RNA–Protein interactions for RNA: ENST00000446851.6

LIN54-203, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 4,083 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-203ENST00000446851 DNAJC10Q8IXB1 793 aa13.27□□□□□ -0.29
LIN54-203ENST00000446851 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.27□□□□□ -0.295e-8■□□□□ 10.8
LIN54-203ENST00000446851 OVOS2A0A0G2JMS6 1433 aa13.27□□□□□ -0.29
LIN54-203ENST00000446851 R3HDM1Q15032 1099 aaKnown RBP13.27□□□□□ -0.29
LIN54-203ENST00000446851 MYH16Q9H6N6 1097 aa13.27□□□□□ -0.29
LIN54-203ENST00000446851 ALS2Q96Q42 1657 aa13.27□□□□□ -0.29
LIN54-203ENST00000446851 RGS12O14924 1447 aa13.26□□□□□ -0.29
LIN54-203ENST00000446851 LOC102724428A0A0B4J2F2 783 aa13.26□□□□□ -0.29
LIN54-203ENST00000446851 SIK1P57059 783 aa13.26□□□□□ -0.29
LIN54-203ENST00000446851 TXNRD1Q16881 649 aa13.26□□□□□ -0.29
LIN54-203ENST00000446851 RTL5Q5HYW3 569 aaPredicted RBP13.26□□□□□ -0.29
LIN54-203ENST00000446851 SMARCC1Q92922 1105 aaPredicted RBP13.26□□□□□ -0.29
LIN54-203ENST00000446851 STK31Q9BXU1 1019 aa13.26□□□□□ -0.29
LIN54-203ENST00000446851 MSL1Q68DK7 614 aa13.26□□□□□ -0.29
LIN54-203ENST00000446851 ZNF790Q6PG37 636 aa13.26□□□□□ -0.29
LIN54-203ENST00000446851 FMNL2Q96PY5 1086 aa13.26□□□□□ -0.29
LIN54-203ENST00000446851 KIF20BQ96Q89 1820 aa13.26□□□□□ -0.29
LIN54-203ENST00000446851 STARD3NLO95772 234 aa13.25□□□□□ -0.29
LIN54-203ENST00000446851 HDGFL1Q5TGJ6 251 aa13.25□□□□□ -0.29
LIN54-203ENST00000446851 EXOSC9Q06265 439 aaKnown RBP13.25□□□□□ -0.29
LIN54-203ENST00000446851 SLC4A10Q6U841 1118 aa13.25□□□□□ -0.29
LIN54-203ENST00000446851 STK32BQ9NY57 414 aa13.25□□□□□ -0.29
LIN54-203ENST00000446851 PRAMEF22A3QJZ6 481 aa13.25□□□□□ -0.29
LIN54-203ENST00000446851 PLEKHF1Q96S99 279 aa13.25□□□□□ -0.29
LIN54-203ENST00000446851 ERVV-2B6SEH9 535 aa13.24□□□□□ -0.29
LIN54-203ENST00000446851 UPF1Q92900 1129 aaKnown RBP eCLIP13.24□□□□□ -0.29
LIN54-203ENST00000446851 A1BGP04217 495 aa13.24□□□□□ -0.29
LIN54-203ENST00000446851 TBC1D2BQ9UPU7 963 aa13.24□□□□□ -0.29
LIN54-203ENST00000446851 PELP1Q8IZL8 1130 aaKnown RBP13.24□□□□□ -0.29
LIN54-203ENST00000446851 PALLDQ8WX93 1383 aa13.23□□□□□ -0.29
LIN54-203ENST00000446851 MBIPQ9NS73 344 aa13.23□□□□□ -0.29
LIN54-203ENST00000446851 ATG3Q9NT62 314 aa13.23□□□□□ -0.29
LIN54-203ENST00000446851 ATF5Q9Y2D1 282 aaPredicted RBP13.23□□□□□ -0.29
LIN54-203ENST00000446851 COL14A1Q05707 1796 aaKnown RBP13.23□□□□□ -0.29
LIN54-203ENST00000446851 SHPRHQ149N8 1683 aa13.23□□□□□ -0.29
LIN54-203ENST00000446851 TRIM35Q9UPQ4 493 aa13.23□□□□□ -0.29
LIN54-203ENST00000446851 CLUAP1Q96AJ1 413 aa13.22□□□□□ -0.29
LIN54-203ENST00000446851 LTN1O94822 1766 aa13.22□□□□□ -0.29
LIN54-203ENST00000446851 ONECUT3O60422 494 aaPredicted RBP13.22□□□□□ -0.29
LIN54-203ENST00000446851 ZBTB7AO95365 584 aa13.22□□□□□ -0.29
LIN54-203ENST00000446851 RFC4P35249 363 aa13.22□□□□□ -0.29
LIN54-203ENST00000446851 DUSP27Q5VZP5 1158 aa13.22□□□□□ -0.29
LIN54-203ENST00000446851 USP16Q9Y5T5 823 aa13.22□□□□□ -0.29
LIN54-203ENST00000446851 TWISTNBQ3B726 338 aaPredicted RBP13.21□□□□□ -0.29
LIN54-203ENST00000446851 SMC4Q9NTJ3 1288 aa13.21□□□□□ -0.29
LIN54-203ENST00000446851 PHRF1Q9P1Y6 1649 aaKnown RBP13.21□□□□□ -0.29
LIN54-203ENST00000446851 ZBTB3Q9H5J0 574 aa13.21□□□□□ -0.29
LIN54-203ENST00000446851 ZPR1O75312 459 aa13.21□□□□□ -0.3
LIN54-203ENST00000446851 SNRPA1P09661 255 aaKnown RBP13.21□□□□□ -0.3
LIN54-203ENST00000446851 RTCBQ9Y3I0 505 aaKnown RBP13.21□□□□□ -0.3
LIN54-203ENST00000446851 RGPD5Q99666 1765 aa13.2□□□□□ -0.3
LIN54-203ENST00000446851 IRX6P78412 446 aaPredicted RBP13.2□□□□□ -0.3
LIN54-203ENST00000446851 FKBP5Q13451 457 aaPredicted RBP13.19□□□□□ -0.3
LIN54-203ENST00000446851 CFAP44Q96MT7 982 aa13.19□□□□□ -0.3
LIN54-203ENST00000446851 CENPBP07199 599 aaPredicted RBP13.19□□□□□ -0.3
LIN54-203ENST00000446851 SPINK5Q9NQ38 1064 aaPredicted RBP13.19□□□□□ -0.3
LIN54-203ENST00000446851 SLC4A2P04920 1241 aa13.19□□□□□ -0.3
LIN54-203ENST00000446851 GPTP24298 496 aa13.19□□□□□ -0.3
LIN54-203ENST00000446851 CCDC24Q8N4L8 307 aa13.19□□□□□ -0.3
LIN54-203ENST00000446851 TSPYL6Q8N831 410 aa13.19□□□□□ -0.3
LIN54-203ENST00000446851 KDRP35968 1356 aa13.19□□□□□ -0.3
LIN54-203ENST00000446851 C8orf58Q8NAV2 365 aa13.18□□□□□ -0.3
LIN54-203ENST00000446851 TNS2Q63HR2 1409 aa13.18□□□□□ -0.3
LIN54-203ENST00000446851 E9PSI1 815 aa13.18□□□□□ -0.3
LIN54-203ENST00000446851 RIC3Q7Z5B4 369 aa13.18□□□□□ -0.3
LIN54-203ENST00000446851 PEAK1Q9H792 1746 aa13.18□□□□□ -0.3
LIN54-203ENST00000446851 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.18□□□□□ -0.3
LIN54-203ENST00000446851 TRAPPC3LQ5T215 181 aa13.17□□□□□ -0.3
LIN54-203ENST00000446851 ZBTB1Q9Y2K1 713 aa13.17□□□□□ -0.3
LIN54-203ENST00000446851 CRKLP46109 303 aaKnown RBP13.17□□□□□ -0.3
LIN54-203ENST00000446851 HTATSF1O43719 755 aaKnown RBP13.16□□□□□ -0.3
LIN54-203ENST00000446851 FANCIQ9NVI1 1328 aa13.16□□□□□ -0.3
LIN54-203ENST00000446851 CHPF2Q9P2E5 772 aa13.16□□□□□ -0.3
LIN54-203ENST00000446851 KIF6Q6ZMV9 814 aa13.16□□□□□ -0.3
LIN54-203ENST00000446851 IFT57Q9NWB7 429 aa13.16□□□□□ -0.3
LIN54-203ENST00000446851 LRRC4BQ9NT99 713 aa13.15□□□□□ -0.3
LIN54-203ENST00000446851 SOCS7O14512 581 aa13.15□□□□□ -0.3
LIN54-203ENST00000446851 ITPK1Q13572 414 aa13.15□□□□□ -0.3
LIN54-203ENST00000446851 FTSJ3Q8IY81 847 aaKnown RBP13.15□□□□□ -0.3
LIN54-203ENST00000446851 CHMP3Q9Y3E7 222 aa13.15□□□□□ -0.3
LIN54-203ENST00000446851 CCDC30Q5VVM6 783 aa13.14□□□□□ -0.31
LIN54-203ENST00000446851 PLCH1Q4KWH8 1693 aa13.14□□□□□ -0.31
LIN54-203ENST00000446851 JARID2Q92833 1246 aaPredicted RBP13.14□□□□□ -0.31
LIN54-203ENST00000446851 CCDC87Q9NVE4 849 aa13.14□□□□□ -0.31
LIN54-203ENST00000446851 SRP68Q9UHB9 627 aaKnown RBP13.14□□□□□ -0.31
LIN54-203ENST00000446851 GLI3P10071 1580 aa13.14□□□□□ -0.31
LIN54-203ENST00000446851 EIF4A1P60842 406 aaKnown RBP13.14□□□□□ -0.31
LIN54-203ENST00000446851 WDR63Q8IWG1 891 aa13.14□□□□□ -0.31
LIN54-203ENST00000446851 ATP5J2-PTCD1G3V325 749 aa13.13□□□□□ -0.31
LIN54-203ENST00000446851 COPS6Q7L5N1 327 aa13.13□□□□□ -0.31
LIN54-203ENST00000446851 CCDC125Q86Z20 511 aa13.13□□□□□ -0.31
LIN54-203ENST00000446851 CCDC85AQ96PX6 553 aaPredicted RBP13.13□□□□□ -0.31
LIN54-203ENST00000446851 COL22A1Q8NFW1 1626 aaPredicted RBP13.13□□□□□ -0.31
LIN54-203ENST00000446851 PLIN1O60240 522 aa13.13□□□□□ -0.31
LIN54-203ENST00000446851 NKX1-1Q15270 411 aaPredicted RBP13.13□□□□□ -0.31
LIN54-203ENST00000446851 ZNF219Q9P2Y4 722 aaPredicted RBP13.13□□□□□ -0.31
LIN54-203ENST00000446851 DZIP3Q86Y13 1208 aaKnown RBP13.13□□□□□ -0.31
LIN54-203ENST00000446851 TEX13AQ9BXU3 409 aaPredicted RBP13.13□□□□□ -0.31
LIN54-203ENST00000446851 LINC00116Q8NCU8 138 aa13.13□□□□□ -0.31
LIN54-203ENST00000446851 PDGFDQ9GZP0 370 aaPredicted RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms