RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 MX1P20591 662 aa16.83■□□□□ 0.28
VPS52-212ENST00000445902 MCCP23508 829 aa16.83■□□□□ 0.28
VPS52-212ENST00000445902 BBXQ8WY36 941 aaPredicted RBP16.83■□□□□ 0.28
VPS52-212ENST00000445902 WDR33Q9C0J8 1336 aaKnown RBP16.83■□□□□ 0.28
VPS52-212ENST00000445902 KIAA1524Q8TCG1 905 aa16.83■□□□□ 0.28
VPS52-212ENST00000445902 ZNF771Q7L3S4 317 aaPredicted RBP16.82■□□□□ 0.28
VPS52-212ENST00000445902 INTS4Q96HW7 963 aaKnown RBP16.82■□□□□ 0.28
VPS52-212ENST00000445902 F6X3S4 739 aa16.81■□□□□ 0.28
VPS52-212ENST00000445902 VGFO15240 615 aaPredicted RBP16.81■□□□□ 0.28
VPS52-212ENST00000445902 DIAPH3Q9NSV4 1193 aa16.81■□□□□ 0.28
VPS52-212ENST00000445902 RIMS2Q9UQ26 1411 aa16.81■□□□□ 0.28
VPS52-212ENST00000445902 CGNQ9P2M7 1197 aaKnown RBP16.8■□□□□ 0.28
VPS52-212ENST00000445902 NAA30Q147X3 362 aaPredicted RBP16.8■□□□□ 0.28
VPS52-212ENST00000445902 IL25Q9H293 177 aa16.8■□□□□ 0.28
VPS52-212ENST00000445902 ZRANB1Q9UGI0 708 aa16.8■□□□□ 0.28
VPS52-212ENST00000445902 CHMP3Q9Y3E7 222 aa16.8■□□□□ 0.28
VPS52-212ENST00000445902 RGS12O14924 1447 aa16.8■□□□□ 0.28
VPS52-212ENST00000445902 RPAP1Q9BWH6 1393 aaPredicted RBP16.8■□□□□ 0.28
VPS52-212ENST00000445902 ABCC3O15438 1527 aa16.8■□□□□ 0.28
VPS52-212ENST00000445902 KIF20BQ96Q89 1820 aa16.8■□□□□ 0.28
VPS52-212ENST00000445902 YEATS2Q9ULM3 1422 aa16.79■□□□□ 0.28
VPS52-212ENST00000445902 UNC5CLQ8IV45 518 aa16.79■□□□□ 0.28
VPS52-212ENST00000445902 ANKRD7Q92527 254 aa16.79■□□□□ 0.28
VPS52-212ENST00000445902 CDK19Q9BWU1 502 aa16.79■□□□□ 0.28
VPS52-212ENST00000445902 ZBTB22O15209 634 aa16.79■□□□□ 0.28
VPS52-212ENST00000445902 PTGS1P23219 599 aa16.79■□□□□ 0.28
VPS52-212ENST00000445902 CHMLP26374 656 aa16.78■□□□□ 0.28
VPS52-212ENST00000445902 RPGRIP1LQ68CZ1 1315 aa16.78■□□□□ 0.28
VPS52-212ENST00000445902 ZFYVE9O95405 1425 aa16.78■□□□□ 0.28
VPS52-212ENST00000445902 MAP4K4O95819 1239 aaPredicted RBP16.78■□□□□ 0.28
VPS52-212ENST00000445902 C16orf45Q96MC5 204 aaPredicted RBP16.78■□□□□ 0.28
VPS52-212ENST00000445902 KIF24Q5T7B8 1368 aa16.78■□□□□ 0.28
VPS52-212ENST00000445902 RRS1Q15050 365 aaKnown RBP16.77■□□□□ 0.28
VPS52-212ENST00000445902 CDC42BPGQ6DT37 1551 aa16.77■□□□□ 0.28
VPS52-212ENST00000445902 HMMRO75330 724 aa16.77■□□□□ 0.28
VPS52-212ENST00000445902 IL13P35225 146 aa16.77■□□□□ 0.28
VPS52-212ENST00000445902 MCM10Q7L590 875 aa16.77■□□□□ 0.28
VPS52-212ENST00000445902 SLC4A2P04920 1241 aa16.77■□□□□ 0.27
VPS52-212ENST00000445902 UBE2HP62256 183 aa16.77■□□□□ 0.27
VPS52-212ENST00000445902 NCBP1Q09161 790 aaKnown RBP16.77■□□□□ 0.27
VPS52-212ENST00000445902 MIS18AQ9NYP9 233 aa16.77■□□□□ 0.27
VPS52-212ENST00000445902 ZSCAN22P10073 491 aaPredicted RBP16.76■□□□□ 0.27
VPS52-212ENST00000445902 GTF2E1P29083 439 aaPredicted RBP16.76■□□□□ 0.27
VPS52-212ENST00000445902 LRMPQ12912 555 aa16.76■□□□□ 0.27
VPS52-212ENST00000445902 OSBPL3Q9H4L5 887 aa16.76■□□□□ 0.27
VPS52-212ENST00000445902 KIDINS220Q9ULH0 1771 aa16.76■□□□□ 0.27
VPS52-212ENST00000445902 YTHDC2Q9H6S0 1430 aaKnown RBP16.75■□□□□ 0.27
VPS52-212ENST00000445902 SYT1P21579 422 aa16.75■□□□□ 0.27
VPS52-212ENST00000445902 LMOD3Q0VAK6 560 aa16.75■□□□□ 0.27
VPS52-212ENST00000445902 CPA1P15085 419 aa16.75■□□□□ 0.27
VPS52-212ENST00000445902 G2E3Q7L622 706 aa16.75■□□□□ 0.27
VPS52-212ENST00000445902 FUCA2Q9BTY2 467 aa16.75■□□□□ 0.27
VPS52-212ENST00000445902 CTIFO43310 598 aaKnown RBP16.74■□□□□ 0.27
VPS52-212ENST00000445902 STX6O43752 255 aa16.74■□□□□ 0.27
VPS52-212ENST00000445902 DNM1Q05193 864 aaKnown RBP16.74■□□□□ 0.27
VPS52-212ENST00000445902 NME9Q86XW9 330 aa16.74■□□□□ 0.27
VPS52-212ENST00000445902 ANAPC15P60006 121 aa16.74■□□□□ 0.27
VPS52-212ENST00000445902 AEBP1Q8IUX7 1158 aa16.74■□□□□ 0.27
VPS52-212ENST00000445902 TMEM87AQ8NBN3 555 aa16.74■□□□□ 0.27
VPS52-212ENST00000445902 CAMK4Q16566 473 aa16.74■□□□□ 0.27
VPS52-212ENST00000445902 DRC7Q8IY82 874 aa16.73■□□□□ 0.27
VPS52-212ENST00000445902 LRRCC1Q9C099 1032 aa16.73■□□□□ 0.27
VPS52-212ENST00000445902 NEXMIFQ5QGS0 1516 aa16.73■□□□□ 0.27
VPS52-212ENST00000445902 F13A1P00488 732 aa16.73■□□□□ 0.27
VPS52-212ENST00000445902 NRBP1Q9UHY1 535 aa16.73■□□□□ 0.27
VPS52-212ENST00000445902 LUZP1Q86V48 1076 aa16.72■□□□□ 0.27
VPS52-212ENST00000445902 IL1RAPL2Q9NP60 686 aa16.72■□□□□ 0.27
VPS52-212ENST00000445902 ABCA9Q8IUA7 1624 aa16.72■□□□□ 0.27
VPS52-212ENST00000445902 GOLGA6L6A8MZA4 724 aa16.72■□□□□ 0.27
VPS52-212ENST00000445902 CCDC186Q7Z3E2 898 aa16.72■□□□□ 0.27
VPS52-212ENST00000445902 LMTK2Q8IWU2 1503 aa16.72■□□□□ 0.27
VPS52-212ENST00000445902 PNMA6EA0A0J9YXQ4 647 aa16.71■□□□□ 0.27
VPS52-212ENST00000445902 VGLL3A8MV65 326 aa16.71■□□□□ 0.27
VPS52-212ENST00000445902 AK2P54819 239 aa16.71■□□□□ 0.27
VPS52-212ENST00000445902 ZNF592Q92610 1267 aa16.71■□□□□ 0.27
VPS52-212ENST00000445902 OGFRQ9NZT2 677 aa16.71■□□□□ 0.27
VPS52-212ENST00000445902 SMC3Q9UQE7 1217 aa16.71■□□□□ 0.27
VPS52-212ENST00000445902 PTPRMP28827 1452 aa16.71■□□□□ 0.27
VPS52-212ENST00000445902 LARGE1O95461 756 aa16.71■□□□□ 0.27
VPS52-212ENST00000445902 SIGLEC1Q9BZZ2 1709 aa16.71■□□□□ 0.26
VPS52-212ENST00000445902 CTNNA3Q9UI47 895 aa16.71■□□□□ 0.26
VPS52-212ENST00000445902 FEZ1Q99689 392 aa16.7■□□□□ 0.26
VPS52-212ENST00000445902 TUBGCP6Q96RT7 1819 aa16.7■□□□□ 0.26
VPS52-212ENST00000445902 ARAP3Q8WWN8 1544 aa16.7■□□□□ 0.26
VPS52-212ENST00000445902 SALL3Q9BXA9 1300 aa16.7■□□□□ 0.26
VPS52-212ENST00000445902 VPS37CA5D8V6 355 aaPredicted RBP16.7■□□□□ 0.26
VPS52-212ENST00000445902 IDI1Q13907 227 aa16.7■□□□□ 0.26
VPS52-212ENST00000445902 NUTM1Q86Y26 1132 aa16.7■□□□□ 0.26
VPS52-212ENST00000445902 DDX54Q8TDD1 881 aaKnown RBP16.7■□□□□ 0.26
VPS52-212ENST00000445902 RUFY3Q7L099 469 aa16.69■□□□□ 0.26
VPS52-212ENST00000445902 CCDC83Q8IWF9 413 aa16.69■□□□□ 0.26
VPS52-212ENST00000445902 CKAP2LQ8IYA6 745 aa16.69■□□□□ 0.26
VPS52-212ENST00000445902 TMEM51Q9NW97 253 aa16.69■□□□□ 0.26
VPS52-212ENST00000445902 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.69■□□□□ 0.26
VPS52-212ENST00000445902 V9GYY5 206 aaPredicted RBP16.69■□□□□ 0.26
VPS52-212ENST00000445902 PTPRCP08575 1304 aa16.69■□□□□ 0.26
VPS52-212ENST00000445902 CCDC192P0DO97 292 aa16.69■□□□□ 0.26
VPS52-212ENST00000445902 TNNT1P13805 278 aa16.69■□□□□ 0.26
VPS52-212ENST00000445902 MAPK8IP2Q13387 824 aaPredicted RBP16.69■□□□□ 0.26
VPS52-212ENST00000445902 RASEFQ8IZ41 740 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms