RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 RGPD4Q7Z3J3 1758 aa18.52■□□□□ 0.55
SSBP3-208ENST00000444533 TOGARAM1Q9Y4F4 1720 aa18.52■□□□□ 0.55
SSBP3-208ENST00000444533 ITGB4P16144 1822 aa18.51■□□□□ 0.55
SSBP3-208ENST00000444533 SCN11AQ9UI33 1791 aa18.51■□□□□ 0.55
SSBP3-208ENST00000444533 MCM10Q7L590 875 aa18.51■□□□□ 0.55
SSBP3-208ENST00000444533 IL17REQ8NFR9 667 aa18.51■□□□□ 0.55
SSBP3-208ENST00000444533 CCNL1Q9UK58 526 aaPredicted RBP18.51■□□□□ 0.55
SSBP3-208ENST00000444533 ASAP1Q9ULH1 1129 aa18.5■□□□□ 0.55
SSBP3-208ENST00000444533 APAF1O14727 1248 aa18.49■□□□□ 0.55
SSBP3-208ENST00000444533 RBM42Q9BTD8 480 aaKnown RBP18.49■□□□□ 0.55
SSBP3-208ENST00000444533 ATG3Q9NT62 314 aa18.49■□□□□ 0.55
SSBP3-208ENST00000444533 RRP7AQ9Y3A4 280 aaKnown RBP18.49■□□□□ 0.55
SSBP3-208ENST00000444533 CEMIPQ8WUJ3 1361 aa18.48■□□□□ 0.55
SSBP3-208ENST00000444533 BTBD11A6QL63 1104 aa18.48■□□□□ 0.55
SSBP3-208ENST00000444533 CALD1Q05682 793 aaKnown RBP18.48■□□□□ 0.55
SSBP3-208ENST00000444533 MRC1P22897 1456 aa18.47■□□□□ 0.55
SSBP3-208ENST00000444533 LOC102724428A0A0B4J2F2 783 aa18.47■□□□□ 0.55
SSBP3-208ENST00000444533 SIK1P57059 783 aa18.47■□□□□ 0.55
SSBP3-208ENST00000444533 DCTN1Q14203 1278 aa18.47■□□□□ 0.55
SSBP3-208ENST00000444533 TAF7Q15545 349 aaPredicted RBP18.47■□□□□ 0.55
SSBP3-208ENST00000444533 MIER1Q8N108 512 aa18.47■□□□□ 0.55
SSBP3-208ENST00000444533 STK32BQ9NY57 414 aa18.47■□□□□ 0.55
SSBP3-208ENST00000444533 PTCD1O75127 700 aaKnown RBP18.46■□□□□ 0.55
SSBP3-208ENST00000444533 ATP6V1AP38606 617 aa18.46■□□□□ 0.55
SSBP3-208ENST00000444533 ADAMTS7Q9UKP4 1686 aa18.45■□□□□ 0.54
SSBP3-208ENST00000444533 VIRMAQ69YN4 1812 aaKnown RBP18.44■□□□□ 0.54
SSBP3-208ENST00000444533 ZNF790Q6PG37 636 aa18.44■□□□□ 0.54
SSBP3-208ENST00000444533 PROM2Q8N271 834 aa18.44■□□□□ 0.54
SSBP3-208ENST00000444533 NGEFQ8N5V2 710 aa18.44■□□□□ 0.54
SSBP3-208ENST00000444533 SLC39A6Q13433 755 aa18.43■□□□□ 0.54
SSBP3-208ENST00000444533 RREB1Q92766 1687 aa18.43■□□□□ 0.54
SSBP3-208ENST00000444533 DLG5Q8TDM6 1919 aa18.43■□□□□ 0.54
SSBP3-208ENST00000444533 FMNL2Q96PY5 1086 aa18.42■□□□□ 0.54
SSBP3-208ENST00000444533 LY75O60449 1722 aa18.41■□□□□ 0.54
SSBP3-208ENST00000444533 AK7Q96M32 723 aa18.41■□□□□ 0.54
SSBP3-208ENST00000444533 THUMPD2Q9BTF0 503 aaKnown RBP18.41■□□□□ 0.54
SSBP3-208ENST00000444533 LRRC4BQ9NT99 713 aa18.41■□□□□ 0.54
SSBP3-208ENST00000444533 BABAM1Q9NWV8 329 aa18.41■□□□□ 0.54
SSBP3-208ENST00000444533 TFCP2L1Q9NZI6 479 aa18.41■□□□□ 0.54
SSBP3-208ENST00000444533 TSPYL4Q9UJ04 414 aa18.41■□□□□ 0.54
SSBP3-208ENST00000444533 LAS1LQ9Y4W2 734 aaKnown RBP18.41■□□□□ 0.54
SSBP3-208ENST00000444533 KCNQ4P56696 695 aa18.4■□□□□ 0.54
SSBP3-208ENST00000444533 NCBP3Q53F19 620 aaKnown RBP18.4■□□□□ 0.54
SSBP3-208ENST00000444533 VSIG10Q8N0Z9 540 aa18.4■□□□□ 0.54
SSBP3-208ENST00000444533 TEX13AQ9BXU3 409 aaPredicted RBP18.4■□□□□ 0.54
SSBP3-208ENST00000444533 NUP188Q5SRE5 1749 aa18.4■□□□□ 0.54
SSBP3-208ENST00000444533 SLC15A2Q16348 729 aa18.39■□□□□ 0.53
SSBP3-208ENST00000444533 CCDC27Q2M243 656 aa18.39■□□□□ 0.53
SSBP3-208ENST00000444533 TRIM35Q9UPQ4 493 aa18.39■□□□□ 0.53
SSBP3-208ENST00000444533 STARD3NLO95772 234 aa18.38■□□□□ 0.53
SSBP3-208ENST00000444533 R3HDM1Q15032 1099 aaKnown RBP18.38■□□□□ 0.53
SSBP3-208ENST00000444533 NPM2Q86SE8 214 aaKnown RBP18.37■□□□□ 0.53
SSBP3-208ENST00000444533 FLAD1Q8NFF5 587 aa18.37■□□□□ 0.53
SSBP3-208ENST00000444533 SALL2Q9Y467 1007 aaPredicted RBP18.37■□□□□ 0.53
SSBP3-208ENST00000444533 SIPA1L3O60292 1781 aaPredicted RBP18.36■□□□□ 0.53
SSBP3-208ENST00000444533 GNAI1P63096 354 aa18.36■□□□□ 0.53
SSBP3-208ENST00000444533 ZNF496Q96IT1 587 aaPredicted RBP18.36■□□□□ 0.53
SSBP3-208ENST00000444533 MIS18AQ9NYP9 233 aa18.36■□□□□ 0.53
SSBP3-208ENST00000444533 PAPPAQ13219 1627 aa18.35■□□□□ 0.53
SSBP3-208ENST00000444533 HEG1Q9ULI3 1381 aa18.35■□□□□ 0.53
SSBP3-208ENST00000444533 PSDA5PKW4 1024 aaPredicted RBP18.35■□□□□ 0.53
SSBP3-208ENST00000444533 SNRPA1P09661 255 aaKnown RBP18.35■□□□□ 0.53
SSBP3-208ENST00000444533 CFAP44Q96MT7 982 aa18.35■□□□□ 0.53
SSBP3-208ENST00000444533 ANO8Q9HCE9 1232 aaPredicted RBP18.35■□□□□ 0.53
SSBP3-208ENST00000444533 C5P01031 1676 aa18.34■□□□□ 0.53
SSBP3-208ENST00000444533 MSH5O43196 834 aa18.34■□□□□ 0.53
SSBP3-208ENST00000444533 ITPK1Q13572 414 aa18.34■□□□□ 0.53
SSBP3-208ENST00000444533 RC3H1Q5TC82 1133 aaKnown RBP18.34■□□□□ 0.53
SSBP3-208ENST00000444533 WWC1Q8IX03 1113 aa18.34■□□□□ 0.53
SSBP3-208ENST00000444533 LINC00116Q8NCU8 138 aa18.34■□□□□ 0.53
SSBP3-208ENST00000444533 AKT1S1Q96B36 256 aa18.34■□□□□ 0.53
SSBP3-208ENST00000444533 IFT57Q9NWB7 429 aa18.34■□□□□ 0.53
SSBP3-208ENST00000444533 RTCBQ9Y3I0 505 aaKnown RBP18.34■□□□□ 0.53
SSBP3-208ENST00000444533 ZNF831Q5JPB2 1677 aa18.34■□□□□ 0.53
SSBP3-208ENST00000444533 CNTNAP4Q9C0A0 1308 aa18.33■□□□□ 0.53
SSBP3-208ENST00000444533 SENP3-EIF4A1A0A087X0R7 540 aa18.33■□□□□ 0.52
SSBP3-208ENST00000444533 GNPATO15228 680 aa18.33■□□□□ 0.52
SSBP3-208ENST00000444533 DNAJC10Q8IXB1 793 aa18.33■□□□□ 0.52
SSBP3-208ENST00000444533 KCPQ6ZWJ8 1503 aa18.33■□□□□ 0.52
SSBP3-208ENST00000444533 CHL1O00533 1208 aa18.32■□□□□ 0.52
SSBP3-208ENST00000444533 KCNQ3O43525 872 aa18.32■□□□□ 0.52
SSBP3-208ENST00000444533 CRKLP46109 303 aaKnown RBP18.32■□□□□ 0.52
SSBP3-208ENST00000444533 ZNF827Q17R98 1081 aa18.32■□□□□ 0.52
SSBP3-208ENST00000444533 WDR63Q8IWG1 891 aa18.32■□□□□ 0.52
SSBP3-208ENST00000444533 SLC4A9Q96Q91 983 aa18.32■□□□□ 0.52
SSBP3-208ENST00000444533 CHMP4AQ9BY43 222 aa18.31■□□□□ 0.52
SSBP3-208ENST00000444533 CCDC87Q9NVE4 849 aa18.31■□□□□ 0.52
SSBP3-208ENST00000444533 C4BP0C0L5 1744 aa18.31■□□□□ 0.52
SSBP3-208ENST00000444533 UBR2Q8IWV8 1755 aa18.3■□□□□ 0.52
SSBP3-208ENST00000444533 IL16Q14005 1332 aa18.3■□□□□ 0.52
SSBP3-208ENST00000444533 PHF14O94880 888 aa18.3■□□□□ 0.52
SSBP3-208ENST00000444533 SSFA2P28290 1259 aa18.3■□□□□ 0.52
SSBP3-208ENST00000444533 EIF4A1P60842 406 aaKnown RBP18.3■□□□□ 0.52
SSBP3-208ENST00000444533 TAF1LQ8IZX4 1826 aa18.3■□□□□ 0.52
SSBP3-208ENST00000444533 CYP19A1P11511 503 aaPredicted RBP18.29■□□□□ 0.52
SSBP3-208ENST00000444533 ADRA2BP18089 450 aa18.29■□□□□ 0.52
SSBP3-208ENST00000444533 TRAPPC3LQ5T215 181 aa18.29■□□□□ 0.52
SSBP3-208ENST00000444533 RPS6KA4O75676 772 aa18.28■□□□□ 0.52
SSBP3-208ENST00000444533 SLC16A10Q8TF71 515 aa18.28■□□□□ 0.52
SSBP3-208ENST00000444533 MYH16Q9H6N6 1097 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms