RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 KIF20BQ96Q89 1820 aa6.17□□□□□ -1.42
EDEM3-203ENST00000439962 AMIGO3Q86WK7 504 aa6.17□□□□□ -1.42
EDEM3-203ENST00000439962 STK32BQ9NY57 414 aa6.17□□□□□ -1.42
EDEM3-203ENST00000439962 TNS2Q63HR2 1409 aa6.17□□□□□ -1.42
EDEM3-203ENST00000439962 MS4A1P11836 297 aa6.16□□□□□ -1.42
EDEM3-203ENST00000439962 RCAN3Q9UKA8 241 aa6.16□□□□□ -1.42
EDEM3-203ENST00000439962 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.16□□□□□ -1.42
EDEM3-203ENST00000439962 ZNF521Q96K83 1311 aa6.16□□□□□ -1.42
EDEM3-203ENST00000439962 GNPATO15228 680 aa6.16□□□□□ -1.42
EDEM3-203ENST00000439962 IGSF1Q8N6C5 1336 aa6.16□□□□□ -1.42
EDEM3-203ENST00000439962 RTL1A6NKG5 1358 aa6.16□□□□□ -1.42
EDEM3-203ENST00000439962 KCNQ3O43525 872 aa6.16□□□□□ -1.42
EDEM3-203ENST00000439962 NEFMP07197 916 aa6.16□□□□□ -1.42
EDEM3-203ENST00000439962 TEFQ10587 303 aa6.16□□□□□ -1.42
EDEM3-203ENST00000439962 AAMPQ13685 434 aa6.16□□□□□ -1.42
EDEM3-203ENST00000439962 WDR43Q15061 677 aaKnown RBP eCLIP6.16□□□□□ -1.42
EDEM3-203ENST00000439962 DISP2A7MBM2 1401 aa6.15□□□□□ -1.42
EDEM3-203ENST00000439962 LRRC37A3O60309 1634 aa6.15□□□□□ -1.42
EDEM3-203ENST00000439962 PALLDQ8WX93 1383 aa6.15□□□□□ -1.42
EDEM3-203ENST00000439962 FAM177BA6PVY3 158 aa6.15□□□□□ -1.42
EDEM3-203ENST00000439962 SLC15A2Q16348 729 aa6.15□□□□□ -1.42
EDEM3-203ENST00000439962 BICDL1Q6ZP65 573 aa6.15□□□□□ -1.42
EDEM3-203ENST00000439962 CCDC24Q8N4L8 307 aa6.15□□□□□ -1.42
EDEM3-203ENST00000439962 RTF1Q92541 710 aaKnown RBP6.15□□□□□ -1.42
EDEM3-203ENST00000439962 AK7Q96M32 723 aa6.15□□□□□ -1.42
EDEM3-203ENST00000439962 LOC102724428A0A0B4J2F2 783 aa6.15□□□□□ -1.43
EDEM3-203ENST00000439962 PRAMEF22A3QJZ6 481 aa6.15□□□□□ -1.43
EDEM3-203ENST00000439962 TCERG1O14776 1098 aaKnown RBP6.15□□□□□ -1.43
EDEM3-203ENST00000439962 CANXP27824 592 aaKnown RBP6.15□□□□□ -1.43
EDEM3-203ENST00000439962 SIK1P57059 783 aa6.15□□□□□ -1.43
EDEM3-203ENST00000439962 ATG3Q9NT62 314 aa6.15□□□□□ -1.43
EDEM3-203ENST00000439962 VIRMAQ69YN4 1812 aaKnown RBP6.14□□□□□ -1.43
EDEM3-203ENST00000439962 THSD7AQ9UPZ6 1657 aa6.14□□□□□ -1.43
EDEM3-203ENST00000439962 ELL2O00472 640 aaPredicted RBP6.14□□□□□ -1.43
EDEM3-203ENST00000439962 ITPK1Q13572 414 aa6.14□□□□□ -1.43
EDEM3-203ENST00000439962 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.14□□□□□ -1.43
EDEM3-203ENST00000439962 CCDC136Q96JN2 1154 aa6.14□□□□□ -1.43
EDEM3-203ENST00000439962 MAPK8IP3Q9UPT6 1336 aa6.14□□□□□ -1.43
EDEM3-203ENST00000439962 PLSCR1O15162 318 aa6.14□□□□□ -1.43
EDEM3-203ENST00000439962 TRMT2AQ8IZ69 625 aaKnown RBP6.14□□□□□ -1.43
EDEM3-203ENST00000439962 TTC5Q8N0Z6 440 aa6.14□□□□□ -1.43
EDEM3-203ENST00000439962 ADAMTS8Q9UP79 889 aa6.14□□□□□ -1.43
EDEM3-203ENST00000439962 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.13□□□□□ -1.43
EDEM3-203ENST00000439962 LINC00116Q8NCU8 138 aa6.13□□□□□ -1.43
EDEM3-203ENST00000439962 DCAF5Q96JK2 942 aa6.13□□□□□ -1.43
EDEM3-203ENST00000439962 SLC4A9Q96Q91 983 aa6.13□□□□□ -1.43
EDEM3-203ENST00000439962 GNAT3A8MTJ3 354 aa6.13□□□□□ -1.43
EDEM3-203ENST00000439962 AMOTQ4VCS5 1084 aa6.13□□□□□ -1.43
EDEM3-203ENST00000439962 DNAJC10Q8IXB1 793 aa6.13□□□□□ -1.43
EDEM3-203ENST00000439962 IL17REQ8NFR9 667 aa6.13□□□□□ -1.43
EDEM3-203ENST00000439962 NPHP1O15259 732 aa6.12□□□□□ -1.43
EDEM3-203ENST00000439962 RNMTO43148 476 aaKnown RBP6.12□□□□□ -1.43
EDEM3-203ENST00000439962 EIF2S2P20042 333 aaKnown RBP6.12□□□□□ -1.43
EDEM3-203ENST00000439962 RIPK4P57078 832 aa6.12□□□□□ -1.43
EDEM3-203ENST00000439962 COL23A1Q86Y22 540 aaPredicted RBP6.12□□□□□ -1.43
EDEM3-203ENST00000439962 RSPH6AQ9H0K4 717 aa6.12□□□□□ -1.43
EDEM3-203ENST00000439962 SPON1Q9HCB6 807 aa6.12□□□□□ -1.43
EDEM3-203ENST00000439962 SRP68Q9UHB9 627 aaKnown RBP6.12□□□□□ -1.43
EDEM3-203ENST00000439962 BTBD11A6QL63 1104 aa6.12□□□□□ -1.43
EDEM3-203ENST00000439962 ANXA1P04083 346 aa6.12□□□□□ -1.43
EDEM3-203ENST00000439962 KRT24Q2M2I5 525 aa6.12□□□□□ -1.43
EDEM3-203ENST00000439962 AKAP4Q5JQC9 854 aa6.12□□□□□ -1.43
EDEM3-203ENST00000439962 CCDC27Q2M243 656 aa6.12□□□□□ -1.43
EDEM3-203ENST00000439962 NPM2Q86SE8 214 aaKnown RBP6.12□□□□□ -1.43
EDEM3-203ENST00000439962 ZNF496Q96IT1 587 aaPredicted RBP6.12□□□□□ -1.43
EDEM3-203ENST00000439962 FHDC1Q9C0D6 1143 aaPredicted RBP6.12□□□□□ -1.43
EDEM3-203ENST00000439962 SLC52A2Q9HAB3 445 aa6.12□□□□□ -1.43
EDEM3-203ENST00000439962 TBC1D2BQ9UPU7 963 aa6.12□□□□□ -1.43
EDEM3-203ENST00000439962 APAF1O14727 1248 aa6.11□□□□□ -1.43
EDEM3-203ENST00000439962 A1BGP04217 495 aa6.11□□□□□ -1.43
EDEM3-203ENST00000439962 MYL6BP14649 208 aa6.11□□□□□ -1.43
EDEM3-203ENST00000439962 GOLGA2Q08379 1002 aa6.11□□□□□ -1.43
EDEM3-203ENST00000439962 KDM6AO15550 1401 aaPredicted RBP6.11□□□□□ -1.43
EDEM3-203ENST00000439962 B4GALNT3Q6L9W6 998 aa6.11□□□□□ -1.43
EDEM3-203ENST00000439962 PNPLA7Q6ZV29 1317 aa6.11□□□□□ -1.43
EDEM3-203ENST00000439962 ZNF219Q9P2Y4 722 aaPredicted RBP6.11□□□□□ -1.43
EDEM3-203ENST00000439962 PARP4Q9UKK3 1724 aaKnown RBP6.11□□□□□ -1.43
EDEM3-203ENST00000439962 E9PSI1 815 aa6.1□□□□□ -1.43
EDEM3-203ENST00000439962 HSP90AB1P08238 724 aaKnown RBP6.1□□□□□ -1.43
EDEM3-203ENST00000439962 RFC4P35249 363 aa6.1□□□□□ -1.43
EDEM3-203ENST00000439962 CRKLP46109 303 aaKnown RBP6.1□□□□□ -1.43
EDEM3-203ENST00000439962 GAS2L2Q8NHY3 880 aa6.1□□□□□ -1.43
EDEM3-203ENST00000439962 DOT1LQ8TEK3 1739 aa6.1□□□□□ -1.43
EDEM3-203ENST00000439962 FAM208AQ9UK61 1670 aaKnown RBP6.1□□□□□ -1.43
EDEM3-203ENST00000439962 CT47B1P0C2W7 299 aaPredicted RBP6.1□□□□□ -1.43
EDEM3-203ENST00000439962 SLFN5Q08AF3 891 aa6.1□□□□□ -1.43
EDEM3-203ENST00000439962 AIMP1Q12904 312 aaKnown RBP6.1□□□□□ -1.43
EDEM3-203ENST00000439962 ZBTB1Q9Y2K1 713 aa6.1□□□□□ -1.43
EDEM3-203ENST00000439962 RTCBQ9Y3I0 505 aaKnown RBP6.1□□□□□ -1.43
EDEM3-203ENST00000439962 USP16Q9Y5T5 823 aa6.1□□□□□ -1.43
EDEM3-203ENST00000439962 BTAF1O14981 1849 aa6.1□□□□□ -1.43
EDEM3-203ENST00000439962 KIF24Q5T7B8 1368 aa6.09□□□□□ -1.43
EDEM3-203ENST00000439962 IRX6P78412 446 aaPredicted RBP6.09□□□□□ -1.43
EDEM3-203ENST00000439962 GPR162Q16538 588 aa6.09□□□□□ -1.43
EDEM3-203ENST00000439962 RTL5Q5HYW3 569 aaPredicted RBP6.09□□□□□ -1.43
EDEM3-203ENST00000439962 DUSP27Q5VZP5 1158 aa6.09□□□□□ -1.43
EDEM3-203ENST00000439962 NLGN2Q8NFZ4 835 aa6.09□□□□□ -1.43
EDEM3-203ENST00000439962 SMARCC1Q92922 1105 aaPredicted RBP6.09□□□□□ -1.43
EDEM3-203ENST00000439962 SBF2Q86WG5 1849 aa6.09□□□□□ -1.43
EDEM3-203ENST00000439962 BCL9O00512 1426 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms