RNA–Protein interactions for RNA: ENST00000428331.6

ATP2C1-204, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP2C1, Length 4,795 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-204ENST00000428331 CHMLP26374 656 aa12.92□□□□□ -0.34
ATP2C1-204ENST00000428331 CUL4AQ13619 759 aa12.92□□□□□ -0.34
ATP2C1-204ENST00000428331 SMAP1Q8IYB5 467 aaPredicted RBP12.92□□□□□ -0.34
ATP2C1-204ENST00000428331 CNTROBQ8N137 903 aa12.92□□□□□ -0.34
ATP2C1-204ENST00000428331 CHMP4AQ9BY43 222 aa12.92□□□□□ -0.34
ATP2C1-204ENST00000428331 MIS18AQ9NYP9 233 aa12.92□□□□□ -0.34
ATP2C1-204ENST00000428331 SURF6O75683 361 aaKnown RBP12.92□□□□□ -0.34
ATP2C1-204ENST00000428331 UBE2HP62256 183 aa12.92□□□□□ -0.34
ATP2C1-204ENST00000428331 NECTIN2Q92692 538 aa12.92□□□□□ -0.34
ATP2C1-204ENST00000428331 POGZQ7Z3K3 1410 aa12.92□□□□□ -0.34
ATP2C1-204ENST00000428331 MROH1Q8NDA8 1641 aa12.92□□□□□ -0.34
ATP2C1-204ENST00000428331 HCLS1P14317 486 aaPredicted RBP12.92□□□□□ -0.34
ATP2C1-204ENST00000428331 TXNDC2Q86VQ3 553 aa12.92□□□□□ -0.34
ATP2C1-204ENST00000428331 NSFL1CQ9UNZ2 370 aaKnown RBP12.92□□□□□ -0.34
ATP2C1-204ENST00000428331 VPS37CA5D8V6 355 aaPredicted RBP12.92□□□□□ -0.34
ATP2C1-204ENST00000428331 AMPHP49418 695 aa12.92□□□□□ -0.34
ATP2C1-204ENST00000428331 AEBP1Q8IUX7 1158 aa12.92□□□□□ -0.34
ATP2C1-204ENST00000428331 MYRIPQ8NFW9 859 aa12.92□□□□□ -0.34
ATP2C1-204ENST00000428331 EDC4Q6P2E9 1401 aaKnown RBP12.92□□□□□ -0.34
ATP2C1-204ENST00000428331 KIAA0232Q92628 1395 aa12.91□□□□□ -0.34
ATP2C1-204ENST00000428331 MLH3Q9UHC1 1453 aa12.91□□□□□ -0.34
ATP2C1-204ENST00000428331 CCDC192P0DO97 292 aa12.91□□□□□ -0.34
ATP2C1-204ENST00000428331 PIBF1Q8WXW3 757 aa12.91□□□□□ -0.34
ATP2C1-204ENST00000428331 GPATCH3Q96I76 525 aa12.91□□□□□ -0.34
ATP2C1-204ENST00000428331 ZNF830Q96NB3 372 aaPredicted RBP12.91□□□□□ -0.34
ATP2C1-204ENST00000428331 CCDC94Q9BW85 323 aaPredicted RBP12.91□□□□□ -0.34
ATP2C1-204ENST00000428331 FBXO31Q5XUX0 539 aaPredicted RBP12.91□□□□□ -0.34
ATP2C1-204ENST00000428331 IL1RAPL2Q9NP60 686 aa12.91□□□□□ -0.34
ATP2C1-204ENST00000428331 ABCC3O15438 1527 aa12.91□□□□□ -0.34
ATP2C1-204ENST00000428331 ABCA9Q8IUA7 1624 aa12.91□□□□□ -0.34
ATP2C1-204ENST00000428331 ZKSCAN1P17029 563 aaPredicted RBP12.9□□□□□ -0.34
ATP2C1-204ENST00000428331 HSP90AB4PQ58FF6 505 aa12.9□□□□□ -0.34
ATP2C1-204ENST00000428331 TTC12Q9H892 705 aaPredicted RBP12.9□□□□□ -0.34
ATP2C1-204ENST00000428331 PPLO60437 1756 aa12.9□□□□□ -0.34
ATP2C1-204ENST00000428331 LIMCH1Q9UPQ0 1083 aa12.9□□□□□ -0.34
ATP2C1-204ENST00000428331 IFT172Q9UG01 1749 aa12.9□□□□□ -0.34
ATP2C1-204ENST00000428331 STX6O43752 255 aa12.9□□□□□ -0.34
ATP2C1-204ENST00000428331 ZSCAN22P10073 491 aaPredicted RBP12.9□□□□□ -0.34
ATP2C1-204ENST00000428331 EIF4A2Q14240 407 aaKnown RBP12.9□□□□□ -0.34
ATP2C1-204ENST00000428331 ATP8B2P98198 1209 aa12.89□□□□□ -0.35
ATP2C1-204ENST00000428331 AATKQ6ZMQ8 1374 aa12.89□□□□□ -0.35
ATP2C1-204ENST00000428331 NUTM2FA1L443 756 aa12.89□□□□□ -0.35
ATP2C1-204ENST00000428331 ZC3H13Q5T200 1668 aaKnown RBP12.89□□□□□ -0.35
ATP2C1-204ENST00000428331 CPSF1Q10570 1443 aaKnown RBP12.89□□□□□ -0.35
ATP2C1-204ENST00000428331 MLECQ14165 292 aa12.89□□□□□ -0.35
ATP2C1-204ENST00000428331 HTATSF1O43719 755 aaKnown RBP12.89□□□□□ -0.35
ATP2C1-204ENST00000428331 GADD45BO75293 160 aaPredicted RBP12.89□□□□□ -0.35
ATP2C1-204ENST00000428331 FLIIQ13045 1269 aa12.89□□□□□ -0.35
ATP2C1-204ENST00000428331 SPC24Q8NBT2 197 aa12.89□□□□□ -0.35
ATP2C1-204ENST00000428331 EPB41L2O43491 1005 aaKnown RBP12.88□□□□□ -0.35
ATP2C1-204ENST00000428331 RAB11FIP3O75154 756 aa12.88□□□□□ -0.35
ATP2C1-204ENST00000428331 PRDM10Q9NQV6 1147 aa12.88□□□□□ -0.35
ATP2C1-204ENST00000428331 PALD1Q9ULE6 856 aa12.88□□□□□ -0.35
ATP2C1-204ENST00000428331 CNPY2Q9Y2B0 182 aa12.88□□□□□ -0.35
ATP2C1-204ENST00000428331 ATP7BP35670 1465 aa12.88□□□□□ -0.35
ATP2C1-204ENST00000428331 ZSCAN31Q96LW9 406 aaPredicted RBP12.88□□□□□ -0.35
ATP2C1-204ENST00000428331 AK9Q5TCS8 1911 aa12.88□□□□□ -0.35
ATP2C1-204ENST00000428331 HDAC5Q9UQL6 1122 aa12.88□□□□□ -0.35
ATP2C1-204ENST00000428331 CHMP3Q9Y3E7 222 aa12.88□□□□□ -0.35
ATP2C1-204ENST00000428331 LRRFIP2Q9Y608 721 aaKnown RBP12.88□□□□□ -0.35
ATP2C1-204ENST00000428331 NUTM1Q86Y26 1132 aa12.88□□□□□ -0.35
ATP2C1-204ENST00000428331 PDCL2Q8N4E4 241 aa12.88□□□□□ -0.35
ATP2C1-204ENST00000428331 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.88□□□□□ -0.35
ATP2C1-204ENST00000428331 SSH2Q76I76 1423 aa12.87□□□□□ -0.35
ATP2C1-204ENST00000428331 KDM4AO75164 1064 aa12.87□□□□□ -0.35
ATP2C1-204ENST00000428331 MAP4K4O95819 1239 aaPredicted RBP12.87□□□□□ -0.35
ATP2C1-204ENST00000428331 G2E3Q7L622 706 aa12.87□□□□□ -0.35
ATP2C1-204ENST00000428331 CDK12Q9NYV4 1490 aaPredicted RBP12.87□□□□□ -0.35
ATP2C1-204ENST00000428331 KIDINS220Q9ULH0 1771 aa12.87□□□□□ -0.35
ATP2C1-204ENST00000428331 ARHGAP31Q2M1Z3 1444 aa12.87□□□□□ -0.35
ATP2C1-204ENST00000428331 PDIA4P13667 645 aaKnown RBP12.87□□□□□ -0.35
ATP2C1-204ENST00000428331 PDCP20941 246 aa12.87□□□□□ -0.35
ATP2C1-204ENST00000428331 CYP46A1Q9Y6A2 500 aa12.86□□□□□ -0.35
ATP2C1-204ENST00000428331 KRT85P78386 507 aa12.86□□□□□ -0.35
ATP2C1-204ENST00000428331 KIF1BPQ96EK5 621 aa12.86□□□□□ -0.35
ATP2C1-204ENST00000428331 NEXMIFQ5QGS0 1516 aa12.86□□□□□ -0.35
ATP2C1-204ENST00000428331 ATP10DQ9P241 1426 aa12.86□□□□□ -0.35
ATP2C1-204ENST00000428331 TTC21BQ7Z4L5 1316 aa12.86□□□□□ -0.35
ATP2C1-204ENST00000428331 CBX1P83916 185 aa12.86□□□□□ -0.35
ATP2C1-204ENST00000428331 GIMAP6Q6P9H5 292 aa12.86□□□□□ -0.35
ATP2C1-204ENST00000428331 ARHGEF28Q8N1W1 1705 aaKnown RBP12.86□□□□□ -0.35
ATP2C1-204ENST00000428331 F13A1P00488 732 aa12.85□□□□□ -0.35
ATP2C1-204ENST00000428331 CASTP20810 708 aaKnown RBP12.85□□□□□ -0.35
ATP2C1-204ENST00000428331 CWC27Q6UX04 472 aaKnown RBP12.85□□□□□ -0.35
ATP2C1-204ENST00000428331 CLASRPQ8N2M8 674 aaKnown RBP12.85□□□□□ -0.35
ATP2C1-204ENST00000428331 RGS12O14924 1447 aa12.85□□□□□ -0.35
ATP2C1-204ENST00000428331 SH2B1Q9NRF2 756 aaPredicted RBP12.85□□□□□ -0.35
ATP2C1-204ENST00000428331 PTPRMP28827 1452 aa12.85□□□□□ -0.35
ATP2C1-204ENST00000428331 HSP90AB2PQ58FF8 381 aa12.85□□□□□ -0.35
ATP2C1-204ENST00000428331 PDRG1Q9NUG6 133 aa12.85□□□□□ -0.35
ATP2C1-204ENST00000428331 CAMSAP1Q5T5Y3 1602 aa12.85□□□□□ -0.35
ATP2C1-204ENST00000428331 SYT1P21579 422 aa12.85□□□□□ -0.35
ATP2C1-204ENST00000428331 PPP4R3BQ5MIZ7 849 aa12.85□□□□□ -0.35
ATP2C1-204ENST00000428331 CCDC83Q8IWF9 413 aa12.85□□□□□ -0.35
ATP2C1-204ENST00000428331 SRGAP3O43295 1099 aa12.84□□□□□ -0.35
ATP2C1-204ENST00000428331 HSPA4P34932 840 aa12.84□□□□□ -0.35
ATP2C1-204ENST00000428331 MAP3K11Q16584 847 aa12.84□□□□□ -0.35
ATP2C1-204ENST00000428331 NGDNQ8NEJ9 315 aaKnown RBP12.84□□□□□ -0.35
ATP2C1-204ENST00000428331 TRIM5Q9C035 493 aa12.84□□□□□ -0.35
ATP2C1-204ENST00000428331 NUP62CLQ9H1M0 184 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms