RNA–Protein interactions for RNA: ENST00000429147.1

SLC6A8-203, Transcript of solute carrier family 6 member 8, humanhuman

TSL 2

Gene SLC6A8, Length 334 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A8-203ENST00000429147 NUDCQ9Y266 331 aa22.42■■□□□ 1.18
SLC6A8-203ENST00000429147 PRKAR2BP31323 418 aa22.41■■□□□ 1.18
SLC6A8-203ENST00000429147 ITPK1Q13572 414 aa22.41■■□□□ 1.18
SLC6A8-203ENST00000429147 PTGER2P43116 358 aa22.4■■□□□ 1.18
SLC6A8-203ENST00000429147 SMIM5Q71RC9 77 aa22.4■■□□□ 1.18
SLC6A8-203ENST00000429147 LINC00116Q8NCU8 138 aa22.4■■□□□ 1.18
SLC6A8-203ENST00000429147 AMIGO3Q86WK7 504 aa22.39■■□□□ 1.17
SLC6A8-203ENST00000429147 QSER1Q2KHR3 1735 aa22.39■■□□□ 1.17
SLC6A8-203ENST00000429147 VIRMAQ69YN4 1812 aaKnown RBP22.38■■□□□ 1.17
SLC6A8-203ENST00000429147 ATP6V1AP38606 617 aa22.38■■□□□ 1.17
SLC6A8-203ENST00000429147 RALBP1Q15311 655 aa22.38■■□□□ 1.17
SLC6A8-203ENST00000429147 COL23A1Q86Y22 540 aaPredicted RBP22.38■■□□□ 1.17
SLC6A8-203ENST00000429147 RBM42Q9BTD8 480 aaKnown RBP22.38■■□□□ 1.17
SLC6A8-203ENST00000429147 SLC52A2Q9HAB3 445 aa22.38■■□□□ 1.17
SLC6A8-203ENST00000429147 SGIP1Q9BQI5 828 aa22.37■■□□□ 1.17
SLC6A8-203ENST00000429147 MTFR1LQ9H019 292 aa22.37■■□□□ 1.17
SLC6A8-203ENST00000429147 C4BP0C0L5 1744 aa22.37■■□□□ 1.17
SLC6A8-203ENST00000429147 ADAMTS7Q9UKP4 1686 aa22.36■■□□□ 1.17
SLC6A8-203ENST00000429147 FCHSD2O94868 740 aa22.36■■□□□ 1.17
SLC6A8-203ENST00000429147 IL17REQ8NFR9 667 aa22.36■■□□□ 1.17
SLC6A8-203ENST00000429147 PTCD1O75127 700 aaKnown RBP22.35■■□□□ 1.17
SLC6A8-203ENST00000429147 GAS2L2Q8NHY3 880 aa22.35■■□□□ 1.17
SLC6A8-203ENST00000429147 SLC39A6Q13433 755 aa22.34■■□□□ 1.17
SLC6A8-203ENST00000429147 MAP3K5Q99683 1374 aa22.34■■□□□ 1.17
SLC6A8-203ENST00000429147 GNAT3A8MTJ3 354 aa22.33■■□□□ 1.17
SLC6A8-203ENST00000429147 MRC1P22897 1456 aa22.33■■□□□ 1.16
SLC6A8-203ENST00000429147 MSH5O43196 834 aa22.32■■□□□ 1.16
SLC6A8-203ENST00000429147 SLC16A10Q8TF71 515 aa22.32■■□□□ 1.16
SLC6A8-203ENST00000429147 AK7Q96M32 723 aa22.32■■□□□ 1.16
SLC6A8-203ENST00000429147 PPP1R1BQ9UD71 204 aaPredicted RBP22.32■■□□□ 1.16
SLC6A8-203ENST00000429147 UBR3Q6ZT12 1888 aa22.31■■□□□ 1.16
SLC6A8-203ENST00000429147 PHF14O94880 888 aa22.3■■□□□ 1.16
SLC6A8-203ENST00000429147 MYBBP1AQ9BQG0 1328 aaKnown RBP22.3■■□□□ 1.16
SLC6A8-203ENST00000429147 ZNF831Q5JPB2 1677 aa22.3■■□□□ 1.16
SLC6A8-203ENST00000429147 PLEKHF1Q96S99 279 aa22.29■■□□□ 1.16
SLC6A8-203ENST00000429147 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.28■■□□□ 1.16
SLC6A8-203ENST00000429147 ZNF316A6NFI3 1004 aaPredicted RBP22.28■■□□□ 1.16
SLC6A8-203ENST00000429147 HMGB2P26583 209 aaKnown RBP22.28■■□□□ 1.16
SLC6A8-203ENST00000429147 PRKRIP1Q9H875 184 aaPredicted RBP22.28■■□□□ 1.16
SLC6A8-203ENST00000429147 COL24A1Q17RW2 1714 aa22.28■■□□□ 1.16
SLC6A8-203ENST00000429147 GNPATO15228 680 aa22.27■■□□□ 1.16
SLC6A8-203ENST00000429147 COL5A3P25940 1745 aaPredicted RBP22.27■■□□□ 1.16
SLC6A8-203ENST00000429147 MSL1Q68DK7 614 aa22.27■■□□□ 1.16
SLC6A8-203ENST00000429147 CEMIPQ8WUJ3 1361 aa22.26■■□□□ 1.15
SLC6A8-203ENST00000429147 DCTN1Q14203 1278 aa22.26■■□□□ 1.15
SLC6A8-203ENST00000429147 MCM10Q7L590 875 aa22.26■■□□□ 1.15
SLC6A8-203ENST00000429147 FLAD1Q8NFF5 587 aa22.26■■□□□ 1.15
SLC6A8-203ENST00000429147 MYH14Q7Z406 1995 aaKnown RBP22.26■■□□□ 1.15
SLC6A8-203ENST00000429147 RC3H1Q5TC82 1133 aaKnown RBP22.25■■□□□ 1.15
SLC6A8-203ENST00000429147 ARXQ96QS3 562 aa22.25■■□□□ 1.15
SLC6A8-203ENST00000429147 TJP1Q07157 1748 aa22.25■■□□□ 1.15
SLC6A8-203ENST00000429147 KCPQ6ZWJ8 1503 aa22.25■■□□□ 1.15
SLC6A8-203ENST00000429147 SIPA1L3O60292 1781 aaPredicted RBP22.25■■□□□ 1.15
SLC6A8-203ENST00000429147 SSFA2P28290 1259 aa22.24■■□□□ 1.15
SLC6A8-203ENST00000429147 TEFQ10587 303 aa22.24■■□□□ 1.15
SLC6A8-203ENST00000429147 DNAJC10Q8IXB1 793 aa22.24■■□□□ 1.15
SLC6A8-203ENST00000429147 FHDC1Q9C0D6 1143 aaPredicted RBP22.23■■□□□ 1.15
SLC6A8-203ENST00000429147 CNTNAP4Q9C0A0 1308 aa22.23■■□□□ 1.15
SLC6A8-203ENST00000429147 KCNQ3O43525 872 aa22.22■■□□□ 1.15
SLC6A8-203ENST00000429147 CRKLP46109 303 aaKnown RBP22.22■■□□□ 1.15
SLC6A8-203ENST00000429147 RPS6KA4O75676 772 aa22.21■■□□□ 1.15
SLC6A8-203ENST00000429147 INTS5Q6P9B9 1019 aaKnown RBP22.21■■□□□ 1.15
SLC6A8-203ENST00000429147 SYT17Q9BSW7 474 aa22.21■■□□□ 1.15
SLC6A8-203ENST00000429147 RTCBQ9Y3I0 505 aaKnown RBP22.21■■□□□ 1.15
SLC6A8-203ENST00000429147 CICQ96RK0 1608 aaPredicted RBP22.2■■□□□ 1.15
SLC6A8-203ENST00000429147 UBR2Q8IWV8 1755 aa22.2■■□□□ 1.14
SLC6A8-203ENST00000429147 DLG5Q8TDM6 1919 aa22.2■■□□□ 1.14
SLC6A8-203ENST00000429147 POLD1P28340 1107 aa22.2■■□□□ 1.14
SLC6A8-203ENST00000429147 ZNF790Q6PG37 636 aa22.2■■□□□ 1.14
SLC6A8-203ENST00000429147 RTF1Q92541 710 aaKnown RBP22.2■■□□□ 1.14
SLC6A8-203ENST00000429147 ARHGEF1Q92888 912 aaKnown RBP22.2■■□□□ 1.14
SLC6A8-203ENST00000429147 ZNF496Q96IT1 587 aaPredicted RBP22.2■■□□□ 1.14
SLC6A8-203ENST00000429147 HTATSF1O43719 755 aaKnown RBP22.19■■□□□ 1.14
SLC6A8-203ENST00000429147 CYP19A1P11511 503 aaPredicted RBP22.19■■□□□ 1.14
SLC6A8-203ENST00000429147 TRAPPC3LQ5T215 181 aa22.19■■□□□ 1.14
SLC6A8-203ENST00000429147 BTBD11A6QL63 1104 aa22.18■■□□□ 1.14
SLC6A8-203ENST00000429147 NFE2L2Q16236 605 aa22.18■■□□□ 1.14
SLC6A8-203ENST00000429147 TTC5Q8N0Z6 440 aa22.17■■□□□ 1.14
SLC6A8-203ENST00000429147 NEFMP07197 916 aa22.16■■□□□ 1.14
SLC6A8-203ENST00000429147 VSIG10Q8N0Z9 540 aa22.16■■□□□ 1.14
SLC6A8-203ENST00000429147 PNNQ9H307 717 aaKnown RBP22.16■■□□□ 1.14
SLC6A8-203ENST00000429147 CCDC184Q52MB2 194 aa22.15■■□□□ 1.14
SLC6A8-203ENST00000429147 CCDC146Q8IYE0 955 aa22.15■■□□□ 1.14
SLC6A8-203ENST00000429147 THUMPD2Q9BTF0 503 aaKnown RBP22.15■■□□□ 1.14
SLC6A8-203ENST00000429147 CCDC87Q9NVE4 849 aa22.15■■□□□ 1.14
SLC6A8-203ENST00000429147 ADAMTS8Q9UP79 889 aa22.15■■□□□ 1.14
SLC6A8-203ENST00000429147 MAPK8IP3Q9UPT6 1336 aa22.14■■□□□ 1.14
SLC6A8-203ENST00000429147 KLHL34Q8N239 644 aa22.14■■□□□ 1.13
SLC6A8-203ENST00000429147 MIS18AQ9NYP9 233 aa22.14■■□□□ 1.13
SLC6A8-203ENST00000429147 HEG1Q9ULI3 1381 aa22.13■■□□□ 1.13
SLC6A8-203ENST00000429147 ADRA2BP18089 450 aa22.13■■□□□ 1.13
SLC6A8-203ENST00000429147 C4AP0C0L4 1744 aa22.12■■□□□ 1.13
SLC6A8-203ENST00000429147 GYS1P13807 737 aa22.12■■□□□ 1.13
SLC6A8-203ENST00000429147 RFC4P35249 363 aa22.12■■□□□ 1.13
SLC6A8-203ENST00000429147 TAF7Q15545 349 aaPredicted RBP22.12■■□□□ 1.13
SLC6A8-203ENST00000429147 SRP68Q9UHB9 627 aaKnown RBP22.12■■□□□ 1.13
SLC6A8-203ENST00000429147 ZBTB1Q9Y2K1 713 aa22.12■■□□□ 1.13
SLC6A8-203ENST00000429147 PRAMEF22A3QJZ6 481 aa22.11■■□□□ 1.13
SLC6A8-203ENST00000429147 TMPOP42166 694 aaKnown RBP22.11■■□□□ 1.13
SLC6A8-203ENST00000429147 WDR43Q15061 677 aaKnown RBP eCLIP22.11■■□□□ 1.134e-28■□□□□ 8.5
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms