RNA–Protein interactions for RNA: ENST00000447038.5

LMO7-206, Transcript of LIM domain 7, humanhuman

TSL 2

Gene LMO7, Length 3,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO7-206ENST00000447038 VPS72Q15906 364 aa11.92□□□□□ -0.5
LMO7-206ENST00000447038 BARGINQ6ZT62 677 aa11.92□□□□□ -0.5
LMO7-206ENST00000447038 KDM3BQ7LBC6 1761 aa11.92□□□□□ -0.5
LMO7-206ENST00000447038 SPATA31A1Q5TZJ5 1347 aa11.92□□□□□ -0.5
LMO7-206ENST00000447038 UNC5CLQ8IV45 518 aa11.91□□□□□ -0.5
LMO7-206ENST00000447038 IL17REQ8NFR9 667 aa11.91□□□□□ -0.5
LMO7-206ENST00000447038 DDX54Q8TDD1 881 aaKnown RBP11.91□□□□□ -0.5
LMO7-206ENST00000447038 RNF123Q5XPI4 1314 aa11.91□□□□□ -0.5
LMO7-206ENST00000447038 LARP1Q6PKG0 1096 aaKnown RBP11.91□□□□□ -0.5
LMO7-206ENST00000447038 IL16Q14005 1332 aa11.91□□□□□ -0.5
LMO7-206ENST00000447038 TNS2Q63HR2 1409 aa11.91□□□□□ -0.5
LMO7-206ENST00000447038 ZNF831Q5JPB2 1677 aa11.9□□□□□ -0.5
LMO7-206ENST00000447038 ONECUT3O60422 494 aaPredicted RBP11.9□□□□□ -0.5
LMO7-206ENST00000447038 UBR2Q8IWV8 1755 aa11.9□□□□□ -0.5
LMO7-206ENST00000447038 NOB1Q9ULX3 412 aaKnown RBP11.9□□□□□ -0.5
LMO7-206ENST00000447038 HTATSF1O43719 755 aaKnown RBP11.89□□□□□ -0.51
LMO7-206ENST00000447038 EIF2S2P20042 333 aaKnown RBP11.89□□□□□ -0.51
LMO7-206ENST00000447038 CEMIPQ8WUJ3 1361 aa11.89□□□□□ -0.51
LMO7-206ENST00000447038 MAP3K5Q99683 1374 aa11.89□□□□□ -0.51
LMO7-206ENST00000447038 AMOTQ4VCS5 1084 aa11.88□□□□□ -0.51
LMO7-206ENST00000447038 VAMP4O75379 141 aa11.88□□□□□ -0.51
LMO7-206ENST00000447038 ZKSCAN2Q63HK3 967 aa11.88□□□□□ -0.51
LMO7-206ENST00000447038 ITPRIPQ8IWB1 547 aa11.88□□□□□ -0.51
LMO7-206ENST00000447038 CDCA7Q9BWT1 371 aaPredicted RBP11.88□□□□□ -0.51
LMO7-206ENST00000447038 RLBP1P12271 317 aa11.87□□□□□ -0.51
LMO7-206ENST00000447038 NHSQ6T4R5 1651 aa11.87□□□□□ -0.51
LMO7-206ENST00000447038 TAF7Q15545 349 aaPredicted RBP11.87□□□□□ -0.51
LMO7-206ENST00000447038 CHL1O00533 1208 aa11.87□□□□□ -0.51
LMO7-206ENST00000447038 ZNF853P0CG23 659 aa11.87□□□□□ -0.51
LMO7-206ENST00000447038 NKX1-1Q15270 411 aaPredicted RBP11.87□□□□□ -0.51
LMO7-206ENST00000447038 AKAP4Q5JQC9 854 aa11.87□□□□□ -0.51
LMO7-206ENST00000447038 SPG7Q9UQ90 795 aa11.87□□□□□ -0.51
LMO7-206ENST00000447038 BTBD11A6QL63 1104 aa11.86□□□□□ -0.51
LMO7-206ENST00000447038 KCNQ3O43525 872 aa11.86□□□□□ -0.51
LMO7-206ENST00000447038 ERICH6BQ5W0A0 696 aa11.86□□□□□ -0.51
LMO7-206ENST00000447038 BRWD3Q6RI45 1802 aa11.86□□□□□ -0.51
LMO7-206ENST00000447038 SBF2Q86WG5 1849 aa11.86□□□□□ -0.51
LMO7-206ENST00000447038 ITGB4P16144 1822 aa11.86□□□□□ -0.51
LMO7-206ENST00000447038 SLC39A6Q13433 755 aa11.86□□□□□ -0.51
LMO7-206ENST00000447038 DZIP1LQ8IYY4 767 aaKnown RBP11.86□□□□□ -0.51
LMO7-206ENST00000447038 KLHL34Q8N239 644 aa11.86□□□□□ -0.51
LMO7-206ENST00000447038 DOT1LQ8TEK3 1739 aa11.85□□□□□ -0.51
LMO7-206ENST00000447038 TRIM27P14373 513 aa11.85□□□□□ -0.51
LMO7-206ENST00000447038 C8orf37Q96NL8 207 aa11.85□□□□□ -0.51
LMO7-206ENST00000447038 AFF2P51816 1311 aa11.85□□□□□ -0.51
LMO7-206ENST00000447038 RNMTO43148 476 aaKnown RBP11.85□□□□□ -0.51
LMO7-206ENST00000447038 KDM6AO15550 1401 aaPredicted RBP11.85□□□□□ -0.51
LMO7-206ENST00000447038 RGPD3A6NKT7 1758 aaPredicted RBP11.84□□□□□ -0.51
LMO7-206ENST00000447038 RGPD4Q7Z3J3 1758 aa11.84□□□□□ -0.51
LMO7-206ENST00000447038 SLC4A2P04920 1241 aa11.84□□□□□ -0.51
LMO7-206ENST00000447038 NFATC2IPQ8NCF5 419 aa11.84□□□□□ -0.51
LMO7-206ENST00000447038 IPO8O15397 1037 aaKnown RBP11.84□□□□□ -0.51
LMO7-206ENST00000447038 SLC4A10Q6U841 1118 aa11.84□□□□□ -0.51
LMO7-206ENST00000447038 ATF7IPQ6VMQ6 1270 aa11.84□□□□□ -0.51
LMO7-206ENST00000447038 SKAP1Q86WV1 359 aa11.84□□□□□ -0.51
LMO7-206ENST00000447038 IFNL2Q8IZJ0 200 aa11.84□□□□□ -0.51
LMO7-206ENST00000447038 CT47B1P0C2W7 299 aaPredicted RBP11.83□□□□□ -0.51
LMO7-206ENST00000447038 IL2RBP14784 551 aa11.83□□□□□ -0.51
LMO7-206ENST00000447038 NGLY1Q96IV0 654 aa11.83□□□□□ -0.51
LMO7-206ENST00000447038 ZCRB1Q8TBF4 217 aaKnown RBP11.83□□□□□ -0.52
LMO7-206ENST00000447038 SYTL4Q96C24 671 aaPredicted RBP11.83□□□□□ -0.52
LMO7-206ENST00000447038 USP21Q9UK80 565 aa11.83□□□□□ -0.52
LMO7-206ENST00000447038 CYP27B1O15528 508 aa11.83□□□□□ -0.52
LMO7-206ENST00000447038 ANXA1P04083 346 aa11.83□□□□□ -0.52
LMO7-206ENST00000447038 STK31Q9BXU1 1019 aa11.83□□□□□ -0.52
LMO7-206ENST00000447038 TMEM57Q8N5G2 664 aa11.82□□□□□ -0.52
LMO7-206ENST00000447038 BABAM1Q9NWV8 329 aa11.82□□□□□ -0.52
LMO7-206ENST00000447038 KIF16BQ96L93 1317 aa11.82□□□□□ -0.52
LMO7-206ENST00000447038 PHKG2P15735 406 aa11.82□□□□□ -0.52
LMO7-206ENST00000447038 PDE3AQ14432 1141 aa11.82□□□□□ -0.52
LMO7-206ENST00000447038 ZNF428Q96B54 188 aa11.82□□□□□ -0.52
LMO7-206ENST00000447038 TRPC5Q9UL62 973 aaPredicted RBP11.82□□□□□ -0.52
LMO7-206ENST00000447038 LAMB4A4D0S4 1761 aa11.82□□□□□ -0.52
LMO7-206ENST00000447038 RREB1Q92766 1687 aa11.82□□□□□ -0.52
LMO7-206ENST00000447038 PCDH11XQ9BZA7 1347 aa11.82□□□□□ -0.52
LMO7-206ENST00000447038 PCDH11YQ9BZA8 1340 aa11.82□□□□□ -0.52
LMO7-206ENST00000447038 CABP4P57796 275 aa11.81□□□□□ -0.52
LMO7-206ENST00000447038 HDGFL1Q5TGJ6 251 aa11.81□□□□□ -0.52
LMO7-206ENST00000447038 MEX3CQ5U5Q3 659 aaKnown RBP11.81□□□□□ -0.52
LMO7-206ENST00000447038 ZNF772Q68DY9 489 aaPredicted RBP11.81□□□□□ -0.52
LMO7-206ENST00000447038 MRPL50Q8N5N7 158 aaKnown RBP11.81□□□□□ -0.52
LMO7-206ENST00000447038 GJD4Q96KN9 370 aaPredicted RBP11.81□□□□□ -0.52
LMO7-206ENST00000447038 RGS17Q9UGC6 210 aaPredicted RBP11.81□□□□□ -0.52
LMO7-206ENST00000447038 ALDH1L2Q3SY69 923 aa11.81□□□□□ -0.52
LMO7-206ENST00000447038 F6X3S4 739 aa11.8□□□□□ -0.52
LMO7-206ENST00000447038 PRAMEF22A3QJZ6 481 aa11.8□□□□□ -0.52
LMO7-206ENST00000447038 FKBP5Q13451 457 aaPredicted RBP11.8□□□□□ -0.52
LMO7-206ENST00000447038 G2E3Q7L622 706 aa11.8□□□□□ -0.52
LMO7-206ENST00000447038 TTC5Q8N0Z6 440 aa11.8□□□□□ -0.52
LMO7-206ENST00000447038 C1orf115Q9H7X2 142 aa11.8□□□□□ -0.52
LMO7-206ENST00000447038 LY75O60449 1722 aa11.8□□□□□ -0.52
LMO7-206ENST00000447038 RTN4Q9NQC3 1192 aaKnown RBP11.79□□□□□ -0.52
LMO7-206ENST00000447038 PTCD1O75127 700 aaKnown RBP11.79□□□□□ -0.52
LMO7-206ENST00000447038 PIP4K2AP48426 406 aaPredicted RBP11.79□□□□□ -0.52
LMO7-206ENST00000447038 KCPQ6ZWJ8 1503 aa11.79□□□□□ -0.52
LMO7-206ENST00000447038 TNS1Q9HBL0 1735 aaKnown RBP11.79□□□□□ -0.52
LMO7-206ENST00000447038 MS4A1P11836 297 aa11.79□□□□□ -0.52
LMO7-206ENST00000447038 MVPQ14764 893 aaKnown RBP11.79□□□□□ -0.52
LMO7-206ENST00000447038 CCDC30Q5VVM6 783 aa11.78□□□□□ -0.52
LMO7-206ENST00000447038 HEG1Q9ULI3 1381 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 122.7 ms