RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 XPCQ01831 940 aaPredicted RBP23.01■■□□□ 1.27
CLK1-205ENST00000434813 TAF7Q15545 349 aaPredicted RBP23.01■■□□□ 1.27
CLK1-205ENST00000434813 IP6K1Q92551 441 aa23.01■■□□□ 1.27
CLK1-205ENST00000434813 LTV1Q96GA3 475 aaPredicted RBP23.01■■□□□ 1.27
CLK1-205ENST00000434813 STRCP1A6NGW2 1772 aa23.01■■□□□ 1.27
CLK1-205ENST00000434813 GNAI2P04899 355 aa23.01■■□□□ 1.27
CLK1-205ENST00000434813 CADPS2Q86UW7 1296 aa23.01■■□□□ 1.27
CLK1-205ENST00000434813 CIZ1Q9ULV3 898 aaPredicted RBP23.01■■□□□ 1.27
CLK1-205ENST00000434813 KIF1AQ12756 1690 aa23.01■■□□□ 1.27
CLK1-205ENST00000434813 CEMIPQ8WUJ3 1361 aa23■■□□□ 1.27
CLK1-205ENST00000434813 HSP90AB1P08238 724 aaKnown RBP23■■□□□ 1.27
CLK1-205ENST00000434813 SMARCA5O60264 1052 aaPredicted RBP22.99■■□□□ 1.27
CLK1-205ENST00000434813 FKBP5Q13451 457 aaPredicted RBP22.99■■□□□ 1.27
CLK1-205ENST00000434813 LMOD2Q6P5Q4 547 aa22.99■■□□□ 1.27
CLK1-205ENST00000434813 KRT28Q7Z3Y7 464 aa22.99■■□□□ 1.27
CLK1-205ENST00000434813 K7ELQ4 463 aaPredicted RBP22.98■■□□□ 1.27
CLK1-205ENST00000434813 GNAI3P08754 354 aa22.98■■□□□ 1.27
CLK1-205ENST00000434813 MST1RQ04912 1400 aa22.98■■□□□ 1.27
CLK1-205ENST00000434813 KDM3BQ7LBC6 1761 aa22.98■■□□□ 1.27
CLK1-205ENST00000434813 SDSP20132 328 aa22.98■■□□□ 1.27
CLK1-205ENST00000434813 OSBPL3Q9H4L5 887 aa22.98■■□□□ 1.27
CLK1-205ENST00000434813 LMO7Q8WWI1 1683 aa22.97■■□□□ 1.27
CLK1-205ENST00000434813 CD2BP2O95400 341 aaKnown RBP22.97■■□□□ 1.27
CLK1-205ENST00000434813 USHBP1Q8N6Y0 703 aa22.97■■□□□ 1.27
CLK1-205ENST00000434813 IL27Q8NEV9 243 aa22.97■■□□□ 1.27
CLK1-205ENST00000434813 CASC1Q6TDU7 716 aa22.96■■□□□ 1.27
CLK1-205ENST00000434813 APBB1O00213 710 aa22.96■■□□□ 1.27
CLK1-205ENST00000434813 TUBGCP6Q96RT7 1819 aa22.95■■□□□ 1.26
CLK1-205ENST00000434813 SLIT3O75094 1523 aa22.95■■□□□ 1.26
CLK1-205ENST00000434813 RABEP1Q15276 862 aa22.94■■□□□ 1.26
CLK1-205ENST00000434813 BRPF3Q9ULD4 1205 aa22.94■■□□□ 1.26
CLK1-205ENST00000434813 DDX11L8A8MPP1 907 aa22.94■■□□□ 1.26
CLK1-205ENST00000434813 USP26Q9BXU7 913 aa22.94■■□□□ 1.26
CLK1-205ENST00000434813 NBPF6Q5VWK0 638 aa22.93■■□□□ 1.26
CLK1-205ENST00000434813 NBPF4Q96M43 638 aa22.93■■□□□ 1.26
CLK1-205ENST00000434813 RBM42Q9BTD8 480 aaKnown RBP22.93■■□□□ 1.26
CLK1-205ENST00000434813 NCAPD2Q15021 1401 aa22.93■■□□□ 1.26
CLK1-205ENST00000434813 RGPD2P0DJD1 1756 aa22.93■■□□□ 1.26
CLK1-205ENST00000434813 ZBTB7CA1YPR0 619 aa22.92■■□□□ 1.26
CLK1-205ENST00000434813 GCP02774 474 aa22.92■■□□□ 1.26
CLK1-205ENST00000434813 SALL3Q9BXA9 1300 aa22.92■■□□□ 1.26
CLK1-205ENST00000434813 PDE1AP54750 535 aa22.92■■□□□ 1.26
CLK1-205ENST00000434813 HDGFL1Q5TGJ6 251 aa22.92■■□□□ 1.26
CLK1-205ENST00000434813 NECTIN2Q92692 538 aa22.92■■□□□ 1.26
CLK1-205ENST00000434813 RAB3GAP1Q15042 981 aa22.91■■□□□ 1.26
CLK1-205ENST00000434813 PLEKHG5O94827 1062 aa22.91■■□□□ 1.26
CLK1-205ENST00000434813 HOXB7P09629 217 aa22.91■■□□□ 1.26
CLK1-205ENST00000434813 ATP8B2P98198 1209 aa22.91■■□□□ 1.26
CLK1-205ENST00000434813 CAMTA1Q9Y6Y1 1673 aa22.9■■□□□ 1.26
CLK1-205ENST00000434813 IBTKQ9P2D0 1353 aaPredicted RBP22.9■■□□□ 1.26
CLK1-205ENST00000434813 TRPM3Q9HCF6 1732 aaPredicted RBP22.9■■□□□ 1.26
CLK1-205ENST00000434813 NPHP3Q7Z494 1330 aa22.9■■□□□ 1.26
CLK1-205ENST00000434813 HSP90AA1P07900 732 aaKnown RBP22.89■■□□□ 1.26
CLK1-205ENST00000434813 LRRCC1Q9C099 1032 aa22.89■■□□□ 1.26
CLK1-205ENST00000434813 EXOC6BQ9Y2D4 811 aa22.89■■□□□ 1.26
CLK1-205ENST00000434813 REC8O95072 547 aa22.89■■□□□ 1.25
CLK1-205ENST00000434813 TNPO1Q92973 898 aaKnown RBP22.89■■□□□ 1.25
CLK1-205ENST00000434813 PNMA6EA0A0J9YXQ4 647 aa22.88■■□□□ 1.25
CLK1-205ENST00000434813 L1TD1Q5T7N2 865 aaKnown RBP22.88■■□□□ 1.25
CLK1-205ENST00000434813 OVOS2A0A0G2JMS6 1433 aa22.88■■□□□ 1.25
CLK1-205ENST00000434813 TRAK2O60296 914 aa22.87■■□□□ 1.25
CLK1-205ENST00000434813 EIF4A1P60842 406 aaKnown RBP22.87■■□□□ 1.25
CLK1-205ENST00000434813 CHMP4AQ9BY43 222 aa22.87■■□□□ 1.25
CLK1-205ENST00000434813 LRRFIP2Q9Y608 721 aaKnown RBP22.87■■□□□ 1.25
CLK1-205ENST00000434813 LTBP4Q8N2S1 1624 aa22.86■■□□□ 1.25
CLK1-205ENST00000434813 ERC2O15083 957 aa22.86■■□□□ 1.25
CLK1-205ENST00000434813 AKAP4Q5JQC9 854 aa22.86■■□□□ 1.25
CLK1-205ENST00000434813 GBP4Q96PP9 640 aa22.86■■□□□ 1.25
CLK1-205ENST00000434813 USP44Q9H0E7 712 aa22.86■■□□□ 1.25
CLK1-205ENST00000434813 UBTFL1P0CB47 393 aaPredicted RBP22.86■■□□□ 1.25
CLK1-205ENST00000434813 ARHGEF25Q86VW2 580 aa22.86■■□□□ 1.25
CLK1-205ENST00000434813 PHAXQ9H814 394 aaKnown RBP22.85■■□□□ 1.25
CLK1-205ENST00000434813 MX1P20591 662 aa22.84■■□□□ 1.25
CLK1-205ENST00000434813 DDX17Q92841 729 aaKnown RBP22.84■■□□□ 1.25
CLK1-205ENST00000434813 LGR6Q9HBX8 967 aa22.84■■□□□ 1.25
CLK1-205ENST00000434813 PXDNQ92626 1479 aa22.84■■□□□ 1.25
CLK1-205ENST00000434813 PLEKHO1Q53GL0 409 aaPredicted RBP22.84■■□□□ 1.25
CLK1-205ENST00000434813 AMOTQ4VCS5 1084 aa22.83■■□□□ 1.25
CLK1-205ENST00000434813 ZNF530Q6P9A1 599 aaPredicted RBP22.83■■□□□ 1.25
CLK1-205ENST00000434813 LRRC59Q96AG4 307 aaKnown RBP22.83■■□□□ 1.25
CLK1-205ENST00000434813 FSD2A1L4K1 749 aa22.82■■□□□ 1.24
CLK1-205ENST00000434813 SRCIN1Q9C0H9 1055 aa22.82■■□□□ 1.24
CLK1-205ENST00000434813 STAP2Q9UGK3 403 aa22.82■■□□□ 1.24
CLK1-205ENST00000434813 PTMSP20962 102 aa22.82■■□□□ 1.24
CLK1-205ENST00000434813 SSH3Q8TE77 659 aa22.82■■□□□ 1.24
CLK1-205ENST00000434813 FOXD4L1Q9NU39 408 aa22.82■■□□□ 1.24
CLK1-205ENST00000434813 AOX1Q06278 1338 aa22.82■■□□□ 1.24
CLK1-205ENST00000434813 ALS2Q96Q42 1657 aa22.81■■□□□ 1.24
CLK1-205ENST00000434813 TEFQ10587 303 aa22.81■■□□□ 1.24
CLK1-205ENST00000434813 XIRP1Q702N8 1843 aaKnown RBP22.81■■□□□ 1.24
CLK1-205ENST00000434813 CHPF2Q9P2E5 772 aa22.8■■□□□ 1.24
CLK1-205ENST00000434813 ADAMTS7Q9UKP4 1686 aa22.79■■□□□ 1.24
CLK1-205ENST00000434813 TNS3Q68CZ2 1445 aa22.79■■□□□ 1.24
CLK1-205ENST00000434813 GOLGA6L3A6NEY3 463 aa22.79■■□□□ 1.24
CLK1-205ENST00000434813 ST18O60284 1047 aa22.79■■□□□ 1.24
CLK1-205ENST00000434813 EIF2S2P20042 333 aaKnown RBP22.79■■□□□ 1.24
CLK1-205ENST00000434813 POLA2Q14181 598 aa22.79■■□□□ 1.24
CLK1-205ENST00000434813 CLEC17AQ6ZS10 378 aa22.79■■□□□ 1.24
CLK1-205ENST00000434813 CERKQ8TCT0 537 aa22.79■■□□□ 1.24
CLK1-205ENST00000434813 SIPA1L3O60292 1781 aaPredicted RBP22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms