RNA–Protein interactions for RNA: ENST00000439669.5

CPNE1-217, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 784 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-217ENST00000439669 NFATC2IPQ8NCF5 419 aa32.14■■■□□ 2.74
CPNE1-217ENST00000439669 C4BP0C0L5 1744 aa32.13■■■□□ 2.73
CPNE1-217ENST00000439669 ATP6V1AP38606 617 aa32.13■■■□□ 2.73
CPNE1-217ENST00000439669 RSPH6AQ9H0K4 717 aa32.13■■■□□ 2.73
CPNE1-217ENST00000439669 RNMTO43148 476 aaKnown RBP32.12■■■□□ 2.73
CPNE1-217ENST00000439669 GAS2L2Q8NHY3 880 aa32.12■■■□□ 2.73
CPNE1-217ENST00000439669 AK7Q96M32 723 aa32.12■■■□□ 2.73
CPNE1-217ENST00000439669 RBM42Q9BTD8 480 aaKnown RBP32.12■■■□□ 2.73
CPNE1-217ENST00000439669 LGR6Q9HBX8 967 aa32.12■■■□□ 2.73
CPNE1-217ENST00000439669 MSH5O43196 834 aa32.11■■■□□ 2.73
CPNE1-217ENST00000439669 RALBP1Q15311 655 aa32.11■■■□□ 2.73
CPNE1-217ENST00000439669 PTGER2P43116 358 aa32.1■■■□□ 2.73
CPNE1-217ENST00000439669 ITPK1Q13572 414 aa32.1■■■□□ 2.73
CPNE1-217ENST00000439669 LINC00116Q8NCU8 138 aa32.1■■■□□ 2.73
CPNE1-217ENST00000439669 SLC16A10Q8TF71 515 aa32.09■■■□□ 2.73
CPNE1-217ENST00000439669 SLC52A2Q9HAB3 445 aa32.09■■■□□ 2.73
CPNE1-217ENST00000439669 MAP3K5Q99683 1374 aa32.08■■■□□ 2.73
CPNE1-217ENST00000439669 MRC1P22897 1456 aa32.08■■■□□ 2.73
CPNE1-217ENST00000439669 COL23A1Q86Y22 540 aaPredicted RBP32.07■■■□□ 2.72
CPNE1-217ENST00000439669 VIRMAQ69YN4 1812 aaKnown RBP32.06■■■□□ 2.72
CPNE1-217ENST00000439669 PHACTR3Q96KR7 559 aa32.06■■■□□ 2.72
CPNE1-217ENST00000439669 GNAT3A8MTJ3 354 aa32.05■■■□□ 2.72
CPNE1-217ENST00000439669 PTCD1O75127 700 aaKnown RBP32.05■■■□□ 2.72
CPNE1-217ENST00000439669 FCHSD2O94868 740 aa32.05■■■□□ 2.72
CPNE1-217ENST00000439669 ADAMTS7Q9UKP4 1686 aa32.05■■■□□ 2.72
CPNE1-217ENST00000439669 FLAD1Q8NFF5 587 aa32.04■■■□□ 2.72
CPNE1-217ENST00000439669 SLC4A9Q96Q91 983 aa32.04■■■□□ 2.72
CPNE1-217ENST00000439669 PHF14O94880 888 aa32.03■■■□□ 2.72
CPNE1-217ENST00000439669 SGIP1Q9BQI5 828 aa32.03■■■□□ 2.72
CPNE1-217ENST00000439669 ZNF831Q5JPB2 1677 aa32.02■■■□□ 2.72
CPNE1-217ENST00000439669 GNPATO15228 680 aa32.01■■■□□ 2.71
CPNE1-217ENST00000439669 UBR3Q6ZT12 1888 aa32■■■□□ 2.71
CPNE1-217ENST00000439669 AMIGO3Q86WK7 504 aa32■■■□□ 2.71
CPNE1-217ENST00000439669 MYBBP1AQ9BQG0 1328 aaKnown RBP32■■■□□ 2.71
CPNE1-217ENST00000439669 POLD1P28340 1107 aa31.99■■■□□ 2.71
CPNE1-217ENST00000439669 SMIM5Q71RC9 77 aa31.99■■■□□ 2.71
CPNE1-217ENST00000439669 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP31.98■■■□□ 2.71
CPNE1-217ENST00000439669 TEFQ10587 303 aa31.98■■■□□ 2.71
CPNE1-217ENST00000439669 SLC39A6Q13433 755 aa31.98■■■□□ 2.71
CPNE1-217ENST00000439669 IL17REQ8NFR9 667 aa31.98■■■□□ 2.71
CPNE1-217ENST00000439669 ARXQ96QS3 562 aa31.98■■■□□ 2.71
CPNE1-217ENST00000439669 NEFMP07197 916 aa31.97■■■□□ 2.71
CPNE1-217ENST00000439669 SSFA2P28290 1259 aa31.97■■■□□ 2.71
CPNE1-217ENST00000439669 MSL1Q68DK7 614 aa31.97■■■□□ 2.71
CPNE1-217ENST00000439669 COL5A3P25940 1745 aaPredicted RBP31.95■■■□□ 2.71
CPNE1-217ENST00000439669 CNTNAP4Q9C0A0 1308 aa31.94■■■□□ 2.7
CPNE1-217ENST00000439669 COL24A1Q17RW2 1714 aa31.93■■■□□ 2.7
CPNE1-217ENST00000439669 RTF1Q92541 710 aaKnown RBP31.93■■■□□ 2.7
CPNE1-217ENST00000439669 FHDC1Q9C0D6 1143 aaPredicted RBP31.93■■■□□ 2.7
CPNE1-217ENST00000439669 RC3H1Q5TC82 1133 aaKnown RBP31.92■■■□□ 2.7
CPNE1-217ENST00000439669 RTCBQ9Y3I0 505 aaKnown RBP31.92■■■□□ 2.7
CPNE1-217ENST00000439669 TJP1Q07157 1748 aa31.92■■■□□ 2.7
CPNE1-217ENST00000439669 TTC5Q8N0Z6 440 aa31.91■■■□□ 2.7
CPNE1-217ENST00000439669 KCPQ6ZWJ8 1503 aa31.9■■■□□ 2.7
CPNE1-217ENST00000439669 KLHL34Q8N239 644 aa31.9■■■□□ 2.7
CPNE1-217ENST00000439669 CEMIPQ8WUJ3 1361 aa31.9■■■□□ 2.7
CPNE1-217ENST00000439669 CICQ96RK0 1608 aaPredicted RBP31.89■■■□□ 2.7
CPNE1-217ENST00000439669 CRKLP46109 303 aaKnown RBP31.88■■■□□ 2.69
CPNE1-217ENST00000439669 DNAJC10Q8IXB1 793 aa31.88■■■□□ 2.69
CPNE1-217ENST00000439669 PNNQ9H307 717 aaKnown RBP31.88■■■□□ 2.69
CPNE1-217ENST00000439669 PRKRIP1Q9H875 184 aaPredicted RBP31.88■■■□□ 2.69
CPNE1-217ENST00000439669 SIPA1L3O60292 1781 aaPredicted RBP31.87■■■□□ 2.69
CPNE1-217ENST00000439669 MAPK8IP3Q9UPT6 1336 aa31.87■■■□□ 2.69
CPNE1-217ENST00000439669 ZNF316A6NFI3 1004 aaPredicted RBP31.87■■■□□ 2.69
CPNE1-217ENST00000439669 MCM10Q7L590 875 aa31.87■■■□□ 2.69
CPNE1-217ENST00000439669 SYT17Q9BSW7 474 aa31.87■■■□□ 2.69
CPNE1-217ENST00000439669 RPS6KA4O75676 772 aa31.86■■■□□ 2.69
CPNE1-217ENST00000439669 TRAPPC3LQ5T215 181 aa31.86■■■□□ 2.69
CPNE1-217ENST00000439669 PLEKHF1Q96S99 279 aa31.86■■■□□ 2.69
CPNE1-217ENST00000439669 UBR2Q8IWV8 1755 aa31.85■■■□□ 2.69
CPNE1-217ENST00000439669 MYH14Q7Z406 1995 aaKnown RBP31.85■■■□□ 2.69
CPNE1-217ENST00000439669 ADRA2BP18089 450 aa31.84■■■□□ 2.69
CPNE1-217ENST00000439669 DCTN1Q14203 1278 aa31.84■■■□□ 2.69
CPNE1-217ENST00000439669 HTATSF1O43719 755 aaKnown RBP31.83■■■□□ 2.69
CPNE1-217ENST00000439669 ZNF790Q6PG37 636 aa31.83■■■□□ 2.69
CPNE1-217ENST00000439669 BTBD11A6QL63 1104 aa31.82■■■□□ 2.68
CPNE1-217ENST00000439669 DCAF8L1A6NGE4 600 aa31.81■■■□□ 2.68
CPNE1-217ENST00000439669 VSIG10Q8N0Z9 540 aa31.81■■■□□ 2.68
CPNE1-217ENST00000439669 ARHGEF1Q92888 912 aaKnown RBP31.81■■■□□ 2.68
CPNE1-217ENST00000439669 CCDC87Q9NVE4 849 aa31.81■■■□□ 2.68
CPNE1-217ENST00000439669 NFE2L2Q16236 605 aa31.8■■■□□ 2.68
CPNE1-217ENST00000439669 INTS5Q6P9B9 1019 aaKnown RBP31.8■■■□□ 2.68
CPNE1-217ENST00000439669 ZNF496Q96IT1 587 aaPredicted RBP31.8■■■□□ 2.68
CPNE1-217ENST00000439669 CYP19A1P11511 503 aaPredicted RBP31.79■■■□□ 2.68
CPNE1-217ENST00000439669 RFC4P35249 363 aa31.79■■■□□ 2.68
CPNE1-217ENST00000439669 WDR43Q15061 677 aaKnown RBP eCLIP31.79■■■□□ 2.68
CPNE1-217ENST00000439669 HEG1Q9ULI3 1381 aa31.78■■■□□ 2.68
CPNE1-217ENST00000439669 DLG5Q8TDM6 1919 aa31.77■■■□□ 2.68
CPNE1-217ENST00000439669 FMNL2Q96PY5 1086 aa31.77■■■□□ 2.68
CPNE1-217ENST00000439669 KCNQ3O43525 872 aa31.76■■■□□ 2.67
CPNE1-217ENST00000439669 C4AP0C0L4 1744 aa31.75■■■□□ 2.67
CPNE1-217ENST00000439669 STARD3NLO95772 234 aa31.73■■■□□ 2.67
CPNE1-217ENST00000439669 ZBTB1Q9Y2K1 713 aa31.73■■■□□ 2.67
CPNE1-217ENST00000439669 SOS1Q07889 1333 aaPredicted RBP31.73■■■□□ 2.67
CPNE1-217ENST00000439669 GYS1P13807 737 aa31.71■■■□□ 2.67
CPNE1-217ENST00000439669 TAF7Q15545 349 aaPredicted RBP31.71■■■□□ 2.67
CPNE1-217ENST00000439669 CCDC146Q8IYE0 955 aa31.71■■■□□ 2.67
CPNE1-217ENST00000439669 NLGN1Q8N2Q7 840 aa31.71■■■□□ 2.67
CPNE1-217ENST00000439669 TEX13AQ9BXU3 409 aaPredicted RBP31.71■■■□□ 2.67
CPNE1-217ENST00000439669 SRP68Q9UHB9 627 aaKnown RBP31.71■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms