RNA–Protein interactions for RNA: ENST00000444237.2

SCN11A-202, Transcript of sodium voltage-gated channel alpha subunit 11, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SCN11A, Length 5,729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11A-202ENST00000444237 RRP7AQ9Y3A4 280 aaKnown RBP6.03□□□□□ -1.44
SCN11A-202ENST00000444237 LRRC9Q6ZRR7 1453 aa6.03□□□□□ -1.44
SCN11A-202ENST00000444237 KIAA0556O60303 1618 aa6.03□□□□□ -1.44
SCN11A-202ENST00000444237 RAPGEF6Q8TEU7 1601 aa6.03□□□□□ -1.44
SCN11A-202ENST00000444237 HCLS1P14317 486 aaPredicted RBP6.02□□□□□ -1.45
SCN11A-202ENST00000444237 FAM177A1Q8N128 213 aaPredicted RBP6.02□□□□□ -1.45
SCN11A-202ENST00000444237 OTUD6BQ8N6M0 293 aa6.02□□□□□ -1.45
SCN11A-202ENST00000444237 NUP133Q8WUM0 1156 aa6.02□□□□□ -1.45
SCN11A-202ENST00000444237 UPF3BQ9BZI7 483 aaKnown RBP6.02□□□□□ -1.45
SCN11A-202ENST00000444237 TRMT1Q9NXH9 659 aaKnown RBP6.02□□□□□ -1.45
SCN11A-202ENST00000444237 SWAP70Q9UH65 585 aa6.02□□□□□ -1.45
SCN11A-202ENST00000444237 ERLIN2O94905 339 aa6.02□□□□□ -1.45
SCN11A-202ENST00000444237 PPP2R5AQ15172 486 aa6.02□□□□□ -1.45
SCN11A-202ENST00000444237 CEP57Q86XR8 500 aa6.02□□□□□ -1.45
SCN11A-202ENST00000444237 CCDC148Q8NFR7 591 aa6.02□□□□□ -1.45
SCN11A-202ENST00000444237 WDR66Q8TBY9 1149 aa6.02□□□□□ -1.45
SCN11A-202ENST00000444237 VPS18Q9P253 973 aa6.02□□□□□ -1.45
SCN11A-202ENST00000444237 MYOM3Q5VTT5 1437 aa6.02□□□□□ -1.45
SCN11A-202ENST00000444237 CASTP20810 708 aaKnown RBP6.02□□□□□ -1.45
SCN11A-202ENST00000444237 UBE2HP62256 183 aa6.02□□□□□ -1.45
SCN11A-202ENST00000444237 FBXW7Q969H0 707 aa6.02□□□□□ -1.45
SCN11A-202ENST00000444237 DISP3Q9P2K9 1392 aa6.02□□□□□ -1.45
SCN11A-202ENST00000444237 ZBTB12Q9Y330 459 aaPredicted RBP6.02□□□□□ -1.45
SCN11A-202ENST00000444237 IBTKQ9P2D0 1353 aaPredicted RBP6.02□□□□□ -1.45
SCN11A-202ENST00000444237 SF3B2Q13435 895 aaKnown RBP6.02□□□□□ -1.45
SCN11A-202ENST00000444237 FILIP1LQ4L180 1135 aa6.02□□□□□ -1.45
SCN11A-202ENST00000444237 CCDC186Q7Z3E2 898 aa6.02□□□□□ -1.45
SCN11A-202ENST00000444237 FAM200AQ8TCP9 573 aa6.02□□□□□ -1.45
SCN11A-202ENST00000444237 MIPOL1Q8TD10 442 aa6.02□□□□□ -1.45
SCN11A-202ENST00000444237 DDX19AQ9NUU7 478 aaKnown RBP6.02□□□□□ -1.45
SCN11A-202ENST00000444237 NCOA1Q15788 1441 aa6.02□□□□□ -1.45
SCN11A-202ENST00000444237 SLFN5Q08AF3 891 aa6.02□□□□□ -1.45
SCN11A-202ENST00000444237 ZNF396Q96N95 335 aaPredicted RBP6.02□□□□□ -1.45
SCN11A-202ENST00000444237 SUPT6HQ7KZ85 1726 aaKnown RBP6.01□□□□□ -1.45
SCN11A-202ENST00000444237 MAP3K1Q13233 1512 aa6.01□□□□□ -1.45
SCN11A-202ENST00000444237 KIF5CO60282 957 aa6.01□□□□□ -1.45
SCN11A-202ENST00000444237 KDM4AO75164 1064 aa6.01□□□□□ -1.45
SCN11A-202ENST00000444237 TERF2Q15554 542 aa6.01□□□□□ -1.45
SCN11A-202ENST00000444237 ANO10Q9NW15 660 aa6.01□□□□□ -1.45
SCN11A-202ENST00000444237 CTAGE5O15320 804 aa6.01□□□□□ -1.45
SCN11A-202ENST00000444237 ZSCAN20P17040 1043 aaPredicted RBP6.01□□□□□ -1.45
SCN11A-202ENST00000444237 SATB1Q01826 763 aa6.01□□□□□ -1.45
SCN11A-202ENST00000444237 MCTP2Q6DN12 878 aa6.01□□□□□ -1.45
SCN11A-202ENST00000444237 NKTRP30414 1462 aaKnown RBP6.01□□□□□ -1.45
SCN11A-202ENST00000444237 MX1P20591 662 aa6.01□□□□□ -1.45
SCN11A-202ENST00000444237 PSMA5P28066 241 aa6.01□□□□□ -1.45
SCN11A-202ENST00000444237 GCKP35557 465 aa6.01□□□□□ -1.45
SCN11A-202ENST00000444237 PPFIBP1Q86W92 1011 aa6.01□□□□□ -1.45
SCN11A-202ENST00000444237 SPATA32Q96LK8 384 aa6.01□□□□□ -1.45
SCN11A-202ENST00000444237 RRP15Q9Y3B9 282 aaKnown RBP6.01□□□□□ -1.45
SCN11A-202ENST00000444237 SKILP12757 684 aa6.01□□□□□ -1.45
SCN11A-202ENST00000444237 INPP5BP32019 993 aa6.01□□□□□ -1.45
SCN11A-202ENST00000444237 TRDNQ13061 729 aa6.01□□□□□ -1.45
SCN11A-202ENST00000444237 B4GALNT4Q76KP1 1039 aa6.01□□□□□ -1.45
SCN11A-202ENST00000444237 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.01□□□□□ -1.45
SCN11A-202ENST00000444237 ADGRL1O94910 1474 aa6.01□□□□□ -1.45
SCN11A-202ENST00000444237 A6NNZ2 444 aa6□□□□□ -1.45
SCN11A-202ENST00000444237 TUBB8Q3ZCM7 444 aa6□□□□□ -1.45
SCN11A-202ENST00000444237 RNF168Q8IYW5 571 aaPredicted RBP6□□□□□ -1.45
SCN11A-202ENST00000444237 GOLGA1Q92805 767 aa6□□□□□ -1.45
SCN11A-202ENST00000444237 VEZTQ9HBM0 779 aa6□□□□□ -1.45
SCN11A-202ENST00000444237 LOC102724159A0A0B4J2E5 919 aa6□□□□□ -1.45
SCN11A-202ENST00000444237 ERCC3P19447 782 aa6□□□□□ -1.45
SCN11A-202ENST00000444237 PWP2Q15269 919 aaKnown RBP6□□□□□ -1.45
SCN11A-202ENST00000444237 HDXQ7Z353 690 aa6□□□□□ -1.45
SCN11A-202ENST00000444237 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6□□□□□ -1.45
SCN11A-202ENST00000444237 ZSCAN31Q96LW9 406 aaPredicted RBP6□□□□□ -1.45
SCN11A-202ENST00000444237 DACH1Q9UI36 760 aa6□□□□□ -1.45
SCN11A-202ENST00000444237 NUP160Q12769 1436 aa6□□□□□ -1.45
SCN11A-202ENST00000444237 TEX14Q8IWB6 1497 aa6□□□□□ -1.45
SCN11A-202ENST00000444237 FGD6Q6ZV73 1430 aa6□□□□□ -1.45
SCN11A-202ENST00000444237 ODF2Q5BJF6 829 aa6□□□□□ -1.45
SCN11A-202ENST00000444237 CTCFLQ8NI51 663 aaPredicted RBP6□□□□□ -1.45
SCN11A-202ENST00000444237 FMNL2Q96PY5 1086 aa6□□□□□ -1.45
SCN11A-202ENST00000444237 SCAND2PQ9GZW5 306 aaPredicted RBP6□□□□□ -1.45
SCN11A-202ENST00000444237 FBXO3Q9UK99 471 aa6□□□□□ -1.45
SCN11A-202ENST00000444237 MCM6Q14566 821 aa6□□□□□ -1.45
SCN11A-202ENST00000444237 SYNE3Q6ZMZ3 975 aa6□□□□□ -1.45
SCN11A-202ENST00000444237 EFCAB13Q8IY85 973 aa6□□□□□ -1.45
SCN11A-202ENST00000444237 CFAP45Q9UL16 551 aa6□□□□□ -1.45
SCN11A-202ENST00000444237 PPP6R1Q9UPN7 881 aa6□□□□□ -1.45
SCN11A-202ENST00000444237 OAS2P29728 719 aaKnown RBP6□□□□□ -1.45
SCN11A-202ENST00000444237 ARHGAP25P42331 645 aa6□□□□□ -1.45
SCN11A-202ENST00000444237 PIP4K2AP48426 406 aaPredicted RBP6□□□□□ -1.45
SCN11A-202ENST00000444237 AKAP17AQ02040 695 aaKnown RBP6□□□□□ -1.45
SCN11A-202ENST00000444237 KIF4BQ2VIQ3 1234 aa6□□□□□ -1.45
SCN11A-202ENST00000444237 BMP2KLQ5H9B9 411 aa6□□□□□ -1.45
SCN11A-202ENST00000444237 CCDC83Q8IWF9 413 aa6□□□□□ -1.45
SCN11A-202ENST00000444237 TSC1Q92574 1164 aa6□□□□□ -1.45
SCN11A-202ENST00000444237 TACO1Q9BSH4 297 aaKnown RBP6□□□□□ -1.45
SCN11A-202ENST00000444237 TMEM51Q9NW97 253 aa6□□□□□ -1.45
SCN11A-202ENST00000444237 TERF2IPQ9NYB0 399 aa6□□□□□ -1.45
SCN11A-202ENST00000444237 KIF5BP33176 963 aa5.99□□□□□ -1.45
SCN11A-202ENST00000444237 FKBP5Q13451 457 aaPredicted RBP5.99□□□□□ -1.45
SCN11A-202ENST00000444237 ELF2Q15723 593 aa5.99□□□□□ -1.45
SCN11A-202ENST00000444237 MSL1Q68DK7 614 aa5.99□□□□□ -1.45
SCN11A-202ENST00000444237 WDR7Q9Y4E6 1490 aa5.99□□□□□ -1.45
SCN11A-202ENST00000444237 ERBB4Q15303 1308 aa5.99□□□□□ -1.45
SCN11A-202ENST00000444237 ATP8B1O43520 1251 aa5.99□□□□□ -1.45
SCN11A-202ENST00000444237 RLBP1P12271 317 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms