RNA–Protein interactions for RNA: ENST00000434755.5

NOD1-206, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 2

Gene NOD1, Length 4,610 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-206ENST00000434755 ERC2O15083 957 aa12.94□□□□□ -0.34
NOD1-206ENST00000434755 VPS37DQ86XT2 251 aa12.94□□□□□ -0.34
NOD1-206ENST00000434755 MED14O60244 1454 aa12.94□□□□□ -0.34
NOD1-206ENST00000434755 HDAC1Q13547 482 aaPredicted RBP12.93□□□□□ -0.34
NOD1-206ENST00000434755 LARP1Q6PKG0 1096 aaKnown RBP12.93□□□□□ -0.34
NOD1-206ENST00000434755 EYA1Q99502 592 aa12.93□□□□□ -0.34
NOD1-206ENST00000434755 MROH2AA6NES4 1674 aa12.93□□□□□ -0.34
NOD1-206ENST00000434755 TMEM131LA2VDJ0 1609 aa12.93□□□□□ -0.34
NOD1-206ENST00000434755 CHRNA2Q15822 529 aa12.93□□□□□ -0.34
NOD1-206ENST00000434755 DCAF5Q96JK2 942 aa12.93□□□□□ -0.34
NOD1-206ENST00000434755 ZNF652Q9Y2D9 606 aa12.93□□□□□ -0.34
NOD1-206ENST00000434755 PCDH11XQ9BZA7 1347 aa12.93□□□□□ -0.34
NOD1-206ENST00000434755 PCDH11YQ9BZA8 1340 aa12.93□□□□□ -0.34
NOD1-206ENST00000434755 RSPH6AQ9H0K4 717 aa12.93□□□□□ -0.34
NOD1-206ENST00000434755 ADAMTS13Q76LX8 1427 aa12.92□□□□□ -0.34
NOD1-206ENST00000434755 SKOR2Q2VWA4 1001 aaPredicted RBP12.92□□□□□ -0.34
NOD1-206ENST00000434755 ZRANB1Q9UGI0 708 aa12.92□□□□□ -0.34
NOD1-206ENST00000434755 QRICH2Q9H0J4 1663 aa12.92□□□□□ -0.34
NOD1-206ENST00000434755 IQGAP1P46940 1657 aa12.92□□□□□ -0.34
NOD1-206ENST00000434755 CHD1LQ86WJ1 897 aa12.92□□□□□ -0.34
NOD1-206ENST00000434755 TMEM57Q8N5G2 664 aa12.92□□□□□ -0.34
NOD1-206ENST00000434755 CHMP5Q9NZZ3 219 aa12.92□□□□□ -0.34
NOD1-206ENST00000434755 SLIT1O75093 1534 aa12.92□□□□□ -0.34
NOD1-206ENST00000434755 HOXB7P09629 217 aa12.91□□□□□ -0.34
NOD1-206ENST00000434755 SNRPA1P09661 255 aaKnown RBP12.91□□□□□ -0.34
NOD1-206ENST00000434755 CSPP1Q1MSJ5 1256 aa12.91□□□□□ -0.34
NOD1-206ENST00000434755 FBXW7Q969H0 707 aa12.91□□□□□ -0.34
NOD1-206ENST00000434755 CDC42BPGQ6DT37 1551 aa12.91□□□□□ -0.34
NOD1-206ENST00000434755 RAD21O60216 631 aa12.9□□□□□ -0.34
NOD1-206ENST00000434755 C20orf194Q5TEA3 1177 aa12.9□□□□□ -0.34
NOD1-206ENST00000434755 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.9□□□□□ -0.34
NOD1-206ENST00000434755 PRR36Q9H6K5 1346 aa12.9□□□□□ -0.34
NOD1-206ENST00000434755 TRIM27P14373 513 aa12.9□□□□□ -0.34
NOD1-206ENST00000434755 MPRIPQ6WCQ1 1025 aa12.9□□□□□ -0.34
NOD1-206ENST00000434755 TRMT2AQ8IZ69 625 aaKnown RBP12.9□□□□□ -0.34
NOD1-206ENST00000434755 A0A087WZG4 1122 aa12.9□□□□□ -0.34
NOD1-206ENST00000434755 SYAP1Q96A49 352 aaPredicted RBP12.9□□□□□ -0.34
NOD1-206ENST00000434755 ZNF521Q96K83 1311 aa12.89□□□□□ -0.35
NOD1-206ENST00000434755 CDK12Q9NYV4 1490 aaPredicted RBP12.89□□□□□ -0.35
NOD1-206ENST00000434755 MCM2P49736 904 aa12.89□□□□□ -0.35
NOD1-206ENST00000434755 DDB1Q16531 1140 aa12.89□□□□□ -0.35
NOD1-206ENST00000434755 PPLO60437 1756 aa12.89□□□□□ -0.35
NOD1-206ENST00000434755 DEKP35659 375 aaKnown RBP12.89□□□□□ -0.35
NOD1-206ENST00000434755 CLASRPQ8N2M8 674 aaKnown RBP12.89□□□□□ -0.35
NOD1-206ENST00000434755 CCDC85AQ96PX6 553 aaPredicted RBP12.89□□□□□ -0.35
NOD1-206ENST00000434755 SIL1Q9H173 461 aa12.89□□□□□ -0.35
NOD1-206ENST00000434755 ARHGAP23Q9P227 1491 aa12.89□□□□□ -0.35
NOD1-206ENST00000434755 USP31Q70CQ4 1352 aa12.89□□□□□ -0.35
NOD1-206ENST00000434755 MYO3AQ8NEV4 1616 aa12.88□□□□□ -0.35
NOD1-206ENST00000434755 HIP1O00291 1037 aa12.88□□□□□ -0.35
NOD1-206ENST00000434755 KIF3AQ9Y496 699 aa12.88□□□□□ -0.35
NOD1-206ENST00000434755 DCCP43146 1447 aa12.88□□□□□ -0.35
NOD1-206ENST00000434755 MBIPQ9NS73 344 aa12.88□□□□□ -0.35
NOD1-206ENST00000434755 CLSTN1O94985 981 aa12.87□□□□□ -0.35
NOD1-206ENST00000434755 MTHFSDQ2M296 383 aaKnown RBP12.87□□□□□ -0.35
NOD1-206ENST00000434755 DRC7Q8IY82 874 aa12.87□□□□□ -0.35
NOD1-206ENST00000434755 ZKSCAN1P17029 563 aaPredicted RBP12.87□□□□□ -0.35
NOD1-206ENST00000434755 RABEP1Q15276 862 aa12.87□□□□□ -0.35
NOD1-206ENST00000434755 WASHC4Q2M389 1173 aa12.87□□□□□ -0.35
NOD1-206ENST00000434755 ARHGEF25Q86VW2 580 aa12.87□□□□□ -0.35
NOD1-206ENST00000434755 KIF13AQ9H1H9 1805 aa12.87□□□□□ -0.35
NOD1-206ENST00000434755 ZNF335Q9H4Z2 1342 aaPredicted RBP12.86□□□□□ -0.35
NOD1-206ENST00000434755 NUCB2P80303 420 aa12.86□□□□□ -0.35
NOD1-206ENST00000434755 RAB11FIP3O75154 756 aa12.86□□□□□ -0.35
NOD1-206ENST00000434755 ATP6V1DQ9Y5K8 247 aa12.86□□□□□ -0.35
NOD1-206ENST00000434755 SKAP1Q86WV1 359 aa12.86□□□□□ -0.35
NOD1-206ENST00000434755 CABLES1Q8TDN4 633 aa12.86□□□□□ -0.35
NOD1-206ENST00000434755 ADGRB1O14514 1584 aa12.86□□□□□ -0.35
NOD1-206ENST00000434755 AEBP1Q8IUX7 1158 aa12.85□□□□□ -0.35
NOD1-206ENST00000434755 PPP1R1BQ9UD71 204 aaPredicted RBP12.85□□□□□ -0.35
NOD1-206ENST00000434755 LRRCC1Q9C099 1032 aa12.85□□□□□ -0.35
NOD1-206ENST00000434755 BTG4Q9NY30 223 aa12.85□□□□□ -0.35
NOD1-206ENST00000434755 RNF20Q5VTR2 975 aa12.85□□□□□ -0.35
NOD1-206ENST00000434755 FAM83GA6ND36 823 aa12.85□□□□□ -0.35
NOD1-206ENST00000434755 SF3A1Q15459 793 aaKnown RBP12.85□□□□□ -0.35
NOD1-206ENST00000434755 RASSF8Q8NHQ8 419 aa12.85□□□□□ -0.35
NOD1-206ENST00000434755 DNAAF4Q8WXU2 420 aa12.85□□□□□ -0.35
NOD1-206ENST00000434755 MCTP1Q6DN14 999 aa12.84□□□□□ -0.35
NOD1-206ENST00000434755 CNTROBQ8N137 903 aa12.84□□□□□ -0.35
NOD1-206ENST00000434755 FAM184AQ8NB25 1140 aa12.84□□□□□ -0.35
NOD1-206ENST00000434755 RNMTO43148 476 aaKnown RBP12.84□□□□□ -0.35
NOD1-206ENST00000434755 SPATA31A3Q5VYP0 1347 aa12.84□□□□□ -0.35
NOD1-206ENST00000434755 MRPL50Q8N5N7 158 aaKnown RBP12.84□□□□□ -0.35
NOD1-206ENST00000434755 C8orf37Q96NL8 207 aa12.84□□□□□ -0.35
NOD1-206ENST00000434755 FLIIQ13045 1269 aa12.84□□□□□ -0.35
NOD1-206ENST00000434755 NOL10Q9BSC4 688 aaKnown RBP12.84□□□□□ -0.35
NOD1-206ENST00000434755 CIZ1Q9ULV3 898 aaPredicted RBP12.84□□□□□ -0.35
NOD1-206ENST00000434755 IL1RAPL2Q9NP60 686 aa12.83□□□□□ -0.36
NOD1-206ENST00000434755 SAMD1Q6SPF0 538 aaPredicted RBP12.83□□□□□ -0.36
NOD1-206ENST00000434755 DNAJC2Q99543 621 aaKnown RBP12.83□□□□□ -0.36
NOD1-206ENST00000434755 CPSF1Q10570 1443 aaKnown RBP12.83□□□□□ -0.36
NOD1-206ENST00000434755 H3BQV1 296 aa12.83□□□□□ -0.36
NOD1-206ENST00000434755 IFFO2Q5TF58 517 aa12.83□□□□□ -0.36
NOD1-206ENST00000434755 BICDL1Q6ZP65 573 aa12.83□□□□□ -0.36
NOD1-206ENST00000434755 KIAA0232Q92628 1395 aa12.82□□□□□ -0.36
NOD1-206ENST00000434755 F6X3S4 739 aa12.82□□□□□ -0.36
NOD1-206ENST00000434755 BMP2KLQ5H9B9 411 aa12.82□□□□□ -0.36
NOD1-206ENST00000434755 CREBRFQ8IUR6 639 aa12.82□□□□□ -0.36
NOD1-206ENST00000434755 IGSF1Q8N6C5 1336 aa12.82□□□□□ -0.36
NOD1-206ENST00000434755 VAMP4O75379 141 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms