RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 ITSN1Q15811 1721 aa16.62■□□□□ 0.25
HERPUD1-204ENST00000439977 FOXD4L6Q3SYB3 417 aaPredicted RBP16.62■□□□□ 0.25
HERPUD1-204ENST00000439977 FOXD4L3Q6VB84 417 aaPredicted RBP16.62■□□□□ 0.25
HERPUD1-204ENST00000439977 LRRCC1Q9C099 1032 aa16.62■□□□□ 0.25
HERPUD1-204ENST00000439977 CEP170BQ9Y4F5 1589 aaPredicted RBP16.62■□□□□ 0.25
HERPUD1-204ENST00000439977 PRPF40AO75400 957 aaKnown RBP16.62■□□□□ 0.25
HERPUD1-204ENST00000439977 UNC5CLQ8IV45 518 aa16.62■□□□□ 0.25
HERPUD1-204ENST00000439977 AK9Q5TCS8 1911 aa16.61■□□□□ 0.25
HERPUD1-204ENST00000439977 CCDC30Q5VVM6 783 aa16.61■□□□□ 0.25
HERPUD1-204ENST00000439977 TRIM44Q96DX7 344 aaPredicted RBP16.61■□□□□ 0.25
HERPUD1-204ENST00000439977 ANO2Q9NQ90 1003 aa16.61■□□□□ 0.25
HERPUD1-204ENST00000439977 PALD1Q9ULE6 856 aa16.61■□□□□ 0.25
HERPUD1-204ENST00000439977 IGSF1Q8N6C5 1336 aa16.61■□□□□ 0.25
HERPUD1-204ENST00000439977 SBNO1A3KN83 1393 aa16.61■□□□□ 0.25
HERPUD1-204ENST00000439977 ARHGEF10O15013 1369 aa16.61■□□□□ 0.25
HERPUD1-204ENST00000439977 NAP1L5Q96NT1 182 aaPredicted RBP16.61■□□□□ 0.25
HERPUD1-204ENST00000439977 PLEKHG1Q9ULL1 1385 aa16.6■□□□□ 0.25
HERPUD1-204ENST00000439977 MX1P20591 662 aa16.6■□□□□ 0.25
HERPUD1-204ENST00000439977 HOXC9P31274 260 aa16.6■□□□□ 0.25
HERPUD1-204ENST00000439977 AKAP12Q02952 1782 aa16.6■□□□□ 0.25
HERPUD1-204ENST00000439977 NUTM1Q86Y26 1132 aa16.6■□□□□ 0.25
HERPUD1-204ENST00000439977 RBM27Q9P2N5 1060 aaKnown RBP16.6■□□□□ 0.25
HERPUD1-204ENST00000439977 ANXA1P04083 346 aa16.59■□□□□ 0.25
HERPUD1-204ENST00000439977 NUCB2P80303 420 aa16.59■□□□□ 0.25
HERPUD1-204ENST00000439977 UPF3BQ9BZI7 483 aaKnown RBP16.59■□□□□ 0.25
HERPUD1-204ENST00000439977 ZDHHC9Q9Y397 364 aa16.59■□□□□ 0.25
HERPUD1-204ENST00000439977 TTC21AQ8NDW8 1320 aa16.59■□□□□ 0.25
HERPUD1-204ENST00000439977 SSH2Q76I76 1423 aa16.59■□□□□ 0.25
HERPUD1-204ENST00000439977 KCNA6P17658 529 aa16.59■□□□□ 0.25
HERPUD1-204ENST00000439977 KLHL40Q2TBA0 621 aa16.59■□□□□ 0.25
HERPUD1-204ENST00000439977 ESPNB1AK53 854 aa16.58■□□□□ 0.24
HERPUD1-204ENST00000439977 HDGFL1Q5TGJ6 251 aa16.58■□□□□ 0.24
HERPUD1-204ENST00000439977 USP44Q9H0E7 712 aa16.58■□□□□ 0.24
HERPUD1-204ENST00000439977 LMBRD1Q9NUN5 540 aa16.58■□□□□ 0.24
HERPUD1-204ENST00000439977 NRKQ7Z2Y5 1582 aa16.58■□□□□ 0.24
HERPUD1-204ENST00000439977 NASPP49321 788 aaPredicted RBP16.58■□□□□ 0.24
HERPUD1-204ENST00000439977 TPRNQ4KMQ1 711 aa16.58■□□□□ 0.24
HERPUD1-204ENST00000439977 IL25Q9H293 177 aa16.58■□□□□ 0.24
HERPUD1-204ENST00000439977 GNAI3P08754 354 aa16.57■□□□□ 0.24
HERPUD1-204ENST00000439977 ATP8B2P98198 1209 aa16.57■□□□□ 0.24
HERPUD1-204ENST00000439977 TMX3Q96JJ7 454 aa16.57■□□□□ 0.24
HERPUD1-204ENST00000439977 ESYT1Q9BSJ8 1104 aa16.57■□□□□ 0.24
HERPUD1-204ENST00000439977 CYP2E1P05181 493 aaPredicted RBP16.57■□□□□ 0.24
HERPUD1-204ENST00000439977 OSBPL3Q9H4L5 887 aa16.57■□□□□ 0.24
HERPUD1-204ENST00000439977 KDRP35968 1356 aa16.57■□□□□ 0.24
HERPUD1-204ENST00000439977 UBTFL1P0CB47 393 aaPredicted RBP16.56■□□□□ 0.24
HERPUD1-204ENST00000439977 TAF7Q15545 349 aaPredicted RBP16.56■□□□□ 0.24
HERPUD1-204ENST00000439977 CLCN1P35523 988 aa16.56■□□□□ 0.24
HERPUD1-204ENST00000439977 LGR6Q9HBX8 967 aa16.56■□□□□ 0.24
HERPUD1-204ENST00000439977 DTNBO60941 627 aa16.56■□□□□ 0.24
HERPUD1-204ENST00000439977 SURF6O75683 361 aaKnown RBP16.56■□□□□ 0.24
HERPUD1-204ENST00000439977 CHMLP26374 656 aa16.56■□□□□ 0.24
HERPUD1-204ENST00000439977 NSFL1CQ9UNZ2 370 aaKnown RBP16.56■□□□□ 0.24
HERPUD1-204ENST00000439977 KCNQ3O43525 872 aa16.55■□□□□ 0.24
HERPUD1-204ENST00000439977 ZSCAN23Q3MJ62 389 aa16.55■□□□□ 0.24
HERPUD1-204ENST00000439977 CLEC17AQ6ZS10 378 aa16.55■□□□□ 0.24
HERPUD1-204ENST00000439977 LARP6Q9BRS8 491 aaKnown RBP16.55■□□□□ 0.24
HERPUD1-204ENST00000439977 PTMSP20962 102 aa16.55■□□□□ 0.24
HERPUD1-204ENST00000439977 ISY1Q9ULR0 285 aaKnown RBP16.55■□□□□ 0.24
HERPUD1-204ENST00000439977 TBX22Q9Y458 520 aa16.55■□□□□ 0.24
HERPUD1-204ENST00000439977 UBR1Q8IWV7 1749 aa16.54■□□□□ 0.24
HERPUD1-204ENST00000439977 GPT2Q8TD30 523 aa16.54■□□□□ 0.24
HERPUD1-204ENST00000439977 SALL3Q9BXA9 1300 aa16.54■□□□□ 0.24
HERPUD1-204ENST00000439977 NBPF7P0C2Y1 421 aaPredicted RBP16.54■□□□□ 0.24
HERPUD1-204ENST00000439977 PPP1R42Q7Z4L9 355 aa16.54■□□□□ 0.24
HERPUD1-204ENST00000439977 CWC22Q9HCG8 908 aaKnown RBP16.54■□□□□ 0.24
HERPUD1-204ENST00000439977 PRIM1P49642 420 aaKnown RBP16.52■□□□□ 0.24
HERPUD1-204ENST00000439977 SRGAP3O43295 1099 aa16.52■□□□□ 0.24
HERPUD1-204ENST00000439977 LRRC59Q96AG4 307 aaKnown RBP16.52■□□□□ 0.24
HERPUD1-204ENST00000439977 MAP3K5Q99683 1374 aa16.52■□□□□ 0.24
HERPUD1-204ENST00000439977 IBTKQ9P2D0 1353 aaPredicted RBP16.52■□□□□ 0.24
HERPUD1-204ENST00000439977 NBPF6Q5VWK0 638 aa16.52■□□□□ 0.23
HERPUD1-204ENST00000439977 NBPF4Q96M43 638 aa16.52■□□□□ 0.23
HERPUD1-204ENST00000439977 GDPD2Q9HCC8 539 aa16.52■□□□□ 0.23
HERPUD1-204ENST00000439977 CHPF2Q9P2E5 772 aa16.52■□□□□ 0.23
HERPUD1-204ENST00000439977 XPCQ01831 940 aaPredicted RBP16.51■□□□□ 0.23
HERPUD1-204ENST00000439977 RBSNQ9H1K0 784 aa16.51■□□□□ 0.23
HERPUD1-204ENST00000439977 PI4KAP2A4QPH2 592 aa16.51■□□□□ 0.23
HERPUD1-204ENST00000439977 PI4KAP1Q8N8J0 262 aa16.51■□□□□ 0.23
HERPUD1-204ENST00000439977 RGPD1P0DJD0 1748 aa16.51■□□□□ 0.23
HERPUD1-204ENST00000439977 MPRIPQ6WCQ1 1025 aa16.5■□□□□ 0.23
HERPUD1-204ENST00000439977 HTATSF1O43719 755 aaKnown RBP16.5■□□□□ 0.23
HERPUD1-204ENST00000439977 THEMISQ8N1K5 641 aaPredicted RBP16.5■□□□□ 0.23
HERPUD1-204ENST00000439977 ANP32BQ92688 251 aaKnown RBP16.5■□□□□ 0.23
HERPUD1-204ENST00000439977 SRCIN1Q9C0H9 1055 aa16.5■□□□□ 0.23
HERPUD1-204ENST00000439977 SYCE3A1L190 88 aa16.49■□□□□ 0.23
HERPUD1-204ENST00000439977 MCCP23508 829 aa16.49■□□□□ 0.23
HERPUD1-204ENST00000439977 LMOD2Q6P5Q4 547 aa16.49■□□□□ 0.23
HERPUD1-204ENST00000439977 TMEM63CQ9P1W3 806 aa16.49■□□□□ 0.23
HERPUD1-204ENST00000439977 RNF214Q8ND24 703 aa16.49■□□□□ 0.23
HERPUD1-204ENST00000439977 SOS1Q07889 1333 aaPredicted RBP16.48■□□□□ 0.23
HERPUD1-204ENST00000439977 RHPN1Q8TCX5 695 aa16.48■□□□□ 0.23
HERPUD1-204ENST00000439977 TOPAZ1Q8N9V7 1692 aa16.47■□□□□ 0.23
HERPUD1-204ENST00000439977 RGPD8O14715 1765 aaPredicted RBP16.47■□□□□ 0.23
HERPUD1-204ENST00000439977 SSH3Q8TE77 659 aa16.47■□□□□ 0.23
HERPUD1-204ENST00000439977 SPG7Q9UQ90 795 aa16.47■□□□□ 0.23
HERPUD1-204ENST00000439977 OS9Q13438 667 aaPredicted RBP16.47■□□□□ 0.23
HERPUD1-204ENST00000439977 CWC27Q6UX04 472 aaKnown RBP16.47■□□□□ 0.23
HERPUD1-204ENST00000439977 STAP2Q9UGK3 403 aa16.47■□□□□ 0.23
HERPUD1-204ENST00000439977 DIP2AQ14689 1571 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms