RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 RBM42Q9BTD8 480 aaKnown RBP19.78■□□□□ 0.76
TCOF1-206ENST00000445265 NUP62CLQ9H1M0 184 aa19.78■□□□□ 0.76
TCOF1-206ENST00000445265 PIK3R4Q99570 1358 aa19.78■□□□□ 0.76
TCOF1-206ENST00000445265 ERVK-7P63135 1459 aa19.78■□□□□ 0.76
TCOF1-206ENST00000445265 SAFBQ15424 915 aaKnown RBP eCLIP19.78■□□□□ 0.76
TCOF1-206ENST00000445265 TPD52L1Q16890 204 aaPredicted RBP19.78■□□□□ 0.76
TCOF1-206ENST00000445265 TTC21AQ8NDW8 1320 aa19.78■□□□□ 0.76
TCOF1-206ENST00000445265 TPM1P09493 284 aa19.77■□□□□ 0.76
TCOF1-206ENST00000445265 STK3Q13188 491 aa19.77■□□□□ 0.76
TCOF1-206ENST00000445265 PLEKHM2Q8IWE5 1019 aa19.77■□□□□ 0.76
TCOF1-206ENST00000445265 SPG7Q9UQ90 795 aa19.77■□□□□ 0.76
TCOF1-206ENST00000445265 PLXNC1O60486 1568 aa19.77■□□□□ 0.76
TCOF1-206ENST00000445265 ANAPC15P60006 121 aa19.77■□□□□ 0.76
TCOF1-206ENST00000445265 AMOTQ4VCS5 1084 aa19.77■□□□□ 0.76
TCOF1-206ENST00000445265 SPATA32Q96LK8 384 aa19.77■□□□□ 0.76
TCOF1-206ENST00000445265 TTC37Q6PGP7 1564 aa19.77■□□□□ 0.76
TCOF1-206ENST00000445265 GTF2E1P29083 439 aaPredicted RBP19.77■□□□□ 0.75
TCOF1-206ENST00000445265 ANKLE2Q86XL3 938 aa19.77■□□□□ 0.75
TCOF1-206ENST00000445265 SPC24Q8NBT2 197 aa19.77■□□□□ 0.75
TCOF1-206ENST00000445265 PANK2Q9BZ23 570 aa19.77■□□□□ 0.75
TCOF1-206ENST00000445265 UHRF1BP1LA0JNW5 1464 aa19.77■□□□□ 0.75
TCOF1-206ENST00000445265 PRPF40BQ6NWY9 871 aaKnown RBP19.76■□□□□ 0.75
TCOF1-206ENST00000445265 CCDC83Q8IWF9 413 aa19.76■□□□□ 0.75
TCOF1-206ENST00000445265 CEP85Q6P2H3 762 aa19.76■□□□□ 0.75
TCOF1-206ENST00000445265 TMX3Q96JJ7 454 aa19.76■□□□□ 0.75
TCOF1-206ENST00000445265 DBF4Q9UBU7 674 aaPredicted RBP19.76■□□□□ 0.75
TCOF1-206ENST00000445265 FBXW7Q969H0 707 aa19.76■□□□□ 0.75
TCOF1-206ENST00000445265 CFAP45Q9UL16 551 aa19.76■□□□□ 0.75
TCOF1-206ENST00000445265 UQCRHLA0A096LP55 91 aa19.76■□□□□ 0.75
TCOF1-206ENST00000445265 UQCRHP07919 91 aa19.76■□□□□ 0.75
TCOF1-206ENST00000445265 RBM10P98175 930 aaKnown RBP19.76■□□□□ 0.75
TCOF1-206ENST00000445265 MYL6BP14649 208 aa19.75■□□□□ 0.75
TCOF1-206ENST00000445265 PROSER2Q86WR7 435 aaPredicted RBP19.75■□□□□ 0.75
TCOF1-206ENST00000445265 CREBRFQ8IUR6 639 aa19.75■□□□□ 0.75
TCOF1-206ENST00000445265 ZRANB1Q9UGI0 708 aa19.75■□□□□ 0.75
TCOF1-206ENST00000445265 MYOM2P54296 1465 aa19.75■□□□□ 0.75
TCOF1-206ENST00000445265 ZSCAN23Q3MJ62 389 aa19.74■□□□□ 0.75
TCOF1-206ENST00000445265 C16orf71Q8IYS4 520 aaPredicted RBP19.74■□□□□ 0.75
TCOF1-206ENST00000445265 MCM5P33992 734 aa19.74■□□□□ 0.75
TCOF1-206ENST00000445265 CDC42BPAQ5VT25 1732 aa19.74■□□□□ 0.75
TCOF1-206ENST00000445265 ERICH2A1L162 156 aa19.74■□□□□ 0.75
TCOF1-206ENST00000445265 PPP1R42Q7Z4L9 355 aa19.74■□□□□ 0.75
TCOF1-206ENST00000445265 MPNDQ8N594 471 aa19.74■□□□□ 0.75
TCOF1-206ENST00000445265 ESYT1Q9BSJ8 1104 aa19.74■□□□□ 0.75
TCOF1-206ENST00000445265 MAP3K11Q16584 847 aa19.74■□□□□ 0.75
TCOF1-206ENST00000445265 LARP1Q6PKG0 1096 aaKnown RBP19.74■□□□□ 0.75
TCOF1-206ENST00000445265 ECHDC1Q9NTX5 307 aa19.73■□□□□ 0.75
TCOF1-206ENST00000445265 STK38Q15208 465 aa19.73■□□□□ 0.75
TCOF1-206ENST00000445265 ATP8B2P98198 1209 aa19.73■□□□□ 0.75
TCOF1-206ENST00000445265 TSHZ3Q63HK5 1081 aa19.73■□□□□ 0.75
TCOF1-206ENST00000445265 CEBPZQ03701 1054 aaKnown RBP19.72■□□□□ 0.75
TCOF1-206ENST00000445265 CCDC158Q5M9N0 1113 aa19.72■□□□□ 0.75
TCOF1-206ENST00000445265 USHBP1Q8N6Y0 703 aa19.72■□□□□ 0.75
TCOF1-206ENST00000445265 SCAND2PQ9GZW5 306 aaPredicted RBP19.72■□□□□ 0.75
TCOF1-206ENST00000445265 PHF8Q9UPP1 1060 aa19.72■□□□□ 0.75
TCOF1-206ENST00000445265 TNRQ92752 1358 aa19.72■□□□□ 0.75
TCOF1-206ENST00000445265 CABP4P57796 275 aa19.72■□□□□ 0.75
TCOF1-206ENST00000445265 TSR1Q2NL82 804 aaKnown RBP19.72■□□□□ 0.75
TCOF1-206ENST00000445265 IL13P35225 146 aa19.71■□□□□ 0.75
TCOF1-206ENST00000445265 OLFM4Q6UX06 510 aa19.71■□□□□ 0.75
TCOF1-206ENST00000445265 TRPM1Q7Z4N2 1603 aa19.71■□□□□ 0.75
TCOF1-206ENST00000445265 RHPN1Q8TCX5 695 aa19.71■□□□□ 0.75
TCOF1-206ENST00000445265 LRSAM1Q6UWE0 723 aa19.71■□□□□ 0.74
TCOF1-206ENST00000445265 TBC1D2BQ9UPU7 963 aa19.71■□□□□ 0.74
TCOF1-206ENST00000445265 EVI5LQ96CN4 794 aa19.7■□□□□ 0.74
TCOF1-206ENST00000445265 USP26Q9BXU7 913 aa19.7■□□□□ 0.74
TCOF1-206ENST00000445265 STX6O43752 255 aa19.7■□□□□ 0.74
TCOF1-206ENST00000445265 ME1P48163 572 aa19.7■□□□□ 0.74
TCOF1-206ENST00000445265 DHX8Q14562 1220 aaKnown RBP19.7■□□□□ 0.74
TCOF1-206ENST00000445265 HYPKQ9NX55 129 aa19.7■□□□□ 0.74
TCOF1-206ENST00000445265 EDC4Q6P2E9 1401 aaKnown RBP19.7■□□□□ 0.74
TCOF1-206ENST00000445265 FERMT3Q86UX7 667 aa19.7■□□□□ 0.74
TCOF1-206ENST00000445265 GOLGA6L1Q8N7Z2 621 aa19.7■□□□□ 0.74
TCOF1-206ENST00000445265 ANKRD20A12PQ8NF67 263 aa19.7■□□□□ 0.74
TCOF1-206ENST00000445265 CCAR2Q8N163 923 aaKnown RBP19.69■□□□□ 0.74
TCOF1-206ENST00000445265 RBM27Q9P2N5 1060 aaKnown RBP19.69■□□□□ 0.74
TCOF1-206ENST00000445265 PI4KAP2A4QPH2 592 aa19.69■□□□□ 0.74
TCOF1-206ENST00000445265 ZNF771Q7L3S4 317 aaPredicted RBP19.69■□□□□ 0.74
TCOF1-206ENST00000445265 PI4KAP1Q8N8J0 262 aa19.69■□□□□ 0.74
TCOF1-206ENST00000445265 JMYQ8N9B5 988 aa19.69■□□□□ 0.74
TCOF1-206ENST00000445265 BOLA2Q9H3K6 86 aa19.69■□□□□ 0.74
TCOF1-206ENST00000445265 IQGAP3Q86VI3 1631 aa19.68■□□□□ 0.74
TCOF1-206ENST00000445265 GDPD2Q9HCC8 539 aa19.68■□□□□ 0.74
TCOF1-206ENST00000445265 CTNNA3Q9UI47 895 aa19.68■□□□□ 0.74
TCOF1-206ENST00000445265 TTC39AQ5SRH9 613 aa19.68■□□□□ 0.74
TCOF1-206ENST00000445265 ARGLU1Q9NWB6 273 aaPredicted RBP19.68■□□□□ 0.74
TCOF1-206ENST00000445265 FLT4P35916 1363 aa19.67■□□□□ 0.74
TCOF1-206ENST00000445265 PES1O00541 588 aaKnown RBP19.67■□□□□ 0.74
TCOF1-206ENST00000445265 KRT24Q2M2I5 525 aa19.67■□□□□ 0.74
TCOF1-206ENST00000445265 MNS1Q8NEH6 495 aa19.67■□□□□ 0.74
TCOF1-206ENST00000445265 UVSSAQ2YD98 709 aa19.67■□□□□ 0.74
TCOF1-206ENST00000445265 MPRIPQ6WCQ1 1025 aa19.67■□□□□ 0.74
TCOF1-206ENST00000445265 MTHFSDQ2M296 383 aaKnown RBP19.67■□□□□ 0.74
TCOF1-206ENST00000445265 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.67■□□□□ 0.741e-6■■■□□ 16.8
TCOF1-206ENST00000445265 UBE2HP62256 183 aa19.67■□□□□ 0.74
TCOF1-206ENST00000445265 CROCC2H7BZ55 1655 aa19.66■□□□□ 0.74
TCOF1-206ENST00000445265 SMC2O95347 1197 aa19.66■□□□□ 0.74
TCOF1-206ENST00000445265 XPCQ01831 940 aaPredicted RBP19.66■□□□□ 0.74
TCOF1-206ENST00000445265 GPS2Q13227 327 aa19.66■□□□□ 0.74
TCOF1-206ENST00000445265 CEP126Q9P2H0 1117 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms