RNA–Protein interactions for RNA: ENST00000442971.1

SSXP3-201, Transcript of SSX family pseudogene 3, humanhuman

BASIC

Gene SSXP3, Length 1,300 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSXP3-201ENST00000442971 RGPD5Q99666 1765 aa11.14□□□□□ -0.63
SSXP3-201ENST00000442971 HMGB2P26583 209 aaKnown RBP11.13□□□□□ -0.63
SSXP3-201ENST00000442971 GRM1Q13255 1194 aa11.13□□□□□ -0.63
SSXP3-201ENST00000442971 PAXIP1Q6ZW49 1069 aaPredicted RBP11.13□□□□□ -0.63
SSXP3-201ENST00000442971 LDHDQ86WU2 507 aa11.13□□□□□ -0.63
SSXP3-201ENST00000442971 TRIOBPQ9H2D6 2365 aa11.13□□□□□ -0.63
SSXP3-201ENST00000442971 NSD2O96028 1365 aa11.13□□□□□ -0.63
SSXP3-201ENST00000442971 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.12□□□□□ -0.63
SSXP3-201ENST00000442971 WASLO00401 505 aaPredicted RBP11.12□□□□□ -0.63
SSXP3-201ENST00000442971 COLQQ9Y215 455 aaPredicted RBP11.12□□□□□ -0.63
SSXP3-201ENST00000442971 TOGARAM1Q9Y4F4 1720 aa11.12□□□□□ -0.63
SSXP3-201ENST00000442971 TAF1LQ8IZX4 1826 aa11.12□□□□□ -0.63
SSXP3-201ENST00000442971 ANKRD36BQ8N2N9 1353 aa11.12□□□□□ -0.63
SSXP3-201ENST00000442971 ATXN8OSP0DMR3 200 aa11.11□□□□□ -0.63
SSXP3-201ENST00000442971 IL2RBP14784 551 aa11.11□□□□□ -0.63
SSXP3-201ENST00000442971 MAP2K2P36507 400 aa11.11□□□□□ -0.63
SSXP3-201ENST00000442971 CYP4F22Q6NT55 531 aa11.11□□□□□ -0.63
SSXP3-201ENST00000442971 AK7Q96M32 723 aa11.11□□□□□ -0.63
SSXP3-201ENST00000442971 COL25A1Q9BXS0 654 aaPredicted RBP11.11□□□□□ -0.63
SSXP3-201ENST00000442971 CCDC88AQ3V6T2 1871 aa11.11□□□□□ -0.63
SSXP3-201ENST00000442971 CCDC87Q9NVE4 849 aa11.1□□□□□ -0.63
SSXP3-201ENST00000442971 UBR3Q6ZT12 1888 aa11.1□□□□□ -0.63
SSXP3-201ENST00000442971 ACEP12821 1306 aa11.1□□□□□ -0.63
SSXP3-201ENST00000442971 POLR3AO14802 1390 aaPredicted RBP11.1□□□□□ -0.63
SSXP3-201ENST00000442971 USP47Q96K76 1375 aa11.1□□□□□ -0.63
SSXP3-201ENST00000442971 NSD3Q9BZ95 1437 aa11.09□□□□□ -0.63
SSXP3-201ENST00000442971 C4BP0C0L5 1744 aa11.09□□□□□ -0.63
SSXP3-201ENST00000442971 AOC2O75106 756 aa11.09□□□□□ -0.63
SSXP3-201ENST00000442971 DDX54Q8TDD1 881 aaKnown RBP11.09□□□□□ -0.63
SSXP3-201ENST00000442971 NUDT16Q96DE0 195 aaKnown RBP11.09□□□□□ -0.63
SSXP3-201ENST00000442971 DOT1LQ8TEK3 1739 aa11.08□□□□□ -0.64
SSXP3-201ENST00000442971 PIK3C2GO75747 1445 aa11.08□□□□□ -0.64
SSXP3-201ENST00000442971 CPSF1Q10570 1443 aaKnown RBP11.08□□□□□ -0.64
SSXP3-201ENST00000442971 SSFA2P28290 1259 aa11.08□□□□□ -0.64
SSXP3-201ENST00000442971 PRDM6Q9NQX0 595 aa11.08□□□□□ -0.64
SSXP3-201ENST00000442971 SLIT3O75094 1523 aa11.07□□□□□ -0.64
SSXP3-201ENST00000442971 MKI67P46013 3256 aaKnown RBP11.07□□□□□ -0.64
SSXP3-201ENST00000442971 POLA2Q14181 598 aa11.07□□□□□ -0.64
SSXP3-201ENST00000442971 CACNA1AO00555 2505 aa11.06□□□□□ -0.64
SSXP3-201ENST00000442971 BRPF1P55201 1214 aaPredicted RBP11.05□□□□□ -0.64
SSXP3-201ENST00000442971 NLRP6P59044 892 aa11.05□□□□□ -0.64
SSXP3-201ENST00000442971 ARHGEF25Q86VW2 580 aa11.05□□□□□ -0.64
SSXP3-201ENST00000442971 HPS5Q9UPZ3 1129 aa11.05□□□□□ -0.64
SSXP3-201ENST00000442971 IQCA1LA6NCM1 817 aa11.04□□□□□ -0.64
SSXP3-201ENST00000442971 DDNO94850 711 aaPredicted RBP11.04□□□□□ -0.64
SSXP3-201ENST00000442971 CNTROBQ8N137 903 aa11.04□□□□□ -0.64
SSXP3-201ENST00000442971 TAF1DQ9H5J8 278 aaPredicted RBP11.04□□□□□ -0.64
SSXP3-201ENST00000442971 C14orf93Q9H972 538 aaKnown RBP11.04□□□□□ -0.64
SSXP3-201ENST00000442971 CLEC11AQ9Y240 323 aa11.04□□□□□ -0.64
SSXP3-201ENST00000442971 UNC80Q8N2C7 3258 aa11.04□□□□□ -0.64
SSXP3-201ENST00000442971 C4AP0C0L4 1744 aa11.03□□□□□ -0.64
SSXP3-201ENST00000442971 COL9A1P20849 921 aa11.03□□□□□ -0.64
SSXP3-201ENST00000442971 EAPPQ56P03 285 aaPredicted RBP11.03□□□□□ -0.64
SSXP3-201ENST00000442971 NLGN1Q8N2Q7 840 aa11.03□□□□□ -0.64
SSXP3-201ENST00000442971 NLRP2Q9NX02 1062 aa11.03□□□□□ -0.64
SSXP3-201ENST00000442971 CHRNA5P30532 468 aa11.02□□□□□ -0.65
SSXP3-201ENST00000442971 DDX21Q9NR30 783 aaKnown RBP eCLIP11.02□□□□□ -0.65
SSXP3-201ENST00000442971 SCN4AP35499 1836 aa11.01□□□□□ -0.65
SSXP3-201ENST00000442971 PLEKHG3A1L390 1219 aa11.01□□□□□ -0.65
SSXP3-201ENST00000442971 PLA2G5P39877 138 aa11.01□□□□□ -0.65
SSXP3-201ENST00000442971 TMF1P82094 1093 aa11.01□□□□□ -0.65
SSXP3-201ENST00000442971 FAM50AQ14320 339 aaKnown RBP11.01□□□□□ -0.65
SSXP3-201ENST00000442971 RGL3Q3MIN7 710 aa11.01□□□□□ -0.65
SSXP3-201ENST00000442971 CFAP70Q5T0N1 1121 aa11.01□□□□□ -0.65
SSXP3-201ENST00000442971 MAP1SQ66K74 1059 aaPredicted RBP11.01□□□□□ -0.65
SSXP3-201ENST00000442971 CTU1Q7Z7A3 348 aaKnown RBP11.01□□□□□ -0.65
SSXP3-201ENST00000442971 PARP3Q9Y6F1 533 aa11.01□□□□□ -0.65
SSXP3-201ENST00000442971 ERFEQ4G0M1 354 aa11□□□□□ -0.65
SSXP3-201ENST00000442971 CIAPIN1Q6FI81 312 aa11□□□□□ -0.65
SSXP3-201ENST00000442971 DICER1Q9UPY3 1922 aaKnown RBP10.99□□□□□ -0.65
SSXP3-201ENST00000442971 ADAMTSL1Q8N6G6 1762 aa10.99□□□□□ -0.65
SSXP3-201ENST00000442971 NFKBIEO00221 500 aa10.99□□□□□ -0.65
SSXP3-201ENST00000442971 ZBTB12Q9Y330 459 aaPredicted RBP10.99□□□□□ -0.65
SSXP3-201ENST00000442971 CEP290O15078 2479 aa10.99□□□□□ -0.65
SSXP3-201ENST00000442971 PALLDQ8WX93 1383 aa10.98□□□□□ -0.65
SSXP3-201ENST00000442971 NBPF1Q3BBV0 1214 aa10.98□□□□□ -0.65
SSXP3-201ENST00000442971 SNX27Q96L92 541 aa10.98□□□□□ -0.65
SSXP3-201ENST00000442971 TRAK1Q9UPV9 953 aa10.98□□□□□ -0.65
SSXP3-201ENST00000442971 TLL2Q9Y6L7 1015 aa10.98□□□□□ -0.65
SSXP3-201ENST00000442971 CCDC61Q9Y6R9 512 aa10.98□□□□□ -0.65
SSXP3-201ENST00000442971 ROCK1Q13464 1354 aa10.98□□□□□ -0.65
SSXP3-201ENST00000442971 FAM122AQ96E09 287 aa10.97□□□□□ -0.65
SSXP3-201ENST00000442971 L3MBTL3Q96JM7 780 aaPredicted RBP10.97□□□□□ -0.65
SSXP3-201ENST00000442971 GNPATO15228 680 aa10.96□□□□□ -0.65
SSXP3-201ENST00000442971 OTUD5Q96G74 571 aa10.96□□□□□ -0.65
SSXP3-201ENST00000442971 SOX12O15370 315 aa10.95□□□□□ -0.66
SSXP3-201ENST00000442971 KCNH5Q8NCM2 988 aa10.95□□□□□ -0.66
SSXP3-201ENST00000442971 RBM42Q9BTD8 480 aaKnown RBP10.95□□□□□ -0.66
SSXP3-201ENST00000442971 FMR1Q06787 632 aaKnown RBP eCLIP10.94□□□□□ -0.66
SSXP3-201ENST00000442971 PKN2Q16513 984 aaKnown RBP10.94□□□□□ -0.66
SSXP3-201ENST00000442971 CST9Q5W186 159 aa10.94□□□□□ -0.66
SSXP3-201ENST00000442971 VCANP13611 3396 aa10.94□□□□□ -0.66
SSXP3-201ENST00000442971 TRPM7Q96QT4 1865 aa10.93□□□□□ -0.66
SSXP3-201ENST00000442971 EPHX2P34913 555 aa10.93□□□□□ -0.66
SSXP3-201ENST00000442971 PNMA8AQ86V59 439 aaPredicted RBP10.93□□□□□ -0.66
SSXP3-201ENST00000442971 LINC00116Q8NCU8 138 aa10.93□□□□□ -0.66
SSXP3-201ENST00000442971 CDK19Q9BWU1 502 aa10.93□□□□□ -0.66
SSXP3-201ENST00000442971 RAPGEFL1Q9UHV5 662 aa10.93□□□□□ -0.66
SSXP3-201ENST00000442971 RANBP2P49792 3224 aaKnown RBP10.93□□□□□ -0.66
SSXP3-201ENST00000442971 GYS1P13807 737 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms