RNA–Protein interactions for RNA: ENST00000447024.5

SMARCE1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-206ENST00000447024 GDF11O95390 407 aa12.71□□□□□ -0.37
SMARCE1-206ENST00000447024 TRIM34Q9BYJ4 488 aa12.71□□□□□ -0.37
SMARCE1-206ENST00000447024 CYLDQ9NQC7 956 aa12.71□□□□□ -0.37
SMARCE1-206ENST00000447024 LOC100996750A0A140TA64 210 aa12.7□□□□□ -0.38
SMARCE1-206ENST00000447024 SEPT12Q8IYM1 358 aa12.7□□□□□ -0.38
SMARCE1-206ENST00000447024 KRTAP4-6Q9BYQ5 205 aa12.7□□□□□ -0.38
SMARCE1-206ENST00000447024 KIF13AQ9H1H9 1805 aa12.69□□□□□ -0.38
SMARCE1-206ENST00000447024 ARHGEF15O94989 841 aa12.69□□□□□ -0.38
SMARCE1-206ENST00000447024 FAM69CQ0P6D2 419 aa12.69□□□□□ -0.38
SMARCE1-206ENST00000447024 LYSMD3Q7Z3D4 306 aa12.69□□□□□ -0.38
SMARCE1-206ENST00000447024 SAMD9Q5K651 1589 aa12.69□□□□□ -0.38
SMARCE1-206ENST00000447024 DIP2BQ9P265 1576 aa12.69□□□□□ -0.38
SMARCE1-206ENST00000447024 TTBK1Q5TCY1 1321 aaPredicted RBP12.68□□□□□ -0.38
SMARCE1-206ENST00000447024 CUEDC1Q9NWM3 386 aaPredicted RBP12.68□□□□□ -0.38
SMARCE1-206ENST00000447024 ASXL2Q76L83 1435 aa12.68□□□□□ -0.38
SMARCE1-206ENST00000447024 ABCA8O94911 1581 aa12.68□□□□□ -0.38
SMARCE1-206ENST00000447024 EFCAB5A4FU69 1503 aa12.67□□□□□ -0.38
SMARCE1-206ENST00000447024 ADAMTS2O95450 1211 aa12.66□□□□□ -0.38
SMARCE1-206ENST00000447024 GLI2P10070 1586 aa12.65□□□□□ -0.38
SMARCE1-206ENST00000447024 SUZ12Q15022 739 aaKnown RBP12.65□□□□□ -0.38
SMARCE1-206ENST00000447024 PRICKLE2Q7Z3G6 844 aa12.65□□□□□ -0.38
SMARCE1-206ENST00000447024 RNF144AP50876 292 aaPredicted RBP12.64□□□□□ -0.39
SMARCE1-206ENST00000447024 GAS6Q14393 721 aa12.64□□□□□ -0.39
SMARCE1-206ENST00000447024 ZCCHC11Q5TAX3 1644 aaKnown RBP12.63□□□□□ -0.39
SMARCE1-206ENST00000447024 ZBBXA8MT70 800 aa12.63□□□□□ -0.39
SMARCE1-206ENST00000447024 RHOQP17081 205 aa12.63□□□□□ -0.39
SMARCE1-206ENST00000447024 UBTFP17480 764 aaKnown RBP12.63□□□□□ -0.39
SMARCE1-206ENST00000447024 PCDHB9Q9Y5E1 797 aa12.63□□□□□ -0.39
SMARCE1-206ENST00000447024 ATP5J2-PTCD1G3V325 749 aa12.62□□□□□ -0.39
SMARCE1-206ENST00000447024 GIGYF1O75420 1035 aaPredicted RBP12.62□□□□□ -0.39
SMARCE1-206ENST00000447024 SRSF11Q05519 484 aaKnown RBP12.62□□□□□ -0.39
SMARCE1-206ENST00000447024 LYPD4Q6UWN0 246 aa12.62□□□□□ -0.39
SMARCE1-206ENST00000447024 TRIM52Q96A61 297 aa12.62□□□□□ -0.39
SMARCE1-206ENST00000447024 GOPCQ9HD26 462 aa12.62□□□□□ -0.39
SMARCE1-206ENST00000447024 WDR7Q9Y4E6 1490 aa12.61□□□□□ -0.39
SMARCE1-206ENST00000447024 FBXO45P0C2W1 286 aa12.61□□□□□ -0.39
SMARCE1-206ENST00000447024 IRS1P35568 1242 aa12.61□□□□□ -0.39
SMARCE1-206ENST00000447024 TMEM259Q4ZIN3 620 aa12.61□□□□□ -0.39
SMARCE1-206ENST00000447024 PCMTD1Q96MG8 357 aaPredicted RBP12.61□□□□□ -0.39
SMARCE1-206ENST00000447024 MARSP56192 900 aaKnown RBP12.6□□□□□ -0.39
SMARCE1-206ENST00000447024 ZNF837Q96EG3 531 aaPredicted RBP12.6□□□□□ -0.39
SMARCE1-206ENST00000447024 GJD4Q96KN9 370 aaPredicted RBP12.6□□□□□ -0.39
SMARCE1-206ENST00000447024 EPRSP07814 1512 aaKnown RBP12.6□□□□□ -0.39
SMARCE1-206ENST00000447024 RAPGEF6Q8TEU7 1601 aa12.58□□□□□ -0.4
SMARCE1-206ENST00000447024 MEN1O00255 615 aa12.57□□□□□ -0.4
SMARCE1-206ENST00000447024 CELA2BP08218 269 aaPredicted RBP12.57□□□□□ -0.4
SMARCE1-206ENST00000447024 GPC1P35052 558 aa12.57□□□□□ -0.4
SMARCE1-206ENST00000447024 MAP3K10Q02779 954 aa12.57□□□□□ -0.4
SMARCE1-206ENST00000447024 TRIM22Q8IYM9 498 aa12.57□□□□□ -0.4
SMARCE1-206ENST00000447024 DNMT3AQ9Y6K1 912 aaPredicted RBP12.57□□□□□ -0.4
SMARCE1-206ENST00000447024 ATP10BO94823 1461 aa12.57□□□□□ -0.4
SMARCE1-206ENST00000447024 FHOD3Q2V2M9 1422 aa12.56□□□□□ -0.4
SMARCE1-206ENST00000447024 FMN1Q68DA7 1419 aa12.56□□□□□ -0.4
SMARCE1-206ENST00000447024 A0A1W2PRU2 124 aa12.56□□□□□ -0.4
SMARCE1-206ENST00000447024 ERVK-9P63128 1117 aa12.56□□□□□ -0.4
SMARCE1-206ENST00000447024 CC2D2BQ6DHV5 1058 aa12.56□□□□□ -0.4
SMARCE1-206ENST00000447024 SCARF2Q96GP6 870 aaPredicted RBP12.56□□□□□ -0.4
SMARCE1-206ENST00000447024 TEX14Q8IWB6 1497 aa12.56□□□□□ -0.4
SMARCE1-206ENST00000447024 GPR25O00155 361 aa12.55□□□□□ -0.4
SMARCE1-206ENST00000447024 KANK3Q6NY19 840 aa12.55□□□□□ -0.4
SMARCE1-206ENST00000447024 GMCL1Q96IK5 515 aa12.55□□□□□ -0.4
SMARCE1-206ENST00000447024 MAP3K4Q9Y6R4 1608 aa12.55□□□□□ -0.4
SMARCE1-206ENST00000447024 CCDC125Q86Z20 511 aa12.54□□□□□ -0.4
SMARCE1-206ENST00000447024 MBIPQ9NS73 344 aa12.54□□□□□ -0.4
SMARCE1-206ENST00000447024 DBN1Q16643 649 aa12.53□□□□□ -0.4
SMARCE1-206ENST00000447024 RIPOR1Q6ZS17 1223 aa12.53□□□□□ -0.4
SMARCE1-206ENST00000447024 BCANQ96GW7 911 aa12.53□□□□□ -0.4
SMARCE1-206ENST00000447024 NUP153P49790 1475 aaKnown RBP12.53□□□□□ -0.4
SMARCE1-206ENST00000447024 MAGI3Q5TCQ9 1506 aa12.52□□□□□ -0.4
SMARCE1-206ENST00000447024 CFAP43Q8NDM7 1665 aa12.52□□□□□ -0.4
SMARCE1-206ENST00000447024 RANGAP1P46060 587 aaPredicted RBP12.52□□□□□ -0.41
SMARCE1-206ENST00000447024 RNF20Q5VTR2 975 aa12.52□□□□□ -0.41
SMARCE1-206ENST00000447024 GPAT2Q6NUI2 795 aa12.52□□□□□ -0.41
SMARCE1-206ENST00000447024 DYRK1BQ9Y463 629 aa12.52□□□□□ -0.41
SMARCE1-206ENST00000447024 TSPOAP1O95153 1857 aa12.52□□□□□ -0.41
SMARCE1-206ENST00000447024 ARHGAP35Q9NRY4 1499 aa12.52□□□□□ -0.41
SMARCE1-206ENST00000447024 SCTRP47872 440 aa12.51□□□□□ -0.41
SMARCE1-206ENST00000447024 POU4F2Q12837 409 aa12.51□□□□□ -0.41
SMARCE1-206ENST00000447024 CD109Q6YHK3 1445 aa12.51□□□□□ -0.41
SMARCE1-206ENST00000447024 KDM6BO15054 1643 aa12.51□□□□□ -0.41
SMARCE1-206ENST00000447024 PLEKHD1A6NEE1 506 aa12.5□□□□□ -0.41
SMARCE1-206ENST00000447024 SLC27A3Q5K4L6 730 aa12.5□□□□□ -0.41
SMARCE1-206ENST00000447024 FOXR1Q6PIV2 292 aa12.5□□□□□ -0.41
SMARCE1-206ENST00000447024 CYP2U1Q7Z449 544 aa12.5□□□□□ -0.41
SMARCE1-206ENST00000447024 NLRP3Q96P20 1036 aa12.5□□□□□ -0.41
SMARCE1-206ENST00000447024 PHLDB1Q86UU1 1377 aa12.5□□□□□ -0.41
SMARCE1-206ENST00000447024 PPRC1Q5VV67 1664 aaKnown RBP12.5□□□□□ -0.41
SMARCE1-206ENST00000447024 NR1H3Q13133 447 aa12.49□□□□□ -0.41
SMARCE1-206ENST00000447024 GTPBP3Q969Y2 492 aaKnown RBP12.49□□□□□ -0.41
SMARCE1-206ENST00000447024 GAS2L1Q99501 681 aaPredicted RBP12.49□□□□□ -0.41
SMARCE1-206ENST00000447024 GRIP2Q9C0E4 1043 aa12.49□□□□□ -0.41
SMARCE1-206ENST00000447024 ENAMQ9NRM1 1142 aa12.49□□□□□ -0.41
SMARCE1-206ENST00000447024 H7C1W4 665 aa12.48□□□□□ -0.41
SMARCE1-206ENST00000447024 CLN3Q13286 438 aa12.48□□□□□ -0.41
SMARCE1-206ENST00000447024 PCDHB11Q9Y5F2 797 aa12.48□□□□□ -0.41
SMARCE1-206ENST00000447024 IGHA1P01876 353 aa12.47□□□□□ -0.41
SMARCE1-206ENST00000447024 MCCD1P59942 119 aaPredicted RBP12.47□□□□□ -0.41
SMARCE1-206ENST00000447024 NBPF10Q6P3W6 841 aaKnown RBP12.47□□□□□ -0.41
SMARCE1-206ENST00000447024 NBPF15Q8N660 670 aa12.47□□□□□ -0.41
SMARCE1-206ENST00000447024 IL27Q8NEV9 243 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms