RNA–Protein interactions for RNA: ENST00000439613.2

HMGB1P37-201, Transcript of high mobility group box 1 pseudogene 37, humanhuman

BASIC

Gene HMGB1P37, Length 609 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P37-201ENST00000439613 PLEKHG3A1L390 1219 aa5.29□□□□□ -1.56
HMGB1P37-201ENST00000439613 KCNA6P17658 529 aa5.29□□□□□ -1.56
HMGB1P37-201ENST00000439613 WDR43Q15061 677 aaKnown RBP eCLIP5.29□□□□□ -1.56
HMGB1P37-201ENST00000439613 LAPTM4BQ86VI4 370 aa5.29□□□□□ -1.56
HMGB1P37-201ENST00000439613 CFAP53Q96M91 514 aa5.29□□□□□ -1.56
HMGB1P37-201ENST00000439613 SEPT9Q9UHD8 586 aaPredicted RBP5.29□□□□□ -1.56
HMGB1P37-201ENST00000439613 KIF20BQ96Q89 1820 aa5.29□□□□□ -1.56
HMGB1P37-201ENST00000439613 EDC4Q6P2E9 1401 aaKnown RBP5.29□□□□□ -1.56
HMGB1P37-201ENST00000439613 PPIP5K1Q6PFW1 1433 aa5.29□□□□□ -1.56
HMGB1P37-201ENST00000439613 AKAP12Q02952 1782 aa5.29□□□□□ -1.56
HMGB1P37-201ENST00000439613 CDC42BPGQ6DT37 1551 aa5.29□□□□□ -1.56
HMGB1P37-201ENST00000439613 ZBED9Q6R2W3 1325 aa5.28□□□□□ -1.56
HMGB1P37-201ENST00000439613 CD163L1Q9NR16 1453 aa5.28□□□□□ -1.56
HMGB1P37-201ENST00000439613 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.28□□□□□ -1.56
HMGB1P37-201ENST00000439613 RCCD1A6NED2 376 aa5.28□□□□□ -1.56
HMGB1P37-201ENST00000439613 MDM2Q00987 491 aaPredicted RBP5.28□□□□□ -1.56
HMGB1P37-201ENST00000439613 TTLL12Q14166 644 aaPredicted RBP5.28□□□□□ -1.56
HMGB1P37-201ENST00000439613 FAM98CQ17RN3 349 aaKnown RBP5.28□□□□□ -1.56
HMGB1P37-201ENST00000439613 PARP9Q8IXQ6 854 aa5.28□□□□□ -1.56
HMGB1P37-201ENST00000439613 REPIN1Q9BWE0 567 aaKnown RBP5.28□□□□□ -1.56
HMGB1P37-201ENST00000439613 CPSF1Q10570 1443 aaKnown RBP5.28□□□□□ -1.56
HMGB1P37-201ENST00000439613 ANKARQ7Z5J8 1434 aa5.28□□□□□ -1.56
HMGB1P37-201ENST00000439613 MON2Q7Z3U7 1717 aa5.28□□□□□ -1.56
HMGB1P37-201ENST00000439613 POLR3AO14802 1390 aaPredicted RBP5.28□□□□□ -1.56
HMGB1P37-201ENST00000439613 TOPAZ1Q8N9V7 1692 aa5.28□□□□□ -1.56
HMGB1P37-201ENST00000439613 GOLGA8CPA6NN73 597 aa5.27□□□□□ -1.57
HMGB1P37-201ENST00000439613 FYB1O15117 783 aa5.27□□□□□ -1.57
HMGB1P37-201ENST00000439613 DNAJB2P25686 324 aa5.27□□□□□ -1.57
HMGB1P37-201ENST00000439613 NWD1Q149M9 1564 aa5.27□□□□□ -1.57
HMGB1P37-201ENST00000439613 NGEFQ8N5V2 710 aa5.27□□□□□ -1.57
HMGB1P37-201ENST00000439613 FMN2Q9NZ56 1722 aa5.27□□□□□ -1.57
HMGB1P37-201ENST00000439613 NKTRP30414 1462 aaKnown RBP5.26□□□□□ -1.57
HMGB1P37-201ENST00000439613 PRR36Q9H6K5 1346 aa5.26□□□□□ -1.57
HMGB1P37-201ENST00000439613 ADGRL3Q9HAR2 1447 aa5.26□□□□□ -1.57
HMGB1P37-201ENST00000439613 PDE3BQ13370 1112 aa5.26□□□□□ -1.57
HMGB1P37-201ENST00000439613 AMHR2Q16671 573 aa5.26□□□□□ -1.57
HMGB1P37-201ENST00000439613 C14orf37Q86TY3 774 aa5.26□□□□□ -1.57
HMGB1P37-201ENST00000439613 PROSER2Q86WR7 435 aaPredicted RBP5.26□□□□□ -1.57
HMGB1P37-201ENST00000439613 ZFRQ96KR1 1074 aaKnown RBP5.26□□□□□ -1.57
HMGB1P37-201ENST00000439613 KDM4CQ9H3R0 1056 aa5.26□□□□□ -1.57
HMGB1P37-201ENST00000439613 RGPD8O14715 1765 aaPredicted RBP5.26□□□□□ -1.57
HMGB1P37-201ENST00000439613 ACEP12821 1306 aa5.25□□□□□ -1.57
HMGB1P37-201ENST00000439613 TTC21AQ8NDW8 1320 aa5.25□□□□□ -1.57
HMGB1P37-201ENST00000439613 MAP2P11137 1827 aaKnown RBP5.25□□□□□ -1.57
HMGB1P37-201ENST00000439613 BLMP54132 1417 aaPredicted RBP5.25□□□□□ -1.57
HMGB1P37-201ENST00000439613 NCOA3Q9Y6Q9 1424 aa5.25□□□□□ -1.57
HMGB1P37-201ENST00000439613 TNNT2P45379 298 aaPredicted RBP5.25□□□□□ -1.57
HMGB1P37-201ENST00000439613 MTHFSP49914 203 aa5.25□□□□□ -1.57
HMGB1P37-201ENST00000439613 GIGYF2Q6Y7W6 1299 aaKnown RBP5.25□□□□□ -1.57
HMGB1P37-201ENST00000439613 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.25□□□□□ -1.57
HMGB1P37-201ENST00000439613 NGDNQ8NEJ9 315 aaKnown RBP5.25□□□□□ -1.57
HMGB1P37-201ENST00000439613 COG3Q96JB2 828 aa5.25□□□□□ -1.57
HMGB1P37-201ENST00000439613 PNNQ9H307 717 aaKnown RBP5.25□□□□□ -1.57
HMGB1P37-201ENST00000439613 GGNBP2Q9H3C7 697 aa5.25□□□□□ -1.57
HMGB1P37-201ENST00000439613 TMEM134Q9H6X4 195 aa5.25□□□□□ -1.57
HMGB1P37-201ENST00000439613 DAXXQ9UER7 740 aaPredicted RBP5.25□□□□□ -1.57
HMGB1P37-201ENST00000439613 ADAMTS8Q9UP79 889 aa5.25□□□□□ -1.57
HMGB1P37-201ENST00000439613 NUDCQ9Y266 331 aa5.25□□□□□ -1.57
HMGB1P37-201ENST00000439613 NALCNQ8IZF0 1738 aa5.25□□□□□ -1.57
HMGB1P37-201ENST00000439613 TTC21BQ7Z4L5 1316 aa5.24□□□□□ -1.57
HMGB1P37-201ENST00000439613 CLCN1P35523 988 aa5.24□□□□□ -1.57
HMGB1P37-201ENST00000439613 SWT1Q5T5J6 900 aaKnown RBP5.24□□□□□ -1.57
HMGB1P37-201ENST00000439613 SAMD7Q7Z3H4 446 aa5.24□□□□□ -1.57
HMGB1P37-201ENST00000439613 TMUB1Q9BVT8 246 aa5.24□□□□□ -1.57
HMGB1P37-201ENST00000439613 C19orf44Q9H6X5 657 aa5.24□□□□□ -1.57
HMGB1P37-201ENST00000439613 GPCPD1Q9NPB8 672 aa5.24□□□□□ -1.57
HMGB1P37-201ENST00000439613 GTF3C3Q9Y5Q9 886 aa5.24□□□□□ -1.57
HMGB1P37-201ENST00000439613 AATKQ6ZMQ8 1374 aa5.24□□□□□ -1.57
HMGB1P37-201ENST00000439613 LMTK3Q96Q04 1460 aa5.24□□□□□ -1.57
HMGB1P37-201ENST00000439613 USP6P35125 1406 aa5.23□□□□□ -1.57
HMGB1P37-201ENST00000439613 NEFLP07196 543 aa5.23□□□□□ -1.57
HMGB1P37-201ENST00000439613 MS4A1P11836 297 aa5.23□□□□□ -1.57
HMGB1P37-201ENST00000439613 ATF3P18847 181 aa5.23□□□□□ -1.57
HMGB1P37-201ENST00000439613 HSPA2P54652 639 aa5.23□□□□□ -1.57
HMGB1P37-201ENST00000439613 NME9Q86XW9 330 aa5.23□□□□□ -1.57
HMGB1P37-201ENST00000439613 SPNS2Q8IVW8 549 aa5.23□□□□□ -1.57
HMGB1P37-201ENST00000439613 IL27Q8NEV9 243 aa5.23□□□□□ -1.57
HMGB1P37-201ENST00000439613 ANKK1Q8NFD2 765 aa5.23□□□□□ -1.57
HMGB1P37-201ENST00000439613 WNT2BQ93097 391 aa5.23□□□□□ -1.57
HMGB1P37-201ENST00000439613 FAM117AQ9C073 453 aa5.23□□□□□ -1.57
HMGB1P37-201ENST00000439613 PNPLA6Q8IY17 1366 aa5.23□□□□□ -1.57
HMGB1P37-201ENST00000439613 NRKQ7Z2Y5 1582 aa5.23□□□□□ -1.57
HMGB1P37-201ENST00000439613 STRCQ7RTU9 1775 aa5.23□□□□□ -1.57
HMGB1P37-201ENST00000439613 DCCP43146 1447 aa5.23□□□□□ -1.57
HMGB1P37-201ENST00000439613 SSH2Q76I76 1423 aa5.23□□□□□ -1.57
HMGB1P37-201ENST00000439613 SMG6Q86US8 1419 aaKnown RBP5.23□□□□□ -1.57
HMGB1P37-201ENST00000439613 SHPRHQ149N8 1683 aa5.22□□□□□ -1.57
HMGB1P37-201ENST00000439613 USP31Q70CQ4 1352 aa5.22□□□□□ -1.57
HMGB1P37-201ENST00000439613 DIAPH1O60610 1272 aaKnown RBP5.22□□□□□ -1.57
HMGB1P37-201ENST00000439613 RNF40O75150 1001 aa5.22□□□□□ -1.57
HMGB1P37-201ENST00000439613 SSTR3P32745 418 aaPredicted RBP5.22□□□□□ -1.57
HMGB1P37-201ENST00000439613 SLC4A3P48751 1232 aa5.22□□□□□ -1.57
HMGB1P37-201ENST00000439613 PSME1Q06323 249 aa5.22□□□□□ -1.57
HMGB1P37-201ENST00000439613 PMFBP1Q8TBY8 1022 aa5.22□□□□□ -1.57
HMGB1P37-201ENST00000439613 RUNDC1Q96C34 613 aa5.22□□□□□ -1.57
HMGB1P37-201ENST00000439613 LRCH3Q96II8 777 aa5.22□□□□□ -1.57
HMGB1P37-201ENST00000439613 PLSCR2Q9NRY7 297 aa5.22□□□□□ -1.57
HMGB1P37-201ENST00000439613 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.22□□□□□ -1.57
HMGB1P37-201ENST00000439613 KIF1AQ12756 1690 aa5.21□□□□□ -1.57
HMGB1P37-201ENST00000439613 USP54Q70EL1 1684 aa5.21□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms