RNA–Protein interactions for RNA: ENST00000444814.2

LTBR-204, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 1,553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-204ENST00000444814 TEFQ10587 303 aa16.21■□□□□ 0.18
LTBR-204ENST00000444814 RREB1Q92766 1687 aa16.21■□□□□ 0.18
LTBR-204ENST00000444814 RNMTO43148 476 aaKnown RBP16.2■□□□□ 0.18
LTBR-204ENST00000444814 SLC52A2Q9HAB3 445 aa16.19■□□□□ 0.18
LTBR-204ENST00000444814 LMOD3Q0VAK6 560 aa16.18■□□□□ 0.18
LTBR-204ENST00000444814 R3HDM1Q15032 1099 aaKnown RBP16.18■□□□□ 0.18
LTBR-204ENST00000444814 KDM6AO15550 1401 aaPredicted RBP16.18■□□□□ 0.18
LTBR-204ENST00000444814 PROM2Q8N271 834 aa16.17■□□□□ 0.18
LTBR-204ENST00000444814 NFATC2IPQ8NCF5 419 aa16.17■□□□□ 0.18
LTBR-204ENST00000444814 EP400Q96L91 3159 aa16.17■□□□□ 0.18
LTBR-204ENST00000444814 SLC15A2Q16348 729 aa16.17■□□□□ 0.18
LTBR-204ENST00000444814 TTC5Q8N0Z6 440 aa16.17■□□□□ 0.18
LTBR-204ENST00000444814 NUP188Q5SRE5 1749 aa16.16■□□□□ 0.18
LTBR-204ENST00000444814 LOC102724428A0A0B4J2F2 783 aa16.16■□□□□ 0.18
LTBR-204ENST00000444814 SIK1P57059 783 aa16.16■□□□□ 0.18
LTBR-204ENST00000444814 FLAD1Q8NFF5 587 aa16.16■□□□□ 0.18
LTBR-204ENST00000444814 PHACTR3Q96KR7 559 aa16.16■□□□□ 0.18
LTBR-204ENST00000444814 PSDA5PKW4 1024 aaPredicted RBP16.15■□□□□ 0.18
LTBR-204ENST00000444814 NFE2L2Q16236 605 aa16.15■□□□□ 0.18
LTBR-204ENST00000444814 ATG3Q9NT62 314 aa16.15■□□□□ 0.18
LTBR-204ENST00000444814 TOGARAM1Q9Y4F4 1720 aa16.15■□□□□ 0.18
LTBR-204ENST00000444814 ATP6V1AP38606 617 aa16.14■□□□□ 0.17
LTBR-204ENST00000444814 RUNDC1Q96C34 613 aa16.14■□□□□ 0.17
LTBR-204ENST00000444814 RBM42Q9BTD8 480 aaKnown RBP16.14■□□□□ 0.17
LTBR-204ENST00000444814 TFCP2L1Q9NZI6 479 aa16.14■□□□□ 0.17
LTBR-204ENST00000444814 ASAP1Q9ULH1 1129 aa16.14■□□□□ 0.17
LTBR-204ENST00000444814 ITGB4P16144 1822 aa16.14■□□□□ 0.17
LTBR-204ENST00000444814 PNISRQ8TF01 805 aaKnown RBP16.13■□□□□ 0.17
LTBR-204ENST00000444814 AK7Q96M32 723 aa16.13■□□□□ 0.17
LTBR-204ENST00000444814 LGR6Q9HBX8 967 aa16.13■□□□□ 0.17
LTBR-204ENST00000444814 MRS2Q9HD23 443 aa16.13■□□□□ 0.17
LTBR-204ENST00000444814 MRC1P22897 1456 aa16.13■□□□□ 0.17
LTBR-204ENST00000444814 PLEKHF1Q96S99 279 aa16.13■□□□□ 0.17
LTBR-204ENST00000444814 LRRC4BQ9NT99 713 aa16.13■□□□□ 0.17
LTBR-204ENST00000444814 LY75O60449 1722 aa16.13■□□□□ 0.17
LTBR-204ENST00000444814 SCN11AQ9UI33 1791 aa16.12■□□□□ 0.17
LTBR-204ENST00000444814 CEMIPQ8WUJ3 1361 aa16.11■□□□□ 0.17
LTBR-204ENST00000444814 BTBD11A6QL63 1104 aa16.1■□□□□ 0.17
LTBR-204ENST00000444814 HOMEZQ8IX15 550 aa16.1■□□□□ 0.17
LTBR-204ENST00000444814 IL17REQ8NFR9 667 aa16.1■□□□□ 0.17
LTBR-204ENST00000444814 SLC16A10Q8TF71 515 aa16.1■□□□□ 0.17
LTBR-204ENST00000444814 TEX13AQ9BXU3 409 aaPredicted RBP16.1■□□□□ 0.17
LTBR-204ENST00000444814 ANO8Q9HCE9 1232 aaPredicted RBP16.1■□□□□ 0.17
LTBR-204ENST00000444814 ADAMTS8Q9UP79 889 aa16.1■□□□□ 0.17
LTBR-204ENST00000444814 PTCD1O75127 700 aaKnown RBP16.09■□□□□ 0.17
LTBR-204ENST00000444814 RIPK4P57078 832 aa16.09■□□□□ 0.17
LTBR-204ENST00000444814 VSIG10Q8N0Z9 540 aa16.09■□□□□ 0.17
LTBR-204ENST00000444814 AKT1S1Q96B36 256 aa16.09■□□□□ 0.17
LTBR-204ENST00000444814 SPON1Q9HCB6 807 aa16.09■□□□□ 0.17
LTBR-204ENST00000444814 TAF7Q15545 349 aaPredicted RBP16.09■□□□□ 0.17
LTBR-204ENST00000444814 ADAMTS7Q9UKP4 1686 aa16.08■□□□□ 0.17
LTBR-204ENST00000444814 CALD1Q05682 793 aaKnown RBP16.08■□□□□ 0.16
LTBR-204ENST00000444814 RC3H1Q5TC82 1133 aaKnown RBP16.08■□□□□ 0.16
LTBR-204ENST00000444814 FMNL2Q96PY5 1086 aa16.08■□□□□ 0.16
LTBR-204ENST00000444814 PAPPAQ13219 1627 aa16.08■□□□□ 0.16
LTBR-204ENST00000444814 STARD3NLO95772 234 aa16.07■□□□□ 0.16
LTBR-204ENST00000444814 TMPOP42166 694 aaKnown RBP16.07■□□□□ 0.16
LTBR-204ENST00000444814 KCNQ4P56696 695 aa16.07■□□□□ 0.16
LTBR-204ENST00000444814 ZNF790Q6PG37 636 aa16.07■□□□□ 0.16
LTBR-204ENST00000444814 MCM10Q7L590 875 aa16.07■□□□□ 0.16
LTBR-204ENST00000444814 NPM2Q86SE8 214 aaKnown RBP16.07■□□□□ 0.16
LTBR-204ENST00000444814 MTFR1LQ9H019 292 aa16.07■□□□□ 0.16
LTBR-204ENST00000444814 SSFA2P28290 1259 aa16.06■□□□□ 0.16
LTBR-204ENST00000444814 ZNF827Q17R98 1081 aa16.06■□□□□ 0.16
LTBR-204ENST00000444814 CCDC146Q8IYE0 955 aa16.06■□□□□ 0.16
LTBR-204ENST00000444814 RTCBQ9Y3I0 505 aaKnown RBP16.06■□□□□ 0.16
LTBR-204ENST00000444814 ZNF831Q5JPB2 1677 aa16.06■□□□□ 0.16
LTBR-204ENST00000444814 CNTNAP4Q9C0A0 1308 aa16.05■□□□□ 0.16
LTBR-204ENST00000444814 BABAM1Q9NWV8 329 aa16.05■□□□□ 0.16
LTBR-204ENST00000444814 PPP1R1BQ9UD71 204 aaPredicted RBP16.05■□□□□ 0.16
LTBR-204ENST00000444814 C5P01031 1676 aa16.05■□□□□ 0.16
LTBR-204ENST00000444814 GNPATO15228 680 aa16.04■□□□□ 0.16
LTBR-204ENST00000444814 NPM3O75607 178 aaKnown RBP16.04■□□□□ 0.16
LTBR-204ENST00000444814 POLD1P28340 1107 aa16.04■□□□□ 0.16
LTBR-204ENST00000444814 SLC39A6Q13433 755 aa16.04■□□□□ 0.16
LTBR-204ENST00000444814 LINC00116Q8NCU8 138 aa16.04■□□□□ 0.16
LTBR-204ENST00000444814 C4BP0C0L5 1744 aa16.03■□□□□ 0.16
LTBR-204ENST00000444814 ITPK1Q13572 414 aa16.03■□□□□ 0.16
LTBR-204ENST00000444814 NEUROD2Q15784 382 aa16.03■□□□□ 0.16
LTBR-204ENST00000444814 DCTN1Q14203 1278 aa16.02■□□□□ 0.16
LTBR-204ENST00000444814 TRAPPC3LQ5T215 181 aa16.02■□□□□ 0.16
LTBR-204ENST00000444814 HEG1Q9ULI3 1381 aa16.02■□□□□ 0.15
LTBR-204ENST00000444814 PNPLA7Q6ZV29 1317 aa16.02■□□□□ 0.15
LTBR-204ENST00000444814 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.01■□□□□ 0.15
LTBR-204ENST00000444814 RPS6KA4O75676 772 aa16.01■□□□□ 0.15
LTBR-204ENST00000444814 NGEFQ8N5V2 710 aa16.01■□□□□ 0.15
LTBR-204ENST00000444814 QSER1Q2KHR3 1735 aa16.01■□□□□ 0.15
LTBR-204ENST00000444814 PHF14O94880 888 aa16■□□□□ 0.15
LTBR-204ENST00000444814 ZBTB7AO95365 584 aa16■□□□□ 0.15
LTBR-204ENST00000444814 SNRPA1P09661 255 aaKnown RBP16■□□□□ 0.15
LTBR-204ENST00000444814 CRKLP46109 303 aaKnown RBP16■□□□□ 0.15
LTBR-204ENST00000444814 CCDC87Q9NVE4 849 aa16■□□□□ 0.15
LTBR-204ENST00000444814 LRP5O75197 1615 aa16■□□□□ 0.15
LTBR-204ENST00000444814 RFC4P35249 363 aa16■□□□□ 0.15
LTBR-204ENST00000444814 DNAJC10Q8IXB1 793 aa16■□□□□ 0.15
LTBR-204ENST00000444814 ZNF496Q96IT1 587 aaPredicted RBP16■□□□□ 0.15
LTBR-204ENST00000444814 TSPYL4Q9UJ04 414 aa16■□□□□ 0.15
LTBR-204ENST00000444814 TAOK2Q9UL54 1235 aa16■□□□□ 0.15
LTBR-204ENST00000444814 RRP7AQ9Y3A4 280 aaKnown RBP16■□□□□ 0.15
LTBR-204ENST00000444814 VIRMAQ69YN4 1812 aaKnown RBP15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms