000450686 HSP90AB1P08238 724 aaKnown RBP13.88□□□□□ -0.19
LINC01004-202ENST00000450686 HMOX1P09601 288 aa13.88□□□□□ -0.19
LINC01004-202ENST00000450686 HMGB2P26583 209 aaKnown RBP13.88□□□□□ -0.19
LINC01004-202ENST00000450686 DDR1Q08345 913 aa13.88□□□□□ -0.19
LINC01004-202ENST00000450686 LGR6Q9HBX8 967 aa13.88□□□□□ -0.19
LINC01004-202ENST00000450686 ADAMTS7Q9UKP4 1686 aa13.88□□□□□ -0.19
LINC01004-202ENST00000450686 SLC39A6Q13433 755 aa13.87□□□□□ -0.19
LINC01004-202ENST00000450686 AMOTQ4VCS5 1084 aa13.87□□□□□ -0.19
LINC01004-202ENST00000450686 RC3H1Q5TC82 1133 aaKnown RBP13.87□□□□□ -0.19
LINC01004-202ENST00000450686 ARHGAP27Q6ZUM4 889 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms