RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 HAP1P54257 671 aaPredicted RBP16.44■□□□□ 0.22
SYNGAP1-204ENST00000449372 ANKLE2Q86XL3 938 aa16.44■□□□□ 0.22
SYNGAP1-204ENST00000449372 HMGN5P82970 282 aaKnown RBP16.44■□□□□ 0.22
SYNGAP1-204ENST00000449372 ZFP91Q96JP5 570 aaPredicted RBP16.44■□□□□ 0.22
SYNGAP1-204ENST00000449372 PRIMPOLQ96LW4 560 aa16.44■□□□□ 0.22
SYNGAP1-204ENST00000449372 PCDHB15Q9Y5E8 787 aa16.44■□□□□ 0.22
SYNGAP1-204ENST00000449372 SBNO1A3KN83 1393 aa16.43■□□□□ 0.22
SYNGAP1-204ENST00000449372 KDRP35968 1356 aa16.43■□□□□ 0.22
SYNGAP1-204ENST00000449372 PHRF1Q9P1Y6 1649 aaKnown RBP16.43■□□□□ 0.22
SYNGAP1-204ENST00000449372 RBM25P49756 843 aaKnown RBP16.43■□□□□ 0.22
SYNGAP1-204ENST00000449372 KIAA2012Q0VF49 1180 aa16.43■□□□□ 0.22
SYNGAP1-204ENST00000449372 ALDH1L2Q3SY69 923 aa16.43■□□□□ 0.22
SYNGAP1-204ENST00000449372 CAVIN1Q6NZI2 390 aaKnown RBP16.43■□□□□ 0.22
SYNGAP1-204ENST00000449372 IFT57Q9NWB7 429 aa16.43■□□□□ 0.22
SYNGAP1-204ENST00000449372 MAP3K19Q56UN5 1328 aa16.43■□□□□ 0.22
SYNGAP1-204ENST00000449372 HSP90AB2PQ58FF8 381 aa16.43■□□□□ 0.22
SYNGAP1-204ENST00000449372 SNX21Q969T3 373 aa16.43■□□□□ 0.22
SYNGAP1-204ENST00000449372 ARHGEF10O15013 1369 aa16.43■□□□□ 0.22
SYNGAP1-204ENST00000449372 IRX5P78411 483 aaPredicted RBP16.43■□□□□ 0.22
SYNGAP1-204ENST00000449372 ZSCAN23Q3MJ62 389 aa16.43■□□□□ 0.22
SYNGAP1-204ENST00000449372 ATF7IPQ6VMQ6 1270 aa16.43■□□□□ 0.22
SYNGAP1-204ENST00000449372 AEBP1Q8IUX7 1158 aa16.43■□□□□ 0.22
SYNGAP1-204ENST00000449372 ADGRL3Q9HAR2 1447 aa16.42■□□□□ 0.22
SYNGAP1-204ENST00000449372 TRIM27P14373 513 aa16.42■□□□□ 0.22
SYNGAP1-204ENST00000449372 FAM177BA6PVY3 158 aa16.42■□□□□ 0.22
SYNGAP1-204ENST00000449372 SSFA2P28290 1259 aa16.42■□□□□ 0.22
SYNGAP1-204ENST00000449372 THUMPD2Q9BTF0 503 aaKnown RBP16.42■□□□□ 0.22
SYNGAP1-204ENST00000449372 KIF3AQ9Y496 699 aa16.42■□□□□ 0.22
SYNGAP1-204ENST00000449372 LRRC37A3O60309 1634 aa16.42■□□□□ 0.22
SYNGAP1-204ENST00000449372 LTN1O94822 1766 aa16.42■□□□□ 0.22
SYNGAP1-204ENST00000449372 KCNJ4P48050 445 aa16.41■□□□□ 0.22
SYNGAP1-204ENST00000449372 PDCL2Q8N4E4 241 aa16.41■□□□□ 0.22
SYNGAP1-204ENST00000449372 NPHP4O75161 1426 aaPredicted RBP16.41■□□□□ 0.22
SYNGAP1-204ENST00000449372 PRIM1P49642 420 aaKnown RBP16.41■□□□□ 0.22
SYNGAP1-204ENST00000449372 VAMP4O75379 141 aa16.41■□□□□ 0.22
SYNGAP1-204ENST00000449372 FLT4P35916 1363 aa16.41■□□□□ 0.22
SYNGAP1-204ENST00000449372 KIF24Q5T7B8 1368 aa16.41■□□□□ 0.22
SYNGAP1-204ENST00000449372 PTMAP06454 111 aaKnown RBP16.4■□□□□ 0.22
SYNGAP1-204ENST00000449372 GTF2F1P35269 517 aaKnown RBP eCLIP16.4■□□□□ 0.221e-6■■■■□ 26.1
SYNGAP1-204ENST00000449372 CHMP4AQ9BY43 222 aa16.4■□□□□ 0.22
SYNGAP1-204ENST00000449372 NFAT5O94916 1531 aa16.4■□□□□ 0.22
SYNGAP1-204ENST00000449372 GCC1Q96CN9 775 aa16.4■□□□□ 0.22
SYNGAP1-204ENST00000449372 CASC1Q6TDU7 716 aa16.4■□□□□ 0.22
SYNGAP1-204ENST00000449372 MBIPQ9NS73 344 aa16.4■□□□□ 0.22
SYNGAP1-204ENST00000449372 BAG4O95429 457 aaKnown RBP16.39■□□□□ 0.21
SYNGAP1-204ENST00000449372 NOB1Q9ULX3 412 aaKnown RBP16.39■□□□□ 0.21
SYNGAP1-204ENST00000449372 SULT6B1Q6IMI4 303 aa16.39■□□□□ 0.21
SYNGAP1-204ENST00000449372 GNAI1P63096 354 aa16.38■□□□□ 0.21
SYNGAP1-204ENST00000449372 IRX3P78415 501 aaPredicted RBP16.38■□□□□ 0.21
SYNGAP1-204ENST00000449372 NGDNQ8NEJ9 315 aaKnown RBP16.38■□□□□ 0.21
SYNGAP1-204ENST00000449372 FAM83GA6ND36 823 aa16.38■□□□□ 0.21
SYNGAP1-204ENST00000449372 TSPYL6Q8N831 410 aa16.38■□□□□ 0.21
SYNGAP1-204ENST00000449372 CRB1P82279 1406 aa16.38■□□□□ 0.21
SYNGAP1-204ENST00000449372 TRPM3Q9HCF6 1732 aaPredicted RBP16.38■□□□□ 0.21
SYNGAP1-204ENST00000449372 IGSF1Q8N6C5 1336 aa16.38■□□□□ 0.21
SYNGAP1-204ENST00000449372 DNAJC2Q99543 621 aaKnown RBP16.38■□□□□ 0.21
SYNGAP1-204ENST00000449372 U2AF2P26368 475 aaKnown RBP eCLIP16.37■□□□□ 0.21
SYNGAP1-204ENST00000449372 LMOD3Q0VAK6 560 aa16.37■□□□□ 0.21
SYNGAP1-204ENST00000449372 TEX2Q8IWB9 1127 aa16.37■□□□□ 0.21
SYNGAP1-204ENST00000449372 DNAJC5Q9H3Z4 198 aa16.37■□□□□ 0.21
SYNGAP1-204ENST00000449372 BCL2L12Q9HB09 334 aa16.37■□□□□ 0.21
SYNGAP1-204ENST00000449372 MCTP1Q6DN14 999 aa16.36■□□□□ 0.21
SYNGAP1-204ENST00000449372 MRPL50Q8N5N7 158 aaKnown RBP16.36■□□□□ 0.21
SYNGAP1-204ENST00000449372 CLEC17AQ6ZS10 378 aa16.36■□□□□ 0.21
SYNGAP1-204ENST00000449372 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.35■□□□□ 0.21
SYNGAP1-204ENST00000449372 STRCP1A6NGW2 1772 aa16.35■□□□□ 0.21
SYNGAP1-204ENST00000449372 DCTN1Q14203 1278 aa16.34■□□□□ 0.21
SYNGAP1-204ENST00000449372 BMP2KLQ5H9B9 411 aa16.34■□□□□ 0.21
SYNGAP1-204ENST00000449372 ARHGAP45Q92619 1136 aa16.34■□□□□ 0.21
SYNGAP1-204ENST00000449372 SLC20A2Q08357 652 aa16.34■□□□□ 0.21
SYNGAP1-204ENST00000449372 C8orf58Q8NAV2 365 aa16.34■□□□□ 0.21
SYNGAP1-204ENST00000449372 ZBTB40Q9NUA8 1239 aa16.34■□□□□ 0.21
SYNGAP1-204ENST00000449372 CHL1O00533 1208 aa16.33■□□□□ 0.21
SYNGAP1-204ENST00000449372 TMEM57Q8N5G2 664 aa16.33■□□□□ 0.21
SYNGAP1-204ENST00000449372 NUCB2P80303 420 aa16.33■□□□□ 0.2
SYNGAP1-204ENST00000449372 SECISBP2LQ93073 1101 aaKnown RBP16.33■□□□□ 0.2
SYNGAP1-204ENST00000449372 EYA1Q99502 592 aa16.33■□□□□ 0.2
SYNGAP1-204ENST00000449372 PHF8Q9UPP1 1060 aa16.33■□□□□ 0.2
SYNGAP1-204ENST00000449372 SLIT3O75094 1523 aa16.33■□□□□ 0.2
SYNGAP1-204ENST00000449372 CHD1LQ86WJ1 897 aa16.32■□□□□ 0.2
SYNGAP1-204ENST00000449372 RTL1A6NKG5 1358 aa16.32■□□□□ 0.2
SYNGAP1-204ENST00000449372 HOXC9P31274 260 aa16.32■□□□□ 0.2
SYNGAP1-204ENST00000449372 NOLC1Q14978 699 aaKnown RBP eCLIP16.32■□□□□ 0.2
SYNGAP1-204ENST00000449372 FEZ1Q99689 392 aa16.32■□□□□ 0.2
SYNGAP1-204ENST00000449372 CCDC66A2RUB6 948 aa16.32■□□□□ 0.2
SYNGAP1-204ENST00000449372 K7ELQ4 463 aaPredicted RBP16.32■□□□□ 0.2
SYNGAP1-204ENST00000449372 API5Q9BZZ5 524 aaKnown RBP16.31■□□□□ 0.2
SYNGAP1-204ENST00000449372 MST1RQ04912 1400 aa16.31■□□□□ 0.2
SYNGAP1-204ENST00000449372 NLRP6P59044 892 aa16.31■□□□□ 0.2
SYNGAP1-204ENST00000449372 NUCB1Q02818 461 aa16.31■□□□□ 0.2
SYNGAP1-204ENST00000449372 CERS3Q8IU89 383 aa16.31■□□□□ 0.2
SYNGAP1-204ENST00000449372 KIAA0232Q92628 1395 aa16.31■□□□□ 0.2
SYNGAP1-204ENST00000449372 ABCC4O15439 1325 aa16.31■□□□□ 0.2
SYNGAP1-204ENST00000449372 RGS12O14924 1447 aa16.31■□□□□ 0.2
SYNGAP1-204ENST00000449372 RNF214Q8ND24 703 aa16.3■□□□□ 0.2
SYNGAP1-204ENST00000449372 RBM33Q96EV2 1170 aaKnown RBP16.3■□□□□ 0.2
SYNGAP1-204ENST00000449372 LMBRD1Q9NUN5 540 aa16.3■□□□□ 0.2
SYNGAP1-204ENST00000449372 RGPD2P0DJD1 1756 aa16.3■□□□□ 0.2
SYNGAP1-204ENST00000449372 CAMTA1Q9Y6Y1 1673 aa16.3■□□□□ 0.2
SYNGAP1-204ENST00000449372 CD2BP2O95400 341 aaKnown RBP16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 151.1 ms