RNA–Protein interactions for RNA: ENST00000441214.1

LINC01271-201, Transcript of long intergenic non-protein coding RNA 1271, humanhuman

TSL 1 (best) BASIC

Gene LINC01271, Length 2,250 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01271-201ENST00000441214 ZKSCAN5Q9Y2L8 839 aa17.07■□□□□ 0.32
LINC01271-201ENST00000441214 APAF1O14727 1248 aa17.06■□□□□ 0.32
LINC01271-201ENST00000441214 GRIPAP1Q4V328 841 aa17.06■□□□□ 0.32
LINC01271-201ENST00000441214 SPATA31A3Q5VYP0 1347 aa17.06■□□□□ 0.32
LINC01271-201ENST00000441214 ALS2Q96Q42 1657 aa17.06■□□□□ 0.32
LINC01271-201ENST00000441214 EIF4A2Q14240 407 aaKnown RBP17.05■□□□□ 0.32
LINC01271-201ENST00000441214 TNS3Q68CZ2 1445 aa17.05■□□□□ 0.32
LINC01271-201ENST00000441214 LTN1O94822 1766 aa17.05■□□□□ 0.32
LINC01271-201ENST00000441214 MAPK8IP2Q13387 824 aaPredicted RBP17.05■□□□□ 0.32
LINC01271-201ENST00000441214 CHRNA2Q15822 529 aa17.05■□□□□ 0.32
LINC01271-201ENST00000441214 FEZ1Q99689 392 aa17.05■□□□□ 0.32
LINC01271-201ENST00000441214 TBC1D2Q9BYX2 928 aa17.05■□□□□ 0.32
LINC01271-201ENST00000441214 PNPLA6Q8IY17 1366 aa17.05■□□□□ 0.32
LINC01271-201ENST00000441214 MED1Q15648 1581 aaPredicted RBP17.05■□□□□ 0.32
LINC01271-201ENST00000441214 AEBP1Q8IUX7 1158 aa17.04■□□□□ 0.32
LINC01271-201ENST00000441214 IL13P35225 146 aa17.04■□□□□ 0.32
LINC01271-201ENST00000441214 CDK12Q9NYV4 1490 aaPredicted RBP17.03■□□□□ 0.32
LINC01271-201ENST00000441214 HOXC9P31274 260 aa17.03■□□□□ 0.32
LINC01271-201ENST00000441214 ZNF710Q8N1W2 664 aa17.03■□□□□ 0.32
LINC01271-201ENST00000441214 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.03■□□□□ 0.32
LINC01271-201ENST00000441214 SOS2Q07890 1332 aaPredicted RBP17.03■□□□□ 0.32
LINC01271-201ENST00000441214 BLMP54132 1417 aaPredicted RBP17.03■□□□□ 0.32
LINC01271-201ENST00000441214 USHBP1Q8N6Y0 703 aa17.03■□□□□ 0.32
LINC01271-201ENST00000441214 NFAT5O94916 1531 aa17.02■□□□□ 0.32
LINC01271-201ENST00000441214 CERS3Q8IU89 383 aa17.02■□□□□ 0.32
LINC01271-201ENST00000441214 PDLIM2Q96JY6 352 aa17.02■□□□□ 0.32
LINC01271-201ENST00000441214 UPF2Q9HAU5 1272 aaKnown RBP17.02■□□□□ 0.32
LINC01271-201ENST00000441214 FBXO3Q9UK99 471 aa17.02■□□□□ 0.32
LINC01271-201ENST00000441214 MYCNP04198 464 aaPredicted RBP17.01■□□□□ 0.31
LINC01271-201ENST00000441214 CALCOCO1Q9P1Z2 691 aa17.01■□□□□ 0.31
LINC01271-201ENST00000441214 AXIN2Q9Y2T1 843 aa17.01■□□□□ 0.31
LINC01271-201ENST00000441214 SBNO1A3KN83 1393 aa17.01■□□□□ 0.31
LINC01271-201ENST00000441214 TOM1O60784 492 aa17.01■□□□□ 0.31
LINC01271-201ENST00000441214 FLT4P35916 1363 aa17.01■□□□□ 0.31
LINC01271-201ENST00000441214 PRKAR2BP31323 418 aa17■□□□□ 0.31
LINC01271-201ENST00000441214 KCNH5Q8NCM2 988 aa17■□□□□ 0.31
LINC01271-201ENST00000441214 HSP90AB1P08238 724 aaKnown RBP17■□□□□ 0.31
LINC01271-201ENST00000441214 SULT6B1Q6IMI4 303 aa17■□□□□ 0.31
LINC01271-201ENST00000441214 LRRC59Q96AG4 307 aaKnown RBP17■□□□□ 0.31
LINC01271-201ENST00000441214 CDCA7LQ96GN5 454 aa17■□□□□ 0.31
LINC01271-201ENST00000441214 NHSL1Q5SYE7 1610 aa17■□□□□ 0.31
LINC01271-201ENST00000441214 TCP11L2Q8N4U5 519 aa16.99■□□□□ 0.31
LINC01271-201ENST00000441214 CERKQ8TCT0 537 aa16.99■□□□□ 0.31
LINC01271-201ENST00000441214 PHACTR3Q96KR7 559 aa16.99■□□□□ 0.31
LINC01271-201ENST00000441214 USP54Q70EL1 1684 aa16.98■□□□□ 0.31
LINC01271-201ENST00000441214 PHF14O94880 888 aa16.98■□□□□ 0.31
LINC01271-201ENST00000441214 ARHGEF25Q86VW2 580 aa16.98■□□□□ 0.31
LINC01271-201ENST00000441214 OGFRQ9NZT2 677 aa16.98■□□□□ 0.31
LINC01271-201ENST00000441214 RGPD5Q99666 1765 aa16.98■□□□□ 0.31
LINC01271-201ENST00000441214 NGEFQ8N5V2 710 aa16.98■□□□□ 0.31
LINC01271-201ENST00000441214 RUNDC1Q96C34 613 aa16.98■□□□□ 0.31
LINC01271-201ENST00000441214 KIAA0232Q92628 1395 aa16.97■□□□□ 0.31
LINC01271-201ENST00000441214 SLIT3O75094 1523 aa16.97■□□□□ 0.31
LINC01271-201ENST00000441214 TRIM6-TRIM34B2RNG4 842 aa16.97■□□□□ 0.31
LINC01271-201ENST00000441214 CEP120Q8N960 986 aa16.97■□□□□ 0.31
LINC01271-201ENST00000441214 TBC1D32Q96NH3 1257 aa16.97■□□□□ 0.31
LINC01271-201ENST00000441214 GBP4Q96PP9 640 aa16.97■□□□□ 0.31
LINC01271-201ENST00000441214 EYA1Q99502 592 aa16.97■□□□□ 0.31
LINC01271-201ENST00000441214 TRIM34Q9BYJ4 488 aa16.97■□□□□ 0.31
LINC01271-201ENST00000441214 PHRF1Q9P1Y6 1649 aaKnown RBP16.97■□□□□ 0.31
LINC01271-201ENST00000441214 ARHGEF10O15013 1369 aa16.97■□□□□ 0.31
LINC01271-201ENST00000441214 PDCL2Q8N4E4 241 aa16.96■□□□□ 0.31
LINC01271-201ENST00000441214 CCDC39Q9UFE4 941 aa16.96■□□□□ 0.31
LINC01271-201ENST00000441214 PLEKHF1Q96S99 279 aa16.96■□□□□ 0.31
LINC01271-201ENST00000441214 INSRP06213 1382 aa16.96■□□□□ 0.31
LINC01271-201ENST00000441214 MAPK8IP3Q9UPT6 1336 aa16.96■□□□□ 0.3
LINC01271-201ENST00000441214 IP6K1Q92551 441 aa16.95■□□□□ 0.3
LINC01271-201ENST00000441214 RGPD2P0DJD1 1756 aa16.95■□□□□ 0.3
LINC01271-201ENST00000441214 PATL2C9JE40 543 aaKnown RBP16.95■□□□□ 0.3
LINC01271-201ENST00000441214 CAPN2P17655 700 aa16.95■□□□□ 0.3
LINC01271-201ENST00000441214 PHLPP1O60346 1717 aa16.94■□□□□ 0.3
LINC01271-201ENST00000441214 NUTM2BA6NNL0 878 aaPredicted RBP16.94■□□□□ 0.3
LINC01271-201ENST00000441214 NUTM2EB1AL46 878 aaPredicted RBP16.94■□□□□ 0.3
LINC01271-201ENST00000441214 MCCP23508 829 aa16.94■□□□□ 0.3
LINC01271-201ENST00000441214 NUTM2AQ8IVF1 878 aaPredicted RBP16.94■□□□□ 0.3
LINC01271-201ENST00000441214 CARD10Q9BWT7 1032 aa16.94■□□□□ 0.3
LINC01271-201ENST00000441214 PRDM11Q9NQV5 511 aa16.94■□□□□ 0.3
LINC01271-201ENST00000441214 PLIN1O60240 522 aa16.93■□□□□ 0.3
LINC01271-201ENST00000441214 NBPF6Q5VWK0 638 aa16.93■□□□□ 0.3
LINC01271-201ENST00000441214 ANKRD24Q8TF21 1146 aa16.93■□□□□ 0.3
LINC01271-201ENST00000441214 NBPF4Q96M43 638 aa16.93■□□□□ 0.3
LINC01271-201ENST00000441214 CIZ1Q9ULV3 898 aaPredicted RBP16.93■□□□□ 0.3
LINC01271-201ENST00000441214 CRYBG1Q9Y4K1 1723 aa16.93■□□□□ 0.3
LINC01271-201ENST00000441214 CREBRFQ8IUR6 639 aa16.93■□□□□ 0.3
LINC01271-201ENST00000441214 ADAMTS2O95450 1211 aa16.92■□□□□ 0.3
LINC01271-201ENST00000441214 SLFN14P0C7P3 912 aa16.92■□□□□ 0.3
LINC01271-201ENST00000441214 SPINK5Q9NQ38 1064 aaPredicted RBP16.92■□□□□ 0.3
LINC01271-201ENST00000441214 FCHSD2O94868 740 aa16.91■□□□□ 0.3
LINC01271-201ENST00000441214 MFAP1P55081 439 aaKnown RBP16.91■□□□□ 0.3
LINC01271-201ENST00000441214 SPDYE4A6NLX3 237 aa16.91■□□□□ 0.3
LINC01271-201ENST00000441214 THUMPD2Q9BTF0 503 aaKnown RBP16.91■□□□□ 0.3
LINC01271-201ENST00000441214 SEC24BO95487 1268 aa16.9■□□□□ 0.3
LINC01271-201ENST00000441214 CSB-PGBD3P0DP91 1061 aa16.9■□□□□ 0.3
LINC01271-201ENST00000441214 TMPOP42166 694 aaKnown RBP16.9■□□□□ 0.3
LINC01271-201ENST00000441214 STRN4Q9NRL3 753 aa16.9■□□□□ 0.3
LINC01271-201ENST00000441214 ZNF445P59923 1031 aa16.9■□□□□ 0.3
LINC01271-201ENST00000441214 KIAA2012Q0VF49 1180 aa16.9■□□□□ 0.3
LINC01271-201ENST00000441214 CTR9Q6PD62 1173 aa16.9■□□□□ 0.3
LINC01271-201ENST00000441214 IQSEC2Q5JU85 1478 aa16.89■□□□□ 0.29
LINC01271-201ENST00000441214 FAM83GA6ND36 823 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms