RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 ANO6Q4KMQ2 910 aa9.19□□□□□ -0.94
SMG1-202ENST00000446231 FSIP1Q8NA03 581 aa9.19□□□□□ -0.94
SMG1-202ENST00000446231 EIF2S2P20042 333 aaKnown RBP9.19□□□□□ -0.94
SMG1-202ENST00000446231 TDO2P48775 406 aa9.19□□□□□ -0.94
SMG1-202ENST00000446231 ATP2B3Q16720 1220 aa9.19□□□□□ -0.94
SMG1-202ENST00000446231 CWC27Q6UX04 472 aaKnown RBP9.19□□□□□ -0.94
SMG1-202ENST00000446231 BRPF1P55201 1214 aaPredicted RBP9.19□□□□□ -0.94
SMG1-202ENST00000446231 LIG1P18858 919 aa9.19□□□□□ -0.94
SMG1-202ENST00000446231 BLOC1S2Q6QNY1 142 aa9.19□□□□□ -0.94
SMG1-202ENST00000446231 ZBTB40Q9NUA8 1239 aa9.18□□□□□ -0.94
SMG1-202ENST00000446231 VPS18Q9P253 973 aa9.18□□□□□ -0.94
SMG1-202ENST00000446231 MAP4K4O95819 1239 aaPredicted RBP9.18□□□□□ -0.94
SMG1-202ENST00000446231 KRT32Q14532 448 aa9.18□□□□□ -0.94
SMG1-202ENST00000446231 EFCC1Q9HA90 598 aa9.18□□□□□ -0.94
SMG1-202ENST00000446231 LTV1Q96GA3 475 aaPredicted RBP9.18□□□□□ -0.94
SMG1-202ENST00000446231 INTS4Q96HW7 963 aaKnown RBP9.18□□□□□ -0.94
SMG1-202ENST00000446231 FCHSD2O94868 740 aa9.18□□□□□ -0.94
SMG1-202ENST00000446231 ATP2B1P20020 1258 aa9.18□□□□□ -0.94
SMG1-202ENST00000446231 ERLIN2O94905 339 aa9.18□□□□□ -0.94
SMG1-202ENST00000446231 RBM28Q9NW13 759 aaKnown RBP9.18□□□□□ -0.94
SMG1-202ENST00000446231 PARD3Q8TEW0 1356 aa9.18□□□□□ -0.94
SMG1-202ENST00000446231 TRDNQ13061 729 aa9.17□□□□□ -0.94
SMG1-202ENST00000446231 FYCO1Q9BQS8 1478 aa9.17□□□□□ -0.94
SMG1-202ENST00000446231 AMPHP49418 695 aa9.17□□□□□ -0.94
SMG1-202ENST00000446231 DACH1Q9UI36 760 aa9.17□□□□□ -0.94
SMG1-202ENST00000446231 NUTM1Q86Y26 1132 aa9.17□□□□□ -0.94
SMG1-202ENST00000446231 PRXQ9BXM0 1461 aa9.17□□□□□ -0.94
SMG1-202ENST00000446231 KIF3BO15066 747 aa9.17□□□□□ -0.94
SMG1-202ENST00000446231 SYT1P21579 422 aa9.17□□□□□ -0.94
SMG1-202ENST00000446231 PPM1EQ8WY54 764 aa9.17□□□□□ -0.94
SMG1-202ENST00000446231 MAGEC2Q9UBF1 373 aaPredicted RBP9.17□□□□□ -0.94
SMG1-202ENST00000446231 CFTRP13569 1480 aa9.17□□□□□ -0.94
SMG1-202ENST00000446231 HDGFP51858 240 aaKnown RBP9.17□□□□□ -0.94
SMG1-202ENST00000446231 DNAJC21Q5F1R6 531 aaKnown RBP9.17□□□□□ -0.94
SMG1-202ENST00000446231 PIP4K2AP48426 406 aaPredicted RBP9.17□□□□□ -0.94
SMG1-202ENST00000446231 NFE2L2Q16236 605 aa9.17□□□□□ -0.94
SMG1-202ENST00000446231 ZSCAN26Q16670 478 aa9.16□□□□□ -0.94
SMG1-202ENST00000446231 DDX54Q8TDD1 881 aaKnown RBP9.16□□□□□ -0.94
SMG1-202ENST00000446231 MAP2K2P36507 400 aa9.16□□□□□ -0.94
SMG1-202ENST00000446231 TUBB4BP68371 445 aa9.16□□□□□ -0.94
SMG1-202ENST00000446231 MINK1Q8N4C8 1332 aaPredicted RBP9.16□□□□□ -0.94
SMG1-202ENST00000446231 GPT2Q8TD30 523 aa9.16□□□□□ -0.94
SMG1-202ENST00000446231 SLC3A2P08195 630 aaKnown RBP9.16□□□□□ -0.94
SMG1-202ENST00000446231 AACSQ86V21 672 aa9.16□□□□□ -0.94
SMG1-202ENST00000446231 SCAPERQ9BY12 1400 aa9.16□□□□□ -0.94
SMG1-202ENST00000446231 BIN1O00499 593 aa9.16□□□□□ -0.94
SMG1-202ENST00000446231 GGT6Q6P531 493 aa9.16□□□□□ -0.94
SMG1-202ENST00000446231 CEP57Q86XR8 500 aa9.16□□□□□ -0.94
SMG1-202ENST00000446231 ANAPC15P60006 121 aa9.16□□□□□ -0.94
SMG1-202ENST00000446231 MICALL1Q8N3F8 863 aa9.16□□□□□ -0.94
SMG1-202ENST00000446231 THUMPD2Q9BTF0 503 aaKnown RBP9.16□□□□□ -0.94
SMG1-202ENST00000446231 OTUD6BQ8N6M0 293 aa9.16□□□□□ -0.94
SMG1-202ENST00000446231 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.16□□□□□ -0.941e-6■■□□□ 14.1
SMG1-202ENST00000446231 CCDC30Q5VVM6 783 aa9.15□□□□□ -0.94
SMG1-202ENST00000446231 SPTLC3Q9NUV7 552 aa9.15□□□□□ -0.94
SMG1-202ENST00000446231 TUBBP07437 444 aa9.15□□□□□ -0.94
SMG1-202ENST00000446231 PLEKHM2Q8IWE5 1019 aa9.15□□□□□ -0.94
SMG1-202ENST00000446231 PPP2R3AQ06190 1150 aa9.15□□□□□ -0.94
SMG1-202ENST00000446231 MYO6Q9UM54 1294 aa9.15□□□□□ -0.94
SMG1-202ENST00000446231 VGFO15240 615 aaPredicted RBP9.15□□□□□ -0.94
SMG1-202ENST00000446231 RAB11FIP3O75154 756 aa9.15□□□□□ -0.94
SMG1-202ENST00000446231 GTF2E1P29083 439 aaPredicted RBP9.15□□□□□ -0.94
SMG1-202ENST00000446231 KIAA1328Q86T90 577 aa9.15□□□□□ -0.94
SMG1-202ENST00000446231 DNAJC25Q9H1X3 360 aa9.15□□□□□ -0.94
SMG1-202ENST00000446231 TSHZ3Q63HK5 1081 aa9.15□□□□□ -0.94
SMG1-202ENST00000446231 NBPF11Q86T75 865 aa9.15□□□□□ -0.94
SMG1-202ENST00000446231 CCDC47Q96A33 483 aaKnown RBP9.15□□□□□ -0.94
SMG1-202ENST00000446231 LARP6Q9BRS8 491 aaKnown RBP9.15□□□□□ -0.94
SMG1-202ENST00000446231 B4GALNT4Q76KP1 1039 aa9.15□□□□□ -0.95
SMG1-202ENST00000446231 CUX1P39880 1505 aa9.15□□□□□ -0.95
SMG1-202ENST00000446231 DHX37Q8IY37 1157 aaKnown RBP9.15□□□□□ -0.95
SMG1-202ENST00000446231 CTAGE15A4D2H0 777 aa9.15□□□□□ -0.95
SMG1-202ENST00000446231 CTAGE8P0CG41 777 aa9.15□□□□□ -0.95
SMG1-202ENST00000446231 CTAGE6Q86UF2 777 aa9.15□□□□□ -0.95
SMG1-202ENST00000446231 CTAGE4Q8IX94 777 aa9.15□□□□□ -0.95
SMG1-202ENST00000446231 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.15□□□□□ -0.95
SMG1-202ENST00000446231 EIF5P55010 431 aaKnown RBP9.14□□□□□ -0.95
SMG1-202ENST00000446231 CCDC121Q6ZUS5 278 aa9.14□□□□□ -0.95
SMG1-202ENST00000446231 RALYLQ86SE5 291 aaKnown RBP9.14□□□□□ -0.95
SMG1-202ENST00000446231 IL16Q14005 1332 aa9.14□□□□□ -0.95
SMG1-202ENST00000446231 GADD45BO75293 160 aaPredicted RBP9.14□□□□□ -0.95
SMG1-202ENST00000446231 IRX5P78411 483 aaPredicted RBP9.14□□□□□ -0.95
SMG1-202ENST00000446231 TMEM63CQ9P1W3 806 aa9.14□□□□□ -0.95
SMG1-202ENST00000446231 LRCH2Q5VUJ6 765 aa9.14□□□□□ -0.95
SMG1-202ENST00000446231 GOLGA5Q8TBA6 731 aa9.14□□□□□ -0.95
SMG1-202ENST00000446231 CLNS1AP54105 237 aaKnown RBP9.14□□□□□ -0.95
SMG1-202ENST00000446231 GBP6Q6ZN66 633 aa9.14□□□□□ -0.95
SMG1-202ENST00000446231 CFAP70Q5T0N1 1121 aa9.14□□□□□ -0.95
SMG1-202ENST00000446231 GJB2P29033 226 aa9.14□□□□□ -0.95
SMG1-202ENST00000446231 IMMTQ16891 758 aaKnown RBP9.14□□□□□ -0.95
SMG1-202ENST00000446231 HSPA4P34932 840 aa9.13□□□□□ -0.95
SMG1-202ENST00000446231 LMOD2Q6P5Q4 547 aa9.13□□□□□ -0.95
SMG1-202ENST00000446231 PIP4K2BP78356 416 aa9.13□□□□□ -0.95
SMG1-202ENST00000446231 ARHGAP45Q92619 1136 aa9.13□□□□□ -0.95
SMG1-202ENST00000446231 SPINK5Q9NQ38 1064 aaPredicted RBP9.13□□□□□ -0.95
SMG1-202ENST00000446231 DACT1Q9NYF0 836 aa9.13□□□□□ -0.95
SMG1-202ENST00000446231 DNM1Q05193 864 aaKnown RBP9.13□□□□□ -0.95
SMG1-202ENST00000446231 ZSCAN25Q6NSZ9 544 aa9.13□□□□□ -0.95
SMG1-202ENST00000446231 SCLT1Q96NL6 688 aa9.13□□□□□ -0.95
SMG1-202ENST00000446231 F13A1P00488 732 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms