RNA–Protein interactions for RNA: ENST00000441350.2

VPS13B-204, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 1,626 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-204ENST00000441350 RBM6P78332 1123 aaKnown RBP27.37■■□□□ 1.97
VPS13B-204ENST00000441350 TSPYL4Q9UJ04 414 aa27.37■■□□□ 1.97
VPS13B-204ENST00000441350 A0A0G2JS52 829 aa27.36■■□□□ 1.97
VPS13B-204ENST00000441350 MYT1Q01538 1121 aa27.36■■□□□ 1.97
VPS13B-204ENST00000441350 SEPT12Q8IYM1 358 aa27.35■■□□□ 1.97
VPS13B-204ENST00000441350 NFATC2IPQ8NCF5 419 aa27.35■■□□□ 1.97
VPS13B-204ENST00000441350 KDM3BQ7LBC6 1761 aa27.35■■□□□ 1.97
VPS13B-204ENST00000441350 EXOSC9Q06265 439 aaKnown RBP27.34■■□□□ 1.97
VPS13B-204ENST00000441350 CABP4P57796 275 aa27.34■■□□□ 1.97
VPS13B-204ENST00000441350 BTBD11A6QL63 1104 aa27.33■■□□□ 1.97
VPS13B-204ENST00000441350 ITGB4P16144 1822 aa27.3■■□□□ 1.96
VPS13B-204ENST00000441350 DOT1LQ8TEK3 1739 aa27.29■■□□□ 1.96
VPS13B-204ENST00000441350 CT47B1P0C2W7 299 aaPredicted RBP27.29■■□□□ 1.96
VPS13B-204ENST00000441350 POTEAQ6S8J7 498 aa27.28■■□□□ 1.96
VPS13B-204ENST00000441350 C8orf58Q8NAV2 365 aa27.28■■□□□ 1.96
VPS13B-204ENST00000441350 KCNQ3O43525 872 aa27.27■■□□□ 1.96
VPS13B-204ENST00000441350 RXRBP28702 533 aa27.27■■□□□ 1.96
VPS13B-204ENST00000441350 RCAN3Q9UKA8 241 aa27.27■■□□□ 1.96
VPS13B-204ENST00000441350 TMOD3Q9NYL9 352 aa27.27■■□□□ 1.96
VPS13B-204ENST00000441350 BRWD3Q6RI45 1802 aa27.26■■□□□ 1.95
VPS13B-204ENST00000441350 BCL9O00512 1426 aa27.26■■□□□ 1.95
VPS13B-204ENST00000441350 TSPYL6Q8N831 410 aa27.26■■□□□ 1.95
VPS13B-204ENST00000441350 EIF4A1P60842 406 aaKnown RBP27.25■■□□□ 1.95
VPS13B-204ENST00000441350 KRT24Q2M2I5 525 aa27.25■■□□□ 1.95
VPS13B-204ENST00000441350 ZNF790Q6PG37 636 aa27.25■■□□□ 1.95
VPS13B-204ENST00000441350 PAPPAQ13219 1627 aa27.25■■□□□ 1.95
VPS13B-204ENST00000441350 PIGBQ92521 554 aa27.24■■□□□ 1.95
VPS13B-204ENST00000441350 KAT6BQ8WYB5 2073 aa27.23■■□□□ 1.95
VPS13B-204ENST00000441350 VAMP4O75379 141 aa27.23■■□□□ 1.95
VPS13B-204ENST00000441350 PRIM1P49642 420 aaKnown RBP27.23■■□□□ 1.95
VPS13B-204ENST00000441350 SLC39A6Q13433 755 aa27.23■■□□□ 1.95
VPS13B-204ENST00000441350 TWISTNBQ3B726 338 aaPredicted RBP27.23■■□□□ 1.95
VPS13B-204ENST00000441350 HEG1Q9ULI3 1381 aa27.23■■□□□ 1.95
VPS13B-204ENST00000441350 ELL2O00472 640 aaPredicted RBP27.21■■□□□ 1.95
VPS13B-204ENST00000441350 KRT27Q7Z3Y8 459 aa27.2■■□□□ 1.95
VPS13B-204ENST00000441350 ZNF428Q96B54 188 aa27.2■■□□□ 1.95
VPS13B-204ENST00000441350 UBR2Q8IWV8 1755 aa27.2■■□□□ 1.94
VPS13B-204ENST00000441350 SOS1Q07889 1333 aaPredicted RBP27.2■■□□□ 1.94
VPS13B-204ENST00000441350 RARSP54136 660 aaKnown RBP27.19■■□□□ 1.94
VPS13B-204ENST00000441350 ACSBG1Q96GR2 724 aa27.19■■□□□ 1.94
VPS13B-204ENST00000441350 FAM182BQ5T319 152 aa27.19■■□□□ 1.94
VPS13B-204ENST00000441350 TTC5Q8N0Z6 440 aa27.19■■□□□ 1.94
VPS13B-204ENST00000441350 SYTL4Q96C24 671 aaPredicted RBP27.19■■□□□ 1.94
VPS13B-204ENST00000441350 RGS12O14924 1447 aa27.18■■□□□ 1.94
VPS13B-204ENST00000441350 ZNF496Q96IT1 587 aaPredicted RBP27.17■■□□□ 1.94
VPS13B-204ENST00000441350 SUPT16HQ9Y5B9 1047 aaKnown RBP27.17■■□□□ 1.94
VPS13B-204ENST00000441350 KCPQ6ZWJ8 1503 aa27.16■■□□□ 1.94
VPS13B-204ENST00000441350 HOXB7P09629 217 aa27.16■■□□□ 1.94
VPS13B-204ENST00000441350 ATG3Q9NT62 314 aa27.16■■□□□ 1.94
VPS13B-204ENST00000441350 SBF2Q86WG5 1849 aa27.16■■□□□ 1.94
VPS13B-204ENST00000441350 RNF123Q5XPI4 1314 aa27.16■■□□□ 1.94
VPS13B-204ENST00000441350 NHSQ6T4R5 1651 aa27.16■■□□□ 1.94
VPS13B-204ENST00000441350 KCNQ2O43526 872 aa27.16■■□□□ 1.94
VPS13B-204ENST00000441350 GIGYF1O75420 1035 aaPredicted RBP27.16■■□□□ 1.94
VPS13B-204ENST00000441350 ASAP1Q9ULH1 1129 aa27.16■■□□□ 1.94
VPS13B-204ENST00000441350 ALDH1L2Q3SY69 923 aa27.15■■□□□ 1.94
VPS13B-204ENST00000441350 FMNL2Q96PY5 1086 aa27.15■■□□□ 1.94
VPS13B-204ENST00000441350 SSH1Q8WYL5 1049 aa27.14■■□□□ 1.94
VPS13B-204ENST00000441350 BCAR3O75815 825 aa27.13■■□□□ 1.93
VPS13B-204ENST00000441350 FAM196AQ6ZSG2 479 aa27.12■■□□□ 1.93
VPS13B-204ENST00000441350 C5P01031 1676 aa27.1■■□□□ 1.93
VPS13B-204ENST00000441350 SNRPA1P09661 255 aaKnown RBP27.09■■□□□ 1.93
VPS13B-204ENST00000441350 BRPF1P55201 1214 aaPredicted RBP27.09■■□□□ 1.93
VPS13B-204ENST00000441350 PTF1AQ7RTS3 328 aa27.09■■□□□ 1.93
VPS13B-204ENST00000441350 BCL2L13Q9BXK5 485 aa27.09■■□□□ 1.93
VPS13B-204ENST00000441350 PRAMEF22A3QJZ6 481 aa27.08■■□□□ 1.93
VPS13B-204ENST00000441350 PTCD1O75127 700 aaKnown RBP27.08■■□□□ 1.93
VPS13B-204ENST00000441350 SMC4Q9NTJ3 1288 aa27.08■■□□□ 1.93
VPS13B-204ENST00000441350 BTAF1O14981 1849 aa27.08■■□□□ 1.93
VPS13B-204ENST00000441350 RRP1P56182 461 aaKnown RBP27.07■■□□□ 1.92
VPS13B-204ENST00000441350 CCDC30Q5VVM6 783 aa27.07■■□□□ 1.92
VPS13B-204ENST00000441350 CHMP4AQ9BY43 222 aa27.07■■□□□ 1.92
VPS13B-204ENST00000441350 HDGFL1Q5TGJ6 251 aa27.06■■□□□ 1.92
VPS13B-204ENST00000441350 VSIG10Q8N0Z9 540 aa27.06■■□□□ 1.92
VPS13B-204ENST00000441350 MRPL50Q8N5N7 158 aaKnown RBP27.06■■□□□ 1.92
VPS13B-204ENST00000441350 TCERG1O14776 1098 aaKnown RBP27.05■■□□□ 1.92
VPS13B-204ENST00000441350 SMARCC1Q92922 1105 aaPredicted RBP27.05■■□□□ 1.92
VPS13B-204ENST00000441350 BCL11BQ9C0K0 894 aaPredicted RBP27.05■■□□□ 1.92
VPS13B-204ENST00000441350 LAMB4A4D0S4 1761 aa27.05■■□□□ 1.92
VPS13B-204ENST00000441350 CACNA1FO60840 1977 aa27.04■■□□□ 1.92
VPS13B-204ENST00000441350 EIF2S2P20042 333 aaKnown RBP27.04■■□□□ 1.92
VPS13B-204ENST00000441350 SLC4A9Q96Q91 983 aa27.03■■□□□ 1.92
VPS13B-204ENST00000441350 USP16Q9Y5T5 823 aa27.03■■□□□ 1.92
VPS13B-204ENST00000441350 PALLDQ8WX93 1383 aa27.03■■□□□ 1.92
VPS13B-204ENST00000441350 NECTIN2Q92692 538 aa27.02■■□□□ 1.92
VPS13B-204ENST00000441350 RBM42Q9BTD8 480 aaKnown RBP27.02■■□□□ 1.92
VPS13B-204ENST00000441350 STK31Q9BXU1 1019 aa27.01■■□□□ 1.92
VPS13B-204ENST00000441350 EP400Q96L91 3159 aa27.01■■□□□ 1.91
VPS13B-204ENST00000441350 KIF16BQ96L93 1317 aa27.01■■□□□ 1.91
VPS13B-204ENST00000441350 PLIN1O60240 522 aa27.01■■□□□ 1.91
VPS13B-204ENST00000441350 SLC4A2P04920 1241 aa27.01■■□□□ 1.91
VPS13B-204ENST00000441350 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.01■■□□□ 1.91
VPS13B-204ENST00000441350 TEX13AQ9BXU3 409 aaPredicted RBP27■■□□□ 1.91
VPS13B-204ENST00000441350 CICQ96RK0 1608 aaPredicted RBP27■■□□□ 1.91
VPS13B-204ENST00000441350 ZNF831Q5JPB2 1677 aa26.99■■□□□ 1.91
VPS13B-204ENST00000441350 TJP1Q07157 1748 aa26.98■■□□□ 1.91
VPS13B-204ENST00000441350 LOC102724428A0A0B4J2F2 783 aa26.98■■□□□ 1.91
VPS13B-204ENST00000441350 SIK1P57059 783 aa26.98■■□□□ 1.91
VPS13B-204ENST00000441350 CHPF2Q9P2E5 772 aa26.98■■□□□ 1.91
VPS13B-204ENST00000441350 NOB1Q9ULX3 412 aaKnown RBP26.98■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms