RNA–Protein interactions for RNA: ENST00000431736.6

UBE4A-202, Transcript of ubiquitination factor E4A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UBE4A, Length 6,061 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-202ENST00000431736 NSD2O96028 1365 aa5.91□□□□□ -1.46
UBE4A-202ENST00000431736 ONECUT3O60422 494 aaPredicted RBP5.91□□□□□ -1.46
UBE4A-202ENST00000431736 CHD2O14647 1828 aaKnown RBP5.9□□□□□ -1.46
UBE4A-202ENST00000431736 RBM17Q96I25 401 aaKnown RBP5.9□□□□□ -1.46
UBE4A-202ENST00000431736 USP19O94966 1318 aa5.9□□□□□ -1.46
UBE4A-202ENST00000431736 SLIT2O94813 1529 aa5.9□□□□□ -1.46
UBE4A-202ENST00000431736 AKAP4Q5JQC9 854 aa5.9□□□□□ -1.46
UBE4A-202ENST00000431736 VPS37DQ86XT2 251 aa5.9□□□□□ -1.46
UBE4A-202ENST00000431736 TNS4Q8IZW8 715 aa5.9□□□□□ -1.46
UBE4A-202ENST00000431736 LARGE2Q8N3Y3 721 aa5.9□□□□□ -1.46
UBE4A-202ENST00000431736 EYA3Q99504 573 aa5.9□□□□□ -1.46
UBE4A-202ENST00000431736 C1QTNF8P60827 252 aa5.9□□□□□ -1.47
UBE4A-202ENST00000431736 ERFEQ4G0M1 354 aa5.9□□□□□ -1.47
UBE4A-202ENST00000431736 CCAR1Q8IX12 1150 aaKnown RBP5.9□□□□□ -1.47
UBE4A-202ENST00000431736 ZNF408Q9H9D4 720 aa5.9□□□□□ -1.47
UBE4A-202ENST00000431736 EMILIN1Q9Y6C2 1016 aa5.9□□□□□ -1.47
UBE4A-202ENST00000431736 HSP90AB2PQ58FF8 381 aa5.9□□□□□ -1.47
UBE4A-202ENST00000431736 TSPYL4Q9UJ04 414 aa5.9□□□□□ -1.47
UBE4A-202ENST00000431736 HDAC9Q9UKV0 1011 aa5.9□□□□□ -1.47
UBE4A-202ENST00000431736 BCL9LQ86UU0 1499 aa5.9□□□□□ -1.47
UBE4A-202ENST00000431736 TRIM34Q9BYJ4 488 aa5.9□□□□□ -1.47
UBE4A-202ENST00000431736 TAOK3Q9H2K8 898 aa5.9□□□□□ -1.47
UBE4A-202ENST00000431736 ANO8Q9HCE9 1232 aaPredicted RBP5.9□□□□□ -1.47
UBE4A-202ENST00000431736 TMOD2Q9NZR1 351 aa5.9□□□□□ -1.47
UBE4A-202ENST00000431736 H7C1D1 291 aa5.89□□□□□ -1.47
UBE4A-202ENST00000431736 VEGFAP15692 232 aaPredicted RBP5.89□□□□□ -1.47
UBE4A-202ENST00000431736 CCDC93Q567U6 631 aa5.89□□□□□ -1.47
UBE4A-202ENST00000431736 CC2D2BQ6DHV5 1058 aa5.89□□□□□ -1.47
UBE4A-202ENST00000431736 NOL10Q9BSC4 688 aaKnown RBP5.89□□□□□ -1.47
UBE4A-202ENST00000431736 GRIPAP1Q4V328 841 aa5.89□□□□□ -1.47
UBE4A-202ENST00000431736 NLRP3Q96P20 1036 aa5.89□□□□□ -1.47
UBE4A-202ENST00000431736 RIC3Q7Z5B4 369 aa5.89□□□□□ -1.47
UBE4A-202ENST00000431736 PXDNQ92626 1479 aa5.89□□□□□ -1.47
UBE4A-202ENST00000431736 COL14A1Q05707 1796 aaKnown RBP5.89□□□□□ -1.47
UBE4A-202ENST00000431736 KIF24Q5T7B8 1368 aa5.89□□□□□ -1.47
UBE4A-202ENST00000431736 RPS6KA4O75676 772 aa5.88□□□□□ -1.47
UBE4A-202ENST00000431736 TCIRG1Q13488 830 aa5.88□□□□□ -1.47
UBE4A-202ENST00000431736 C9orf131Q5VYM1 1079 aa5.88□□□□□ -1.47
UBE4A-202ENST00000431736 DZIP3Q86Y13 1208 aaKnown RBP5.88□□□□□ -1.47
UBE4A-202ENST00000431736 C6orf229H3BNL8 230 aa5.88□□□□□ -1.47
UBE4A-202ENST00000431736 USP32Q8NFA0 1604 aa5.88□□□□□ -1.47
UBE4A-202ENST00000431736 PLEKHG2Q9H7P9 1386 aa5.88□□□□□ -1.47
UBE4A-202ENST00000431736 MYO1BO43795 1136 aa5.88□□□□□ -1.47
UBE4A-202ENST00000431736 NIP7Q9Y221 180 aaKnown RBP eCLIP5.88□□□□□ -1.47
UBE4A-202ENST00000431736 MAP3K5Q99683 1374 aa5.88□□□□□ -1.47
UBE4A-202ENST00000431736 SNRPA1P09661 255 aaKnown RBP5.88□□□□□ -1.47
UBE4A-202ENST00000431736 RTKN2Q8IZC4 609 aa5.88□□□□□ -1.47
UBE4A-202ENST00000431736 ZNF316A6NFI3 1004 aaPredicted RBP5.87□□□□□ -1.47
UBE4A-202ENST00000431736 OGFOD1Q8N543 542 aa5.87□□□□□ -1.47
UBE4A-202ENST00000431736 ZNF784Q8NCA9 323 aaPredicted RBP5.87□□□□□ -1.47
UBE4A-202ENST00000431736 A0A1W2PP64 1363 aa5.87□□□□□ -1.47
UBE4A-202ENST00000431736 LMNB1P20700 586 aa5.87□□□□□ -1.47
UBE4A-202ENST00000431736 AIMP1Q12904 312 aaKnown RBP5.87□□□□□ -1.47
UBE4A-202ENST00000431736 TNS2Q63HR2 1409 aa5.87□□□□□ -1.47
UBE4A-202ENST00000431736 SERPINB2P05120 415 aa5.87□□□□□ -1.47
UBE4A-202ENST00000431736 INSRP06213 1382 aa5.87□□□□□ -1.47
UBE4A-202ENST00000431736 RBM5P52756 815 aaKnown RBP eCLIP5.87□□□□□ -1.47
UBE4A-202ENST00000431736 KCNQ4P56696 695 aa5.87□□□□□ -1.47
UBE4A-202ENST00000431736 TNIP1Q15025 636 aa5.87□□□□□ -1.47
UBE4A-202ENST00000431736 ANKIB1Q9P2G1 1089 aa5.87□□□□□ -1.47
UBE4A-202ENST00000431736 TOMM70O94826 608 aa5.86□□□□□ -1.47
UBE4A-202ENST00000431736 PNMA8AQ86V59 439 aaPredicted RBP5.86□□□□□ -1.47
UBE4A-202ENST00000431736 FYB1O15117 783 aa5.86□□□□□ -1.47
UBE4A-202ENST00000431736 OTUD7BQ6GQQ9 843 aa5.86□□□□□ -1.47
UBE4A-202ENST00000431736 NFATC2IPQ8NCF5 419 aa5.86□□□□□ -1.47
UBE4A-202ENST00000431736 PHKG2P15735 406 aa5.86□□□□□ -1.47
UBE4A-202ENST00000431736 DCPSQ96C86 337 aaKnown RBP5.86□□□□□ -1.47
UBE4A-202ENST00000431736 PRKAR2BP31323 418 aa5.86□□□□□ -1.47
UBE4A-202ENST00000431736 CRKLP46109 303 aaKnown RBP5.86□□□□□ -1.47
UBE4A-202ENST00000431736 GORABQ5T7V8 394 aa5.86□□□□□ -1.47
UBE4A-202ENST00000431736 RC3H1Q5TC82 1133 aaKnown RBP5.86□□□□□ -1.47
UBE4A-202ENST00000431736 COL23A1Q86Y22 540 aaPredicted RBP5.86□□□□□ -1.47
UBE4A-202ENST00000431736 ITSN1Q15811 1721 aa5.85□□□□□ -1.47
UBE4A-202ENST00000431736 HSPA6P17066 643 aa5.85□□□□□ -1.47
UBE4A-202ENST00000431736 OS9Q13438 667 aaPredicted RBP5.85□□□□□ -1.47
UBE4A-202ENST00000431736 EYA1Q99502 592 aa5.85□□□□□ -1.47
UBE4A-202ENST00000431736 PPIP5K2O43314 1243 aa5.85□□□□□ -1.47
UBE4A-202ENST00000431736 IGHMBP2P38935 993 aaKnown RBP5.85□□□□□ -1.47
UBE4A-202ENST00000431736 RALBP1Q15311 655 aa5.85□□□□□ -1.47
UBE4A-202ENST00000431736 HACL1Q9UJ83 578 aa5.85□□□□□ -1.47
UBE4A-202ENST00000431736 MYL6BP14649 208 aa5.85□□□□□ -1.47
UBE4A-202ENST00000431736 KIF22Q14807 665 aa5.85□□□□□ -1.47
UBE4A-202ENST00000431736 USPL1Q5W0Q7 1092 aa5.85□□□□□ -1.47
UBE4A-202ENST00000431736 TRMT112Q9UI30 125 aaKnown RBP5.85□□□□□ -1.47
UBE4A-202ENST00000431736 TBC1D2BQ9UPU7 963 aa5.85□□□□□ -1.47
UBE4A-202ENST00000431736 COL5A2P05997 1499 aaPredicted RBP5.85□□□□□ -1.47
UBE4A-202ENST00000431736 XRN1Q8IZH2 1706 aaKnown RBP5.85□□□□□ -1.47
UBE4A-202ENST00000431736 A0A0G2JLW4 131 aa5.85□□□□□ -1.47
UBE4A-202ENST00000431736 FSTL1Q12841 308 aa5.85□□□□□ -1.47
UBE4A-202ENST00000431736 SULF1Q8IWU6 871 aa5.85□□□□□ -1.47
UBE4A-202ENST00000431736 BCL11AQ9H165 835 aa5.85□□□□□ -1.47
UBE4A-202ENST00000431736 RRAGCQ9HB90 399 aa5.85□□□□□ -1.47
UBE4A-202ENST00000431736 PARP10Q53GL7 1025 aa5.85□□□□□ -1.47
UBE4A-202ENST00000431736 C2orf69Q8N8R5 385 aa5.85□□□□□ -1.47
UBE4A-202ENST00000431736 MPHOSPH8Q99549 860 aa5.85□□□□□ -1.47
UBE4A-202ENST00000431736 MYH16Q9H6N6 1097 aa5.85□□□□□ -1.47
UBE4A-202ENST00000431736 DPEP1P16444 411 aa5.84□□□□□ -1.47
UBE4A-202ENST00000431736 MASTLQ96GX5 879 aa5.84□□□□□ -1.47
UBE4A-202ENST00000431736 ZC3H12CQ9C0D7 883 aaKnown RBP5.84□□□□□ -1.47
UBE4A-202ENST00000431736 AXIN2Q9Y2T1 843 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms