RNA–Protein interactions for RNA: ENST00000442009.6

POLR1E-203, Transcript of RNA polymerase I subunit E, humanhuman

TSL 2

Gene POLR1E, Length 1,805 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1E-203ENST00000442009 COL16A1Q07092 1604 aaPredicted RBP23.84■■□□□ 1.41
POLR1E-203ENST00000442009 HEG1Q9ULI3 1381 aa23.84■■□□□ 1.41
POLR1E-203ENST00000442009 BTBD11A6QL63 1104 aa23.84■■□□□ 1.41
POLR1E-203ENST00000442009 CYP27B1O15528 508 aa23.84■■□□□ 1.41
POLR1E-203ENST00000442009 HOXB7P09629 217 aa23.84■■□□□ 1.41
POLR1E-203ENST00000442009 IFNL2Q8IZJ0 200 aa23.84■■□□□ 1.41
POLR1E-203ENST00000442009 KCNQ3O43525 872 aa23.83■■□□□ 1.41
POLR1E-203ENST00000442009 CCDC30Q5VVM6 783 aa23.83■■□□□ 1.41
POLR1E-203ENST00000442009 INTS3Q68E01 1043 aaKnown RBP23.83■■□□□ 1.41
POLR1E-203ENST00000442009 TOM1L2Q6ZVM7 507 aa23.83■■□□□ 1.41
POLR1E-203ENST00000442009 COL14A1Q05707 1796 aaKnown RBP23.82■■□□□ 1.4
POLR1E-203ENST00000442009 PHLPP1O60346 1717 aa23.82■■□□□ 1.4
POLR1E-203ENST00000442009 LARP1Q6PKG0 1096 aaKnown RBP23.81■■□□□ 1.4
POLR1E-203ENST00000442009 G2E3Q7L622 706 aa23.81■■□□□ 1.4
POLR1E-203ENST00000442009 MRC1P22897 1456 aa23.81■■□□□ 1.4
POLR1E-203ENST00000442009 HDAC1Q13547 482 aaPredicted RBP23.8■■□□□ 1.4
POLR1E-203ENST00000442009 CHMP4BQ9H444 224 aaKnown RBP23.8■■□□□ 1.4
POLR1E-203ENST00000442009 RWDD1Q9H446 243 aaPredicted RBP23.8■■□□□ 1.4
POLR1E-203ENST00000442009 SKAP1Q86WV1 359 aa23.8■■□□□ 1.4
POLR1E-203ENST00000442009 DCAF5Q96JK2 942 aa23.8■■□□□ 1.4
POLR1E-203ENST00000442009 TOM1O60784 492 aa23.79■■□□□ 1.4
POLR1E-203ENST00000442009 STK31Q9BXU1 1019 aa23.79■■□□□ 1.4
POLR1E-203ENST00000442009 SLC52A2Q9HAB3 445 aa23.79■■□□□ 1.4
POLR1E-203ENST00000442009 RBM19Q9Y4C8 960 aaKnown RBP23.77■■□□□ 1.4
POLR1E-203ENST00000442009 SHANK3Q9BYB0 1731 aa23.77■■□□□ 1.4
POLR1E-203ENST00000442009 HSP90AB1P08238 724 aaKnown RBP23.77■■□□□ 1.4
POLR1E-203ENST00000442009 EVA1CP58658 441 aa23.77■■□□□ 1.4
POLR1E-203ENST00000442009 IL2RBP14784 551 aa23.76■■□□□ 1.39
POLR1E-203ENST00000442009 ZCRB1Q8TBF4 217 aaKnown RBP23.76■■□□□ 1.39
POLR1E-203ENST00000442009 CHMP4AQ9BY43 222 aa23.76■■□□□ 1.39
POLR1E-203ENST00000442009 STRN4Q9NRL3 753 aa23.76■■□□□ 1.39
POLR1E-203ENST00000442009 BTG4Q9NY30 223 aa23.76■■□□□ 1.39
POLR1E-203ENST00000442009 HDGFL1Q5TGJ6 251 aa23.75■■□□□ 1.39
POLR1E-203ENST00000442009 GIGYF1O75420 1035 aaPredicted RBP23.75■■□□□ 1.39
POLR1E-203ENST00000442009 FLIIQ13045 1269 aa23.74■■□□□ 1.39
POLR1E-203ENST00000442009 NKX1-1Q15270 411 aaPredicted RBP23.74■■□□□ 1.39
POLR1E-203ENST00000442009 NFATC2IPQ8NCF5 419 aa23.74■■□□□ 1.39
POLR1E-203ENST00000442009 PCDH11XQ9BZA7 1347 aa23.73■■□□□ 1.39
POLR1E-203ENST00000442009 PCDH11YQ9BZA8 1340 aa23.73■■□□□ 1.39
POLR1E-203ENST00000442009 ZNF790Q6PG37 636 aa23.72■■□□□ 1.39
POLR1E-203ENST00000442009 NECTIN2Q92692 538 aa23.72■■□□□ 1.39
POLR1E-203ENST00000442009 N4BP2Q86UW6 1770 aaPredicted RBP23.71■■□□□ 1.39
POLR1E-203ENST00000442009 SMC5Q8IY18 1101 aa23.7■■□□□ 1.39
POLR1E-203ENST00000442009 DISP2A7MBM2 1401 aa23.68■■□□□ 1.38
POLR1E-203ENST00000442009 F6X3S4 739 aa23.68■■□□□ 1.38
POLR1E-203ENST00000442009 EIF2S2P20042 333 aaKnown RBP23.68■■□□□ 1.38
POLR1E-203ENST00000442009 CCT4P50991 539 aaKnown RBP23.68■■□□□ 1.38
POLR1E-203ENST00000442009 PIP4K2BP78356 416 aa23.68■■□□□ 1.38
POLR1E-203ENST00000442009 SIRT2Q8IXJ6 389 aa23.68■■□□□ 1.38
POLR1E-203ENST00000442009 PLCH1Q4KWH8 1693 aa23.68■■□□□ 1.38
POLR1E-203ENST00000442009 SLC39A6Q13433 755 aa23.67■■□□□ 1.38
POLR1E-203ENST00000442009 FKBP5Q13451 457 aaPredicted RBP23.67■■□□□ 1.38
POLR1E-203ENST00000442009 PHAXQ9H814 394 aaKnown RBP23.67■■□□□ 1.38
POLR1E-203ENST00000442009 CHPF2Q9P2E5 772 aa23.67■■□□□ 1.38
POLR1E-203ENST00000442009 PDZRN3Q9UPQ7 1066 aa23.67■■□□□ 1.38
POLR1E-203ENST00000442009 ERVV-2B6SEH9 535 aa23.66■■□□□ 1.38
POLR1E-203ENST00000442009 PXDNLA1KZ92 1463 aa23.66■■□□□ 1.38
POLR1E-203ENST00000442009 DBF4Q9UBU7 674 aaPredicted RBP23.66■■□□□ 1.38
POLR1E-203ENST00000442009 NRAPQ86VF7 1730 aa23.65■■□□□ 1.38
POLR1E-203ENST00000442009 C5P01031 1676 aa23.65■■□□□ 1.38
POLR1E-203ENST00000442009 PRAMEF22A3QJZ6 481 aa23.65■■□□□ 1.38
POLR1E-203ENST00000442009 UBAP1LF5GYI3 381 aa23.65■■□□□ 1.38
POLR1E-203ENST00000442009 CABP4P57796 275 aa23.65■■□□□ 1.38
POLR1E-203ENST00000442009 C1orf115Q9H7X2 142 aa23.65■■□□□ 1.38
POLR1E-203ENST00000442009 GLI3P10071 1580 aa23.63■■□□□ 1.37
POLR1E-203ENST00000442009 PDE4AP27815 886 aa23.63■■□□□ 1.37
POLR1E-203ENST00000442009 ZNF496Q96IT1 587 aaPredicted RBP23.63■■□□□ 1.37
POLR1E-203ENST00000442009 BACH2Q9BYV9 841 aa23.63■■□□□ 1.37
POLR1E-203ENST00000442009 ATP10DQ9P241 1426 aa23.63■■□□□ 1.37
POLR1E-203ENST00000442009 MEIS3Q99687 375 aa23.63■■□□□ 1.37
POLR1E-203ENST00000442009 RGS3P49796 1198 aa23.62■■□□□ 1.37
POLR1E-203ENST00000442009 SLC4A10Q6U841 1118 aa23.62■■□□□ 1.37
POLR1E-203ENST00000442009 USP35Q9P2H5 1018 aa23.62■■□□□ 1.37
POLR1E-203ENST00000442009 WNK3Q9BYP7 1800 aa23.62■■□□□ 1.37
POLR1E-203ENST00000442009 UBR2Q8IWV8 1755 aa23.62■■□□□ 1.37
POLR1E-203ENST00000442009 PDIA6Q15084 440 aa23.61■■□□□ 1.37
POLR1E-203ENST00000442009 PAPPAQ13219 1627 aa23.61■■□□□ 1.37
POLR1E-203ENST00000442009 DDX54Q8TDD1 881 aaKnown RBP23.61■■□□□ 1.37
POLR1E-203ENST00000442009 TOGARAM1Q9Y4F4 1720 aa23.6■■□□□ 1.37
POLR1E-203ENST00000442009 ADAMTS2O95450 1211 aa23.6■■□□□ 1.37
POLR1E-203ENST00000442009 NWD2Q9ULI1 1742 aa23.6■■□□□ 1.37
POLR1E-203ENST00000442009 PROSER3Q2NL68 480 aa23.59■■□□□ 1.37
POLR1E-203ENST00000442009 RPAP2Q8IXW5 612 aaPredicted RBP23.59■■□□□ 1.37
POLR1E-203ENST00000442009 ANKRD44Q8N8A2 993 aa23.59■■□□□ 1.37
POLR1E-203ENST00000442009 DDX21Q9NR30 783 aaKnown RBP eCLIP23.59■■□□□ 1.37
POLR1E-203ENST00000442009 ANXA1P04083 346 aa23.59■■□□□ 1.37
POLR1E-203ENST00000442009 GCC1Q96CN9 775 aa23.59■■□□□ 1.37
POLR1E-203ENST00000442009 FMNL2Q96PY5 1086 aa23.59■■□□□ 1.37
POLR1E-203ENST00000442009 HYPKQ9NX55 129 aa23.59■■□□□ 1.37
POLR1E-203ENST00000442009 SLIT2O94813 1529 aa23.58■■□□□ 1.37
POLR1E-203ENST00000442009 SNRPA1P09661 255 aaKnown RBP23.58■■□□□ 1.37
POLR1E-203ENST00000442009 TTC5Q8N0Z6 440 aa23.58■■□□□ 1.37
POLR1E-203ENST00000442009 ADCY9O60503 1353 aa23.57■■□□□ 1.36
POLR1E-203ENST00000442009 NUCB1Q02818 461 aa23.57■■□□□ 1.36
POLR1E-203ENST00000442009 CEP85Q6P2H3 762 aa23.57■■□□□ 1.36
POLR1E-203ENST00000442009 PI4KAP2A4QPH2 592 aa23.56■■□□□ 1.36
POLR1E-203ENST00000442009 PI4KAP1Q8N8J0 262 aa23.56■■□□□ 1.36
POLR1E-203ENST00000442009 SPATA31A1Q5TZJ5 1347 aa23.56■■□□□ 1.36
POLR1E-203ENST00000442009 TNS2Q63HR2 1409 aa23.55■■□□□ 1.36
POLR1E-203ENST00000442009 LAMB4A4D0S4 1761 aa23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms