RNA–Protein interactions for RNA: ENST00000450510.2

HOXD8-203, Transcript of homeobox D8, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HOXD8, Length 1,268 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8-203ENST00000450510 NHSQ6T4R5 1651 aa23.48■■□□□ 1.35
HOXD8-203ENST00000450510 DLG5Q8TDM6 1919 aa23.47■■□□□ 1.35
HOXD8-203ENST00000450510 ERVV-2B6SEH9 535 aa23.46■■□□□ 1.35
HOXD8-203ENST00000450510 TNS1Q9HBL0 1735 aaKnown RBP23.45■■□□□ 1.34
HOXD8-203ENST00000450510 PLSCR1O15162 318 aa23.45■■□□□ 1.34
HOXD8-203ENST00000450510 KCNQ2O43526 872 aa23.45■■□□□ 1.34
HOXD8-203ENST00000450510 BAG6P46379 1132 aa23.45■■□□□ 1.34
HOXD8-203ENST00000450510 PRIM1P49642 420 aaKnown RBP23.45■■□□□ 1.34
HOXD8-203ENST00000450510 CCDC136Q96JN2 1154 aa23.45■■□□□ 1.34
HOXD8-203ENST00000450510 IFT57Q9NWB7 429 aa23.45■■□□□ 1.34
HOXD8-203ENST00000450510 RARSP54136 660 aaKnown RBP23.44■■□□□ 1.34
HOXD8-203ENST00000450510 GNAI1P63096 354 aa23.44■■□□□ 1.34
HOXD8-203ENST00000450510 EXOC6Q8TAG9 804 aa23.44■■□□□ 1.34
HOXD8-203ENST00000450510 ZNF428Q96B54 188 aa23.44■■□□□ 1.34
HOXD8-203ENST00000450510 ACSBG1Q96GR2 724 aa23.44■■□□□ 1.34
HOXD8-203ENST00000450510 PDE3AQ14432 1141 aa23.43■■□□□ 1.34
HOXD8-203ENST00000450510 KAT6BQ8WYB5 2073 aa23.42■■□□□ 1.34
HOXD8-203ENST00000450510 DOT1LQ8TEK3 1739 aa23.42■■□□□ 1.34
HOXD8-203ENST00000450510 GNAT3A8MTJ3 354 aa23.42■■□□□ 1.34
HOXD8-203ENST00000450510 HTATSF1O43719 755 aaKnown RBP23.42■■□□□ 1.34
HOXD8-203ENST00000450510 PLIN1O60240 522 aa23.42■■□□□ 1.34
HOXD8-203ENST00000450510 APBA3O96018 575 aa23.42■■□□□ 1.34
HOXD8-203ENST00000450510 B4GALNT3Q6L9W6 998 aa23.42■■□□□ 1.34
HOXD8-203ENST00000450510 KDM6AO15550 1401 aaPredicted RBP23.41■■□□□ 1.34
HOXD8-203ENST00000450510 MAP3K5Q99683 1374 aa23.4■■□□□ 1.34
HOXD8-203ENST00000450510 MPRIPQ6WCQ1 1025 aa23.4■■□□□ 1.34
HOXD8-203ENST00000450510 PTF1AQ7RTS3 328 aa23.4■■□□□ 1.34
HOXD8-203ENST00000450510 ADAMTS7Q9UKP4 1686 aa23.4■■□□□ 1.34
HOXD8-203ENST00000450510 TOGARAM1Q9Y4F4 1720 aa23.39■■□□□ 1.34
HOXD8-203ENST00000450510 ZNF853P0CG23 659 aa23.39■■□□□ 1.33
HOXD8-203ENST00000450510 SYTL4Q96C24 671 aaPredicted RBP23.39■■□□□ 1.33
HOXD8-203ENST00000450510 CRBNQ96SW2 442 aa23.39■■□□□ 1.33
HOXD8-203ENST00000450510 RGPD3A6NKT7 1758 aaPredicted RBP23.38■■□□□ 1.33
HOXD8-203ENST00000450510 RGPD4Q7Z3J3 1758 aa23.38■■□□□ 1.33
HOXD8-203ENST00000450510 SCN11AQ9UI33 1791 aa23.38■■□□□ 1.33
HOXD8-203ENST00000450510 RNMTO43148 476 aaKnown RBP23.38■■□□□ 1.33
HOXD8-203ENST00000450510 BCAR3O75815 825 aa23.38■■□□□ 1.33
HOXD8-203ENST00000450510 EXOSC9Q06265 439 aaKnown RBP23.38■■□□□ 1.33
HOXD8-203ENST00000450510 TSR2Q969E8 191 aaKnown RBP23.38■■□□□ 1.33
HOXD8-203ENST00000450510 CAMKK2Q96RR4 588 aa23.38■■□□□ 1.33
HOXD8-203ENST00000450510 TMOD3Q9NYL9 352 aa23.38■■□□□ 1.33
HOXD8-203ENST00000450510 MS4A1P11836 297 aa23.37■■□□□ 1.33
HOXD8-203ENST00000450510 AAMPQ13685 434 aa23.37■■□□□ 1.33
HOXD8-203ENST00000450510 CFAP44Q96MT7 982 aa23.37■■□□□ 1.33
HOXD8-203ENST00000450510 ITGB4P16144 1822 aa23.37■■□□□ 1.33
HOXD8-203ENST00000450510 BTAF1O14981 1849 aa23.36■■□□□ 1.33
HOXD8-203ENST00000450510 CABP4P57796 275 aa23.36■■□□□ 1.33
HOXD8-203ENST00000450510 DEFB132Q7Z7B7 95 aa23.36■■□□□ 1.33
HOXD8-203ENST00000450510 PIGBQ92521 554 aa23.36■■□□□ 1.33
HOXD8-203ENST00000450510 LGR6Q9HBX8 967 aa23.36■■□□□ 1.33
HOXD8-203ENST00000450510 CEMIPQ8WUJ3 1361 aa23.36■■□□□ 1.33
HOXD8-203ENST00000450510 CANXP27824 592 aaKnown RBP23.35■■□□□ 1.33
HOXD8-203ENST00000450510 EN1Q05925 392 aaPredicted RBP23.35■■□□□ 1.33
HOXD8-203ENST00000450510 ALDH1L2Q3SY69 923 aa23.35■■□□□ 1.33
HOXD8-203ENST00000450510 IL17REQ8NFR9 667 aa23.35■■□□□ 1.33
HOXD8-203ENST00000450510 RTF1Q92541 710 aaKnown RBP23.35■■□□□ 1.33
HOXD8-203ENST00000450510 SMARCC1Q92922 1105 aaPredicted RBP23.34■■□□□ 1.33
HOXD8-203ENST00000450510 SLC52A2Q9HAB3 445 aa23.34■■□□□ 1.33
HOXD8-203ENST00000450510 MRC1P22897 1456 aa23.34■■□□□ 1.33
HOXD8-203ENST00000450510 HMGB2P26583 209 aaKnown RBP23.33■■□□□ 1.33
HOXD8-203ENST00000450510 C20orf194Q5TEA3 1177 aa23.33■■□□□ 1.33
HOXD8-203ENST00000450510 NFATC2IPQ8NCF5 419 aa23.33■■□□□ 1.33
HOXD8-203ENST00000450510 BRPF1P55201 1214 aaPredicted RBP23.32■■□□□ 1.32
HOXD8-203ENST00000450510 EZH2Q15910 746 aaKnown RBP23.31■■□□□ 1.32
HOXD8-203ENST00000450510 VIRMAQ69YN4 1812 aaKnown RBP23.31■■□□□ 1.32
HOXD8-203ENST00000450510 KIF16BQ96L93 1317 aa23.31■■□□□ 1.32
HOXD8-203ENST00000450510 SLC27A3Q5K4L6 730 aa23.3■■□□□ 1.32
HOXD8-203ENST00000450510 PROM2Q8N271 834 aa23.3■■□□□ 1.32
HOXD8-203ENST00000450510 TEFQ10587 303 aa23.29■■□□□ 1.32
HOXD8-203ENST00000450510 TXNRD1Q16881 649 aa23.29■■□□□ 1.32
HOXD8-203ENST00000450510 ZKSCAN2Q63HK3 967 aa23.29■■□□□ 1.32
HOXD8-203ENST00000450510 MBIPQ9NS73 344 aa23.29■■□□□ 1.32
HOXD8-203ENST00000450510 THUMPD2Q9BTF0 503 aaKnown RBP23.28■■□□□ 1.32
HOXD8-203ENST00000450510 ATG3Q9NT62 314 aa23.28■■□□□ 1.32
HOXD8-203ENST00000450510 SMC4Q9NTJ3 1288 aa23.28■■□□□ 1.32
HOXD8-203ENST00000450510 LY75O60449 1722 aa23.28■■□□□ 1.32
HOXD8-203ENST00000450510 CHL1O00533 1208 aa23.27■■□□□ 1.32
HOXD8-203ENST00000450510 LAS1LQ9Y4W2 734 aaKnown RBP23.27■■□□□ 1.32
HOXD8-203ENST00000450510 PALLDQ8WX93 1383 aa23.27■■□□□ 1.31
HOXD8-203ENST00000450510 RREB1Q92766 1687 aa23.26■■□□□ 1.31
HOXD8-203ENST00000450510 IPO8O15397 1037 aaKnown RBP23.26■■□□□ 1.31
HOXD8-203ENST00000450510 MCM10Q7L590 875 aa23.26■■□□□ 1.31
HOXD8-203ENST00000450510 ASAP1Q9ULH1 1129 aa23.26■■□□□ 1.31
HOXD8-203ENST00000450510 SSH1Q8WYL5 1049 aa23.25■■□□□ 1.31
HOXD8-203ENST00000450510 FRAT1Q92837 279 aaPredicted RBP23.25■■□□□ 1.31
HOXD8-203ENST00000450510 BABAM1Q9NWV8 329 aa23.25■■□□□ 1.31
HOXD8-203ENST00000450510 SIPA1L3O60292 1781 aaPredicted RBP23.24■■□□□ 1.31
HOXD8-203ENST00000450510 VAMP4O75379 141 aa23.23■■□□□ 1.31
HOXD8-203ENST00000450510 DCTN1Q14203 1278 aa23.23■■□□□ 1.31
HOXD8-203ENST00000450510 TAF7Q15545 349 aaPredicted RBP23.23■■□□□ 1.31
HOXD8-203ENST00000450510 LOC102724428A0A0B4J2F2 783 aa23.21■■□□□ 1.31
HOXD8-203ENST00000450510 SIK1P57059 783 aa23.21■■□□□ 1.31
HOXD8-203ENST00000450510 ARHGAP45Q92619 1136 aa23.21■■□□□ 1.31
HOXD8-203ENST00000450510 CCNL1Q9UK58 526 aaPredicted RBP23.21■■□□□ 1.31
HOXD8-203ENST00000450510 ZNF831Q5JPB2 1677 aa23.21■■□□□ 1.31
HOXD8-203ENST00000450510 SOS1Q07889 1333 aaPredicted RBP23.2■■□□□ 1.3
HOXD8-203ENST00000450510 TWISTNBQ3B726 338 aaPredicted RBP23.2■■□□□ 1.3
HOXD8-203ENST00000450510 ZNF790Q6PG37 636 aa23.2■■□□□ 1.3
HOXD8-203ENST00000450510 ATF7IPQ6VMQ6 1270 aa23.2■■□□□ 1.3
HOXD8-203ENST00000450510 CENPQQ7L2Z9 268 aaPredicted RBP23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms